Contig 011732:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018G10Sequence532011732 (5)emb|CDP00466.1|1e-36unnamed protein product [Coffea canephora]
JMFF044J13Sequence457011732 (5)emb|CDP00466.1|7e-37unnamed protein product [Coffea canephora]601011732 (5)emb|CDP00466.1|4e-36unnamed protein product [Coffea canephora]
JMFN034H12Sequence531011732 (5)emb|CDP00466.1|6e-36unnamed protein product [Coffea canephora]
JMFN046N19Sequence560011732 (5)emb|CDP00466.1|6e-16unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF018G10+                                                                 AANNN
                      ____________________________________________________________
consensus                                                                    AANNN
 
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JMFF044J13-                           TGAAAACCACAACAGATCTAGAGAGATGGGGTTTGATGATGTGA
rJMFF018G10+          NNNNAAAAAAANCAAGTGAAAACCACAACAGATCTAGAGAGATGGGGTTTGATGATGTGA
JMFN034H12-                           TGAAAACCACAACAGATCTAGAGAGATGGGGTTTGATGATGTGA
rJMFF044J13+                                             AGAGAGATGGGGTTTGATGATGTGA
                      ____________________________________________________________
consensus             NNNNAAAAAAANCAAGTGAAAACCACAACAGATCTAGAGAGATGGGGTTTGATGATGTGA
 
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JMFF044J13-           TGAATTTTGTGGTGGAGAAGCTGAAAGAGTTCCTCCAAACCATACAAAATCTGGGCGGAG
rJMFF018G10+          TGAATTTTGTGGTGGAGAAGCTGAAAGAGTTCCTCCAAACCATACAAAATCTGGGCGGAG
JMFN034H12-           TGAATTTTGTGGTGGAGAAGCTGAAAGAGTTCCTCCAAACCATACAAAATCTGGGCGGAA
rJMFF044J13+          TGAATTTTGTGGTGGAGAAGCTGAAAGAGTTCCTCCAAACCATACAAAATCTGGGCGGAG
                      ____________________________________________________________
consensus             TGAATTTTGTGGTGGAGAAGCTGAAAGAGTTCCTCCAAACCATACAAAATCTGGGCGGAG
 
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JMFF044J13-           AAGCCCTTCAGTGGTTCGACCAAATCTTTCCGCCGGAGACCAGAGAAGATACCATCATCC
rJMFF018G10+          AAGCCCTTCAGTGGTTCGACCAAATCTTTCCGCCGGAGACCAGAGAAGATACCATCATCC
JMFN034H12-           AAGCCCTTCAGTGGTTCGACCAAATCTTTCCGCCGGAGACCAGAGAAGATACCATCATCC
rJMFF044J13+          AAGCCCTTCAGTGGTTCGACCAAATCTTTCCGCCGGAGACCAGAGAAGATACCATCATCC
JMFN046N19+                                                   CAGAGAAGATACCATCATCC
                      ____________________________________________________________
consensus             AAGCCCTTCAGTGGTTCGACCAAATCTTTCCGCCGGAGACCAGAGAAGATACCATCATCC
 
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JMFF044J13-           ACTGGTTCCAAGTCGCCCTCCCCTTCCTCATCGCCGCCGTGGTCCTCACCCTCCTCATCT
rJMFF018G10+          ACTGGTTCCAAGTCGCCCTCCCCTTCCTCATCGCCGCCGTGGTCCTCACCCTCCTCATCT
JMFN034H12-           ACTGGTTCCAAGTCGCCCTCCCCTTCCTCATCGCCGCCGTGGTCCTCACCCTCCTCATCT
rJMFF044J13+          ACTGGTTCCAAGTCGCCCTCCCCTTCCTCATCGCCGCCGTGGTCCTCACCCTCCTCATCT
JMFN046N19+           ACTGGTTCCAAGTCGCCCTCCCCTTCCTCATCGCCGCCGTGGTCCTCACCCTCCTCATCT
                      ____________________________________________________________
consensus             ACTGGTTCCAAGTCGCCCTCCCCTTCCTCATCGCCGCCGTGGTCCTCACCCTCCTCATCT
 
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JMFF044J13-           GCTGCTGCCGCTGCTGCTGCTGTGGAGGCGGCGGCCGGCGGCGGATGATGAAAGCTCCGG
rJMFF018G10+          GCTGCTGCCGCTGCTGCTGCTGTGGAGGCGGCGGCCGGCGGCGGATGATGAAAGCTCCGG
JMFN034H12-           GCTGCTGCCGCTGCTGCTGCTGTGGAGGCGGCGGCCGGCGGCGGATGATGAAAGCTCCGG
rJMFF044J13+          GCTGCTGCCGCTGCTGCTGCTGTGGAGGCGGCGGCCGGCGGCGGATGATGAAAGCTCCGG
JMFN046N19+           GCTGCTGCCGCTGCTGCTGCTGTGGAGGCGGCGGCCGGCGGCGGATGATGAAAGCTCCGG
                      ____________________________________________________________
consensus             GCTGCTGCCGCTGCTGCTGCTGTGGAGGCGGCGGCCGGCGGCGGATGATGAAAGCTCCGG
 
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JMFF044J13-           GGAGGAACTGCAGGATGCCCAGAGATGTGTTTGAGGCCAACACCAGATCCTACTTCAGGA
rJMFF018G10+          GGAGGAACTGCAGGATGCCCAGAGATGTGTTTGAGGCCAACACCAGATCCTACTTCAGGA
JMFN034H12-           GGAGGAACTGCAGGATGCCCAAAGATGTGTTTGAGGCCAACACCAGATCCTACTTCAGGA
rJMFF044J13+          GGAGGAACTGCAGGATGCCCAGAGATGTGTTTGAGGCCAACACCAGATCCTACTTCAGGA
JMFN046N19+           GGAGGAACTGCAGGATGCCCAGAGATGTGTTTGAGGCCAACACCAGATCCTACTTCAGGA
                      ____________________________________________________________
consensus             GGAGGAACTGCAGGATGCCCAGAGATGTGTTTGAGGCCAACACCAGATCCTACTTCAGGA
 
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JMFF044J13-           ACCTCCGCGCGCATCCTGGCGATCAACTCGTGTGATAAATCCGACATCTATCTATCAATC
rJMFF018G10+          ACCTCCGCGCGCATCCTGGCGATCAACTCGTGTGATAAATCCGACATCTATCTATCAATC
JMFN034H12-           ACCTCCGCGCGCATCCTGGCGATCAACTCGTGTGATAAATCCGACATCTATCTATCAATC
rJMFF044J13+          ACCTCCGCGCGCATCCTGGCGATCAACTCGTGTGATAAATCCGACATCTATCTATCAATC
JMFN046N19+           ACCTCCGCGCGCATCCTGGCGATCAACTCGTGTGATAAATCCGACATCTATCTATCAATC
                      ____________________________________________________________
consensus             ACCTCCGCGCGCATCCTGGCGATCAACTCGTGTGATAAATCCGACATCTATCTATCAATC
 
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JMFF044J13-           CTCAAATCTTCCGAGATCTCCCTGGAATACTATGTATGTTTGGTATGAAGTAC       
rJMFF018G10+          CTCAAATCTTCCGAGATCTCCCTGGAATACTATGTATGTTTGGTATGAAGTACTNTATGT
JMFN034H12-           CTCAAATCTTCCGAAATCTCCCTGGAATACTATGTATGTTTGGTATGAAGTACTTTATGT
rJMFF044J13+          CTCAAATCTTCCGAGATCTCCCTGGAATACTATGTATGTTTGGTATGAAGTACTTTATGT
JMFN046N19+           CTCAAATCTTCCGAAATCTCCCTGGAATACTATGTATGTTTGGTATGAAGTACTTTATGT
                      ____________________________________________________________
consensus             CTCAAATCTTCCGAGATCTCCCTGGAATACTATGTATGTTTGGTATGAAGTACTTTATGT
 
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rJMFF018G10+          ACGGATTANGTATGTTGTCAGTATGTGATTGTGCTTTTAAAAAAACA             
JMFN034H12-           ACGGATTATGTATGTTGTCAGTATGTGATTGTGCTTTTAAAAAAACACTAATTTTGATGT
rJMFF044J13+          ACGGATTATGTATGTTGTCAGTATGTGATTGTGCTTTTAAAAAAACACTAATTTTGATGT
JMFN046N19+           ACGGATTATGTATGTTGTCAGTATGTGATTGTGCTTTTAAAAAAACACTAATTTTGATGT
                      ____________________________________________________________
consensus             ACGGATTATGTATGTTGTCAGTATGTGATTGTGCTTTTAAAAAAACACTAATTTTGATGT
 
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JMFN034H12-           TTGTACG                                                     
rJMFF044J13+          TTGTACGGTATGGTATTGGTATGAACTGAATGTCTGAATGTATTGTCAGTATGTGATTGT
JMFN046N19+           TTGTACGGTATGGTATTGGTATGAACTGAATGTCTGAATGTATTGTCAGTATGTGATTGT
                      ____________________________________________________________
consensus             TTGTACGGTATGGTATTGGTATGAACTGAATGTCTGAATGTATTGTCAGTATGTGATTGT
 
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rJMFF044J13+          GCTTTTAAAAAAACACTAATTTTGATGTTTGTACGG                        
JMFN046N19+           GCTTTTAAAAAAACACTAATTTTGATGTTTGTACGGTATGGTATTGGTATGAACTGAATG
                      ____________________________________________________________
consensus             GCTTTTAAAAAAACACTAATTTTGATGTTTGTACGGTATGGTATTGGTATGAACTGAATG
 
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JMFN046N19+           TCTAATGTATATTTGTTTGTGGAGTTACXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTC
                      ____________________________________________________________
consensus             TCTAATGTATATTTGTTTGTGGAGTTACNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTC