Contig 011729:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN035F