Contig 011738:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFS011E12Sequence596011738 (9)ref|XP_009602385.1|3e-38PREDICTED: protein transport protein Sec31A [Nicotiana tomentosiformis]
JMFS038C02Sequence609011738 (9)ref|XP_009790867.1|1e-86PREDICTED: protein transport protein Sec31A-like [Nicotiana sylvestris]
JMFS045F06Sequence551011738 (9)ref|XP_009602385.1|9e-45PREDICTED: protein transport protein Sec31A [Nicotiana tomentosiformis]
JMFS056E01Sequence627011738 (9)ref|XP_009602385.1|8e-62PREDICTED: protein transport protein Sec31A [Nicotiana tomentosiformis]
JMFS094G01Sequence613011738 (9)ref|XP_009790867.1|4e-55PREDICTED: protein transport protein Sec31A-like [Nicotiana sylvestris]
JMFS163C03Sequence611011738 (9)ref|XP_009602385.1|2e-57PREDICTED: protein transport protein Sec31A [Nicotiana tomentosiformis]
JMSF003D16Sequence251011738 (9)664011258 (4)gb|KDO83288.1|6e-68hypothetical protein CISIN_1g0464512mg, partial [Citrus sinensis]
JMSF017L05Sequence554011738 (9)ref|XP_009602385.1|3e-40PREDICTED: protein transport protein Sec31A [Nicotiana tomentosiformis]712011258 (4)emb|CDP18776.1|7e-73unnamed protein product [Coffea canephora]
JMSF046K24Sequence515013536 (8)705011738 (9)ref|XP_010659215.1|1e-26PREDICTED: protein transport protein SEC31 homolog B isoform X1 [Vitis vinifera

Alignment

This contig is upended


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rJMSF046K24-                 AATTCAACCAACTCAACAAGATGGAATTGGAGAAGCAGTTCTCTAAATGCACC
                      ____________________________________________________________
consensus                    AATTCAACCAACTCAACAAGATGGAATTGGAGAAGCAGTTCTCTAAATGCACC
 
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rJMSF046K24-          AAATTCTTGGTTATACATTAGAAATGCTTTTCAAAAAAATAAACATTAGAGATGCTAAAT
                      ____________________________________________________________
consensus             AAATTCTTGGTTATACATTAGAAATGCTTTTCAAAAAAATAAACATTAGAGATGCTAAAT
 
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rJMSF046K24-          AATCACATCTTCACAGAGCTTCACTCTTTGGTATGCCCCGTAAGCTCTTTCACTGGAGAC
                      ____________________________________________________________
consensus             AATCACATCTTCACAGAGCTTCACTCTTTGGTATGCCCCGTAAGCTCTTTCACTGGAGAC
 
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rJMSF046K24-          ATTGTATTTCGCATATCCCACATCCTCAATGCATGTGAAGTATCTTCATCAGAGGCAACT
                      ____________________________________________________________
consensus             ATTGTATTTCGCATATCCCACATCCTCAATGCATGTGAAGTATCTTCATCAGAGGCAACT
 
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rJMSF046K24-          ACAAGTTGAGTGGCAACATCAGGATTCTAATAGAATTTGAGAATCTGAGAAACTTATCAC
                      ____________________________________________________________
consensus             ACAAGTTGAGTGGCAACATCAGGATTCTAATAGAATTTGAGAATCTGAGAAACTTATCAC
 
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rJMSF046K24-          AGGTTTTTGATTCCTCAGATCCCAAACCACTAGAGAAATAGAAAAGGAAAATAAAATTTT
                      ____________________________________________________________
consensus             AGGTTTTTGATTCCTCAGATCCCAAACCACTAGAGAAATAGAAAAGGAAAATAAAATTTT
 
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rJMSF046K24-          AAGATTAAAAGGCAATTTTTTCAAACTTCAAATGGAGACTAGTGCATCCTTCAGCTGACT
                      ____________________________________________________________
consensus             AAGATTAAAAGGCAATTTTTTCAAACTTCAAATGGAGACTAGTGCATCCTTCAGCTGACT
 
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rJMSF046K24-          TCTTGCTGACCAGTTGTGCCATTTGATGATGTGGACGCCAATATCTGTTGAACCTTTCTA
JMFS038C02+                     CAGTTGTGCCATTTGATGATGTGNACGCCAATATCTGCTGAACCTTTCTA
                      ____________________________________________________________
consensus             TCTTGCTGACCAGTTGTGCCATTTGATGATGTGGACGCCAATATCTGTTGAACCTTTCTA
 
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rJMSF046K24-          TTCCATGACATATATGAAAATTCATTTTGGGTTGCTGATCCACTACCCTTC         
JMFS038C02+           TTCCACGATATATATGAAATTTCATTTTGGGTTGCTGATCCACTACCCTTCAAAGGAGGA
                      ____________________________________________________________
consensus             TTCCATGATATATATGAAATTTCATTTTGGGTTGCTGATCCACTACCCTTCAAAGGAGGA
 
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JMFS038C02+           AAATGGGTAGGTTCTGCTGAATTTGAAATATCCCAGATACAGATTTCACCATCATCAGCC
JMFS163C03+                                               ATACAGATTTCACCATCATCAGCC
JMFS056E01+                                    AAATATCCCAGATACAGATTTCACCATCATCAGCC
JMFS094G01+                                                            CATCATCAGCC
                      ____________________________________________________________
consensus             AAATGGGTAGGTTCTGCTGAATTTGAAATATCCCAGATACAGATTTCACCATCATCAGCC
 
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JMFS038C02+           CCAGAAGCAAGGAGATTTGGAGTGAAAACATTAAATTCCAAACCATGAACAGGCCCACTA
JMFS045F06+                                               TCCAAACCATGAACAGGCNCACTA
JMFS163C03+           CCAGAAGCAAGGAGATTTGGAGTGAAAACATTANATTCCAAACCATGAACAGGCCCACTA
JMFS056E01+           CCAGAAGCAAGGAGATTTGGAGTGAAAACATTAAATTCCAAACCATGAACAGGCCCACTA
JMFS094G01+           CCAGAAGCAAGGAGATTTGGAGTGAAAACATTAAATTCCAAACCATGAACAGGCCCACTA
                      ____________________________________________________________
consensus             CCAGAAGCAAGGAGATTTGGAGTGAAAACATTAAATTCCAAACCATGAACAGGCCCACTA
 
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JMFS038C02+           TGTTTTGAAAGATGACCAAGAAATGCATTTTCAGTAACCTTGCCACCTTCTTGGTTTGCA
JMFS045F06+           TGTTTTGAAAGATGACCAAGAAATGCATTTTCAGTAACCTTGCCACCTTCTTGGTTTGCA
JMFS163C03+           TGTTTTGAAAGATGACCAAGAAATGCATTTTCAGTAACCTTGCCACCTTCTTGGTTTGCA
JMFS056E01+           TGTTTTGAAAGATGACCAAGAAATGCATTTTCAGTAACCTTGCCACCTTCTTGGTTTGCA
JMFS094G01+           TGTTTTGAAAGATGACCAAGAAATGCATTTTCAGTAACCTTGCCACCTTCTTGGTTTGCA
JMSF017L05+                 GAAAGATGACCAAGAAATGCATTTTCAGTAACCTTGCCACCTTCTTGGTTTGCA
                      ____________________________________________________________
consensus             TGTTTTGAAAGATGACCAAGAAATGCATTTTCAGTAACCTTGCCACCTTCTTGGTTTGCA
 
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JMFS038C02+           ATAGAGGAGATCAGAACCCTTGGATTCCACATTCCAATGTTTCCATCAACAAGCCCACCA
JMFS045F06+           ATAGAGGAGATCAGAACCCTTGGATTCCACATTCCAATGTTTCCATCAACAAGCCCACCA
JMFS163C03+           ATAGAGGAGATCAGAACCCTTGGATTCCACATTCCAATGTTTCCATCAACAAGCCCACCA
JMFS056E01+           ATAGAGGAGATCAGAACCCTTGGATTCCACATTCCAATGTTTCCATCAACAAGCCCACCA
JMFS094G01+           ATAGAGGAGATCAGAACCCTTGGATTCCACATTCCAATGTTTCCATCAACAAGCCCACCA
JMSF017L05+           ATAGAGGAGATCAGAACCCTTGGATTCCACATTCCAATGTTTCCATCAACAAGCCCACCA
JMFS011E12+               AGGAGATCAGAACCCTTGGATTCCACATTCCAATGTTTCCATCAACAAGCCCACCA
                      ____________________________________________________________
consensus             ATAGAGGAGATCAGAACCCTTGGATTCCACATTCCAATGTTTCCATCAACAAGCCCACCA
 
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JMFS038C02+           GCAACGATACCAAGTGGGAACTGCTCAGAATTCGCGGGAGACTTCCCCCAAGAAAGCCTG
JMFS045F06+           GCAACGATACCAAGTGGGAACTGCTCAGAATTCGCGGGAGACTTCCCCCAAGAAAGCCTG
JMFS163C03+           GCAACGATACCAAGTGGGAACTGCTCAGAATTCGCGGGAGACTTCCCCCAAGAAAGCCTG
JMFS056E01+           GCAACGATACCAAGTGGGAACTGCTCAGAATTCGCGGGAGACTTCCCCCAAGAAAGCCTG
JMFS094G01+           GCAACGATACCAAGTGGGAACTGCTCAGAATTCGCGGGAGACTTCCCCCAAGAAAGCCTG
JMSF017L05+           GCAACGATACCAAGTGGGAACTGCTCAGAATTCGCGGGAGACTTCCCCCAAGAAAGCCTG
JMFS011E12+           GCAACGATACCAAGTGGGAACTGCTCAGAATTCGCGGGAGACTTCCCCCAAGAAAGCCTG
                      ____________________________________________________________
consensus             GCAACGATACCAAGTGGGAACTGCTCAGAATTCGCGGGAGACTTCCCCCAAGAAAGCCTG
 
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JMFS038C02+           GTAAACCGCTCGGAGCTGGCCACCGAGCCGGCCAAGATGAGCTGGCGGTCATCCGATGCG
JMFS045F06+           GTAAACCGCTCGGAGCTGGCCACCGAGCCGGCCAAGATGAGCTGGCGGTCATCCGATGCG
JMFS163C03+           GTAAACCGCTCGGAGCTGGCCACCGAGCCGGCCAAGATGAGCTGGCGGTCATCCGATGCG
JMFS056E01+           GTAAACCGCTCGGAGCTGGCCACCGAGCCGGCCAAGATGAGCTGGCGGTCATCCGATGCG
JMFS094G01+           GTAAACCGCTCGGAGCTGGCCACCGAGCCGGCCAAGATGAGCTGGCGGTCATCCGATGCG
JMSF017L05+           GTAAACCGCTCGGAGCTGGCCACCGAGCCGGCCAAGATGAGCTGGCGGTCATCCGATGCG
JMFS011E12+           GTAAACCGCTCGGAGCTGGCCACCGAGCCGGCCAAGATGAGCTGGCGGTCATCCGATGCG
                      ____________________________________________________________
consensus             GTAAACCGCTCGGAGCTGGCCACCGAGCCGGCCAAGATGAGCTGGCGGTCATCCGATGCG
 
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JMFS038C02+           AAGTCAAGCTGGAAAATGTCAAGATTGGCCGTCGAGCTGAATGACAGATCCACCGCCCCC
JMFS045F06+           AAGTCAAGCTGGAAAATGTCAAGATTGGCCGTCGAGCTGAATGACAGATCCACCGCCCCC
JMFS163C03+           AAGTCAAGCTGGAAAATGTCAAGATTGGCCGTCGAGCTGAATGACAGATCCACCGCCCCC
JMFS056E01+           AAGTCAAGCTGGAAAATGTCAAGATTGGCCGTCGAGCTGAATGACAGATCCACCGCCCCC
JMFS094G01+           AAGTCAAGCTGGAAAATGTCAAGATTGGCCGTCGAGCTGAATGACAGATCCACCGCCCCC
JMSF017L05+           AAGTCAAGCTGGAAAATGTCAAGATTGGCCGTCGAGCTGAATGACAGATCCACCGCCCCC
JMFS011E12+           AAGTCAAGCTGGAAAATGTCAAGATTGGCCGTCGAGCTGAATGACAGATCCACCGCCCCC
                      ____________________________________________________________
consensus             AAGTCAAGCTGGAAAATGTCAAGATTGGCCGTCGAGCTGAATGACAGATCCACCGCCCCC
 
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JMFS038C02+           GCCATAGTCCCGGCAGCCAAGTACGGCGCTTCCGGCGCGAAGGCCGCCAGCGCCAATCTG
JMFS045F06+           GCCATAGTCCCGGCAGCCAAGTACGGCGCTTCCGGCGCGAAGGCCGCCAGCGCCAATCTG
JMFS163C03+           GCCATAGTCCCGGCAGCCAAGTACGGCGCTTCCGGCGCGAAGGCCGCCAGCGCCAATCTG
JMFS056E01+           GCCATAGTCCCGGCAGCCAAGTACGGCGCTTCCGGCGCGAAGGCCGCCAGCGCCAATCTG
JMFS094G01+           GCCATAGTCCCGGCAGCCAAGTACGGCGCTTCCGGCGCGAAGGCCGCCAGCGCCAATCTG
JMSF003D16+                  TCCCGGCAGCCANGTACGGCGCTTCCGGCGCGAAGGCCGCCAGCGCCAATCTG
JMSF017L05+           GCCATAGTCCCGGCAGCCAAGTACGGCGCTTCCGGCGCGAAGGCCGCCAGCGCCAATCTG
JMFS011E12+           GCCATAGTCCCGGCAGCCAAGTACGGCGCTTCCGGCGCGAAGGCCGCCAGCGCCAATCTG
                      ____________________________________________________________
consensus             GCCATAGTCCCGGCAGCCAAGTACGGCGCTTCCGGCGCGAAGGCCGCCAGCGCCAATCTG
 
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JMFS038C02+           TTCA                                                        
JMFS045F06+           TTCACCATCTTTACAGACGCCATCGTGGAGCAATGAATCGAACCCTGCCACAAATACCTC
JMFS163C03+           TTCACCATCTTTACAGACGCCATCGTGGAGCAATGAATCGAACCCTGCCACAAATACCTC
JMFS056E01+           TTCACCATCTTTACAGACGCCATCGTGGAGCAATGAATCGAACCCTGCCACAAATACCTC
JMFS094G01+           TTCACCATCTTTACAGACGCCATCGTGGAGCAATGAATCGAACCCTGCCACAAATACCTC
JMSF003D16+           TTCACCATCTTTACAGACGCCATCGTGGAGCAATGAATCGAACCCTGCCACAAATACCTC
JMSF017L05+           TTCACCATCTTTACAGACGCCATCGTGGAGCAATGAATCGAACCCTGCCACAAATACCTC
JMFS011E12+           TTCACCATCTTTACAGACGCCATCGTGGAGCAATGAATCGAACCCTGCCACAAATACCTC
                      ____________________________________________________________
consensus             TTCACCATCTTTACAGACGCCATCGTGGAGCAATGAATCGAACCCTGCCACAAATACCTC
 
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JMFS045F06+           CCCTATATATAAACGTAACAAATAAATACAGTATTGCTGGGTCTACAACTACAGTAACAA
JMFS163C03+           CCCTATATATAAACGTAACAAATAAATACAGTATTGCTGGGTCTACAACTACAGTAACAA
JMFS056E01+           CCCTATATATAAACGTAACAAATAAATACAGTATTGCTGGGTCTACAACTACAGTAACAA
JMFS094G01+           CCCTATATATAAACGTAACAAATAAATACAGTATTGCTGGGTCTACAACTACAGTAACAA
JMSF003D16+           CCCTATATATAAACGTAACAAATAAATACAGTATTGCTGGGTCTACAACTACAGTAACAA
JMSF017L05+           CCCTATATATAAACGTAACAAATAAATACAGTATTGCTGGGTCTACAACTACAGTAACAA
JMFS011E12+           CCCTATATATAAACGTAACAAATAAATACAGTATTGCTGGGTCTACAACTACAGTAACAA
                      ____________________________________________________________
consensus             CCCTATATATAAACGTAACAAATAAATACAGTATTGCTGGGTCTACAACTACAGTAACAA
 
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JMFS045F06+           CACTGGATTCAGGGTTAGGGTTTTGGGAAGTGGAGAAATTCACATGA             
JMFS163C03+           CACTGGATTCAGGGTTAGGGTTTTGGGAAGTGGAGAAATTCACATGA             
JMFS056E01+           CACTGGATTCAGGGTTAGGGTTTTGGGAAGTGGAGAAATTCACATGAGAAGA        
JMFS094G01+           CACTGGATTCAGGGTTAGGGTTTTGGGAAGTGGAGAAATTCACATGAGAAGAGGGAACAA
JMSF003D16+           CACTGGATTCAGGGTTAGGGTTTTGGGAAGTGGAGAAATTCACATGAGAAGAGGGAACAA
JMSF017L05+           CACTGGATTCAGGGTTAGGGTTTTGGGAAGTGGAGAAATTCACATGAGAAGAGGGAACAA
JMFS011E12+           CACTGGATTCAGGGTTAGGGTTTTGGGAAGTGGAGAAATTCACATGAGAAGAGGGAACAA
                      ____________________________________________________________
consensus             CACTGGATTCAGGGTTAGGGTTTTGGGAAGTGGAGAAATTCACATGAGAAGAGGGAACAA
 
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JMFS094G01+           GA                                                          
JMSF003D16+           GATGGAGAGAAGAGAG                                            
JMSF017L05+           GATGGAGAGAAGAGAG                                            
JMFS011E12+           GATGGAGAGAAGAGAGTGTGGAGAGCCAATTGTTAATTGGATTTTTGTATATAGATTTTT
                      ____________________________________________________________
consensus             GATGGAGAGAAGAGAGTGTGGAGAGCCAATTGTTAATTGGATTTTTGTATATAGATTTTT
 
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JMFS011E12+           ACTGTCTCTTTCCTCTGTAAGAATCAGTACTTCTTCCGGTTTGACTTGAGAAGAGAGGAA
                      ____________________________________________________________
consensus             ACTGTCTCTTTCCTCTGTAAGAATCAGTACTTCTTCCGGTTTGACTTGAGAAGAGAGGAA