Contig 011739:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN041F17Sequence600011739 (8)ref|XP_008361395.1|9e-60PREDICTED: CDPK-related protein kinase-like [Malus domestica]
JMFS015A03Sequence486011739 (8)
JMFS060D03Sequence613011739 (8)emb|CBI29399.3|4e-115unnamed protein product [Vitis vinifera]
JMSF008N08Sequence245000794 (5)757011739 (8)ref|XP_008361395.1|6e-86PREDICTED: CDPK-related protein kinase-like [Malus domestica]
JMSF028G09Sequence640000794 (5)ref|XP_006338215.1|1e-10PREDICTED: CDPK-related kinase 5-like [Solanum tuberosum]755011739 (8)emb|CBI29399.3|1e-17unnamed protein product [Vitis vinifera]
JMSF029B19Sequence635000794 (5)ref|XP_006338215.1|2e-06PREDICTED: CDPK-related kinase 5-like [Solanum tuberosum]735011739 (8)ref|XP_008361395.1|2e-78PREDICTED: CDPK-related protein kinase-like [Malus domestica]
JMSF031E04Sequence608000794 (5)ref|XP_009366775.1|8e-18PREDICTED: CDPK-related kinase 5-like [Pyrus x bretschneideri]776011739 (8)ref|XP_008361395.1|6e-72PREDICTED: CDPK-related protein kinase-like [Malus domestica]
JMSF044G05Sequence725000794 (5)ref|XP_006338215.1|1e-31PREDICTED: CDPK-related kinase 5-like [Solanum tuberosum]770011739 (8)ref|XP_008361395.1|1e-78PREDICTED: CDPK-related protein kinase-like [Malus domestica]

Alignment

This contig is upended


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JMFS060D03-                                                          AAAGAATGACCGC
                      ____________________________________________________________
consensus                                                            AAAGAATGACCGC
 
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JMFS060D03-           AGCTCAAGCCTTGTGCCATCCATGGATAAAAAGCTGTAATGACACGAAAGTGCCATTGGA
                      ____________________________________________________________
consensus             AGCTCAAGCCTTGTGCCATCCATGGATAAAAAGCTGTAATGACACGAAAGTGCCATTGGA
 
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JMFS060D03-           TATACTAATATTCAAACTCATGAAGGCTTACATGCGATCATCTGCTCTAAGGAAAGCTGC
                      ____________________________________________________________
consensus             TATACTAATATTCAAACTCATGAAGGCTTACATGCGATCATCTGCTCTAAGGAAAGCTGC
 
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JMFS060D03-           TTTACGGGCTTTATCCAAAACATTGACTGTGGACGAGCTTTTTTATTTGAAGGAGCAGTT
                      ____________________________________________________________
consensus             TTTACGGGCTTTATCCAAAACATTGACTGTGGACGAGCTTTTTTATTTGAAGGAGCAGTT
 
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JMFS060D03-           TGCTCTGCTAGAACCTAACAAAAATGGCACCATAAGTTTGGAAAATATAAAAACGGTCTT
rJMSF029B19+                                                 GGAAAATATAAAAACGGCCTT
rJMSF008N08+                       CCTAACAAAAATGGCACCATAAGTTTGGAAAATATAAAAACGGCCTT
rJMSF044G05+                                                 GGAAAATATAAAAACGGCCTT
rJMSF031E04+                                                 GGAAAATATAAAAACGGCCTT
                      ____________________________________________________________
consensus             TGCTCTGCTAGAACCTAACAAAAATGGCACCATAAGTTTGGAAAATATAAAAACGGCCTT
 
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JMFS060D03-           GATG-AAATATTCAACAGATGCCATGAAAGAGTCTCGTATCCATGATTTTCTTGCATCGC
rJMSF029B19+          GATG-AAATATTCAACAGATGCCATGAAAGAGTCTCGTATCCATGATTTTCTTGCATCGC
rJMSF008N08+          GATG-AAATATTCAACAGATGCCATGAAAGAGTCTCGTATCCATGATTTTCTTGCATCGC
rJMSF044G05+          GATG-AAATATTCAACAGATGCCATGAAAGAGTCTCGTATCCATGATTTTCTTGCATCGC
rJMSF031E04+          GATGAAAATATTCAACAGATGCCATGAAAGAGTCTCGTATCCATGATTTTCTTGCATCGC
                      ____________________________________________________________
consensus             GATG-AAATATTCAACAGATGCCATGAAAGAGTCTCGTATCCATGATTTTCTTGCATCGC
 
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JMFS060D03-           TTAATGCACTACAGTACAGGAGGATGGATTTTGAGGAATTCTGTGCAGCTGCGTTAAGCG
JMFN041F17-                  ACTACAGTACAGGAGGATGGATTTTGAGGAATTCTGTGCAGCTGCGTTAAGCG
rJMSF029B19+          TTAATGCACTACAGTACAGGAGGATGGATTTTGAGGAATTCTGTGCAGCTGCGTTAAGCG
rJMSF008N08+          TTAATGCACTACAGTACAGGAGGATGGATTTTGAGGAATTCTGTGCAGCTGCGTTAAGCG
rJMSF044G05+          TTAATGCACTACAGTACAGGAGGATGGATTTTGAGGAATTCTGTGCAGCTGCGTTAAGCG
rJMSF031E04+          TTAATGCACTACAGTACAGGAGGATGGATTTTGAGGAATTCTGTGCAGCTGCGTTAAGCG
                      ____________________________________________________________
consensus             TTAATGCACTACAGTACAGGAGGATGGATTTTGAGGAATTCTGTGCAGCTGCGTTAAGCG
 
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JMFS060D03-           TCCATCAGCTCGAGGCTCTTGATCGATGGGAACAACATGCACGATGTGCCTATGAAATCT
JMFN041F17-           TCCATCAGCTCGAAGCTCTTGATCGATGGGAACAACATGCACGATGTGCCTATGAAATCT
rJMSF029B19+          TCCATCAGCTCGAGGCTCTTGATCGATGGGAACAACATGCACGATGTGCCTATGAAATCT
rJMSF008N08+          TCCATCAGCTCGAGGCTCTTGATCGATGGGAACAACATGCACGATGTGCCTATGAAATCT
rJMSF044G05+          TCCATCAGCTCGAGGCTCTTGATCGATGGGAACAACATGCACGATGTGCCTATGAAATCT
rJMSF031E04+          TCCATCAGCTCGAGGCTCTTGATCGATGGGAACAACATGCACGATGTGCCTATGAAATCT
                      ____________________________________________________________
consensus             TCCATCAGCTCGAGGCTCTTGATCGATGGGAACAACATGCACGATGTGCCTATGAAATCT
 
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JMFS060D03-           TCGAAAAGGATGGAAATAGGGCCATAGTCATCGAAGAATTAGCTTCGGAACTTGGTCTTG
JMFN041F17-           TCGAAAAGGATGGAAATAGGGCCATAGTCATCGAAGAATTAGCTTCGGAACTTGGTCTTG
rJMSF029B19+          TCGAAAAGGATGGAAATAGGGCCATAGTCATCGAAGAATTAGCTTCGGAACTTGGTCTTG
rJMSF008N08+          TCGAAAAGGATGGAAATAGGGCCATAGTCATCGAAGAATTAGCTTCGGAACTTGGTCTTG
rJMSF044G05+          TCGAAAAGGATGGAAATAGGGCCATAGTCATCGAAGAATTAGCTTCGGAACTTGGTCTTG
rJMSF031E04+          TCGAAAAGGATGGAAATAGGGCCATAGTCATCGAAGAATTAGCTTCGGAACTTGGTCTTG
rJMSF028G09+                                                        GGAACTTGGTCTTG
                      ____________________________________________________________
consensus             TCGAAAAGGATGGAAATAGGGCCATAGTCATCGAAGAATTAGCTTCGGAACTTGGTCTTG
 
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JMFS060D03-           GCCCTTCCGTTCCTTTGCACGCCGTTCTCCACGACTGGATCAGGCACACCGACGGAAAGC
JMFN041F17-           GCCCTTCCGTTCCTTTGCACGCCGTTCTCCACGACTGGATCAGGCACACCGACGGAAAGC
rJMSF029B19+          GCCCTTCCGTTCCTTTGCACGCCGTTCTCCACGACTGGATCAGGCACACCGACGGAAAGC
rJMSF008N08+          GCCCTTCCGTTCCTTTGCACGCCGTTCTCCACGACTGGATCAGGCACACCGACGGAAAGC
rJMSF044G05+          GCCCTTCCGTTCCTTTGCACGCCGTTCTCCACGACTGGATCAGGCACACCGACGGAAAGC
rJMSF031E04+          GCCCTTCCGTTCCTTTGCACGCCGTTCTCCACGACTGGATCAGGCACACCGACGGAAAGC
rJMSF028G09+          GCCCTTCCGTTCCTTTGCACGCCGTTCTCCACGACTGGATCAGGCACACCGACGGAAAGC
JMFS015A03-                                                                 GAAAGC
                      ____________________________________________________________
consensus             GCCCTTCCGTTCCTTTGCACGCCGTTCTCCACGACTGGATCAGGCACACCGACGGAAAGC
 
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JMFS060D03-           TAAGTTTCCTAGGATTCGCCAAATTGTTGCACGGCGTGTCAAGTCGCACGGCTGCAAA  
JMFN041F17-           TAAGTTTCCTAGGATTCGCCAAATTGTTGCACGGCGTGTCAAGTCGCACGGCTGCAAAGG
rJMSF029B19+          TAAGTTTCCTAGGATTCGCCAAATTGTTGCACGGCGTGTCAAGTCGCACGGCTGCAAAGG
rJMSF008N08+          TAAGTTTCCTAGGATTCGCCAAATTGTTGCACGGCGTGTCAAGTCGCACGGCTGCAAAGG
rJMSF044G05+          TAAGTTTCCTAGGATTCGCCAAATTGTTGCACGGCGTGTCAAGTCGCACGGCTGCAAAGG
rJMSF031E04+          TAAGTTTCCTAGGATTCGCCAAATTGTTGCACGGCGTGTCAAGTCGCACGGCTGCAAAGG
rJMSF028G09+          TAAGTTTCCTAGGATTCGCCAAATTGTTGCACGGCGTGTCAAGTCGCACGGCTGCAAAGG
JMFS015A03-           TAAGTTTCCTAGGATTCGCCAAATTGTTGCACGGCGTGTCAAGTTGCACGGCTGCAAAGG
                      ____________________________________________________________
consensus             TAAGTTTCCTAGGATTCGCCAAATTGTTGCACGGCGTGTCAAGTCGCACGGCTGCAAAGG
 
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JMFN041F17-           TCCAATGACACTCCACACGCCCGCCTACTAGGCTCGATCATCATCACCCTTTAGCTACTT
rJMSF029B19+          TCCAATGACACTCCACACGCCCGCCTACTAGGCTCGATCATCATCACCCTTTAGCTACTT
rJMSF008N08+          TCCAATGACACTCCACACGCCCGCCTACTAGGCTCGATCATCATCACCCTTTAGCTACTT
rJMSF044G05+          TCCAATGACACTCCACACGCCCGCCTACTAGGCTCGATCATCATCACCCTTTAGCTACTT
rJMSF031E04+          TCCAATGACACTCCACACGCCCGCCTACTAGGCTCGATCATCATCACCCTTTAGCTACTT
rJMSF028G09+          TCCAATGACACTCCACACGCCCGCCTACTAGGCTCGATCATCATCACCCTTTAGCTACTT
JMFS015A03-           TCCAATGACACTCCACACGCCCGCCTACTAGGCTCGATCATCATCACCCTTTAGCTACTT
                      ____________________________________________________________
consensus             TCCAATGACACTCCACACGCCCGCCTACTAGGCTCGATCATCATCACCCTTTAGCTACTT
 
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JMFN041F17-           CTTTCTCCTCGGAGCTGATAAGAGGCGACTAACATGAGTTGCGGTCCATCATCTCCCTCC
rJMSF029B19+          CTTTCTCCTCGGAGCTGATAAGAGGCGACTAACATGAGTTGCGGTCCATCATCTCCCTCC
rJMSF008N08+          CTTTCTCCTCGGAGCTGATAAGAGGCGACTAACATGAGTTGCGGTCCATCATCTCCCTCC
rJMSF044G05+          CTTTCTCCTCGGAGCTGATAAGAGGCGACTAACATGAGTTGCGGTCCTTCATCTCCCTCC
rJMSF031E04+          CTTTCTCCTCGGAGCTGATAAGAGGCGACTAACATGAGTTGCGGTCCATCATCTCCCTCC
rJMSF028G09+          CTTTCTCCTCGGAGCTGATAAGAGGCGACTAACATGAGTTGCGGTCCATCATCTCCCTCC
JMFS015A03-           CTTTCTCCTCGGAGCTGATAAGAGGCGACTAACATGAGTTGCGGTCCATCATCTCCCTCC
                      ____________________________________________________________
consensus             CTTTCTCCTCGGAGCTGATAAGAGGCGACTAACATGAGTTGCGGTCCATCATCTCCCTCC
 
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JMFN041F17-           ACAAACACTTGCAGTGGGCGCCCACCACCGCGACGAAATATCCAGATTGTGAGTACACCG
rJMSF029B19+          ACAAACACTTGCAGTGGGCGCCCACCACCGCGACGAAATATCCAGATTGTGAGTACACCG
rJMSF008N08+          ACAAACACTTGCAGTGGGCGCCCACCACCGCGACGAAATATCCAGATTGTGAGTACACCG
rJMSF044G05+          ACAAACACTTGCAGTGGGCGCCCACCACCGCGACGAAATATCCAGATTGTGAGTACACCG
rJMSF031E04+          ACAAACACTTGCAGTGGGCGCCCACCACCGCGACGAAATATCCAGATTGTGAGTACACCG
rJMSF028G09+          ACAAACACTTGCAGTGGGCGCCCACCACCGCGACGAAATATCCAGATTGTGAGTACACCG
JMFS015A03-           ACAAACACTTGCAGTGGGCGCCCACCACCGCGACGAAATATCCAGATTGTGAGTACACCG
                      ____________________________________________________________
consensus             ACAAACACTTGCAGTGGGCGCCCACCACCGCGACGAAATATCCAGATTGTGAGTACACCG
 
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JMFN041F17-           ATCTCGCTCCTGCCTATTTATTCTCAGAATACGCGATGCAGCCATTGTTTTCCACTTCCG
rJMSF029B19+          ATCTCGCTCCTGCCTATTTATTCTCAGAATACGCGATGCAGCCATTGTTTTCCACTTCCG
rJMSF008N08+          ATCTCGCTCCTGCCTATTTATTCTCAGAATACGCGATGCAGCCATTGTTTTCCACTTCCG
rJMSF044G05+          ATCTCGCTCCTGCCTATTTATTCTCAGAATACGCGATGCAGCCATTGTTTTCCACTTCCG
rJMSF031E04+          ATCTCGCTCCTGCCTATTTATTCTCAGAATACGCGATGCAGCCATTGTTTTCCACTTCCG
rJMSF028G09+          ATCTCGCTCCTGCCTATTTATTCTCAGAATACGCGATGCAGCCATTGTTTTCCACTTCCG
JMFS015A03-           ATCTCGCTCCTGCCTATTTATTCTCAGAATACGCGATGCAGCCATTGTTTTCCACTTCCG
                      ____________________________________________________________
consensus             ATCTCGCTCCTGCCTATTTATTCTCAGAATACGCGATGCAGCCATTGTTTTCCACTTCCG
 
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JMFN041F17-           CCAACGAGAACAGCGCGATAATGCTCTCTCGTACGAAGGCCATAGTTGTGTTGTTTGATT
rJMSF029B19+          CCAACGAGAACAGCGCGATAATGCTCTCTCGTACGAAGGCCATAGTTGTGTTGTTTGATT
rJMSF008N08+          CCAACGAGAACAGCGCGATAATGCTCTCTCGTACGAAGGCCATAGTTGTGTTGTTTGATT
rJMSF044G05+          CCAACGAGAACAGCGCGATAATGCTCTCTCGTACGAAGGCCATAGTTGTGTTGTTTGATT
rJMSF031E04+          CCAACGAGAACAGCGCGATAATGCTCTCTCGTACGAAGGCCATAGTTGTGTTGTTTGATT
rJMSF028G09+          CCAACGAGAACAGCGCGATAATGCTCTCTCGTACGAAGGCCATAGTTGTGTTGTTTGATT
JMFS015A03-           CCAACGAGAACAGCGCGATAATGCTCTCTCGTACGAAGGCCATAGTTGTGTTGTTTGATT
                      ____________________________________________________________
consensus             CCAACGAGAACAGCGCGATAATGCTCTCTCGTACGAAGGCCATAGTTGTGTTGTTTGATT
 
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JMFN041F17-           TGTTTCT                                                     
rJMSF029B19+          TGTTTCTGTGAGTAATTTTCTCAGCTGGTTAGTGGACAACCATA                
rJMSF008N08+          TGTTTCTGTGAGTAATTTTCTCAGCTGGTTAGTGGACAACCATACAAGATG         
rJMSF044G05+          TGTTTCTGTGAGTAATTTTCTCAGCTGGTTAGTGGACAACCATACAAGATGTTCTAACAA
rJMSF031E04+          TGTTTCTGTGAGTAATTTTCTCAGCTGGTTAGTGGACAACCATACAAGATGTTCTAACAA
rJMSF028G09+          TGTTTCTGTGAGTAATTTTCTCAGCTGGTTAGTGGACAACCATACAAGATGTTCTAACAA
JMFS015A03-           TGTTTCTGTGAGTAATTTTCTCAGCTGGTTAGTGGACAACCATACAAGATGTTCTAACAA
                      ____________________________________________________________
consensus             TGTTTCTGTGAGTAATTTTCTCAGCTGGTTAGTGGACAACCATACAAGATGTTCTAACAA
 
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rJMSF044G05+          CAGTAACCCTAT                                                
rJMSF031E04+          CAGTAACCCTATTGGACTGCCCT                                     
rJMSF028G09+          CAGTAACCCTATTGGACTGCCCTTACGCCATCAATTGTCTCTATCGTCG           
JMFS015A03-           CAGTAACCCTATTGGACTGCCCTTACGCCATCAATTGTCTCTATCGTCGTAATCTTTCAG
                      ____________________________________________________________
consensus             CAGTAACCCTATTGGACTGCCCTTACGCCATCAATTGTCTCTATCGTCGTAATCTTTCAG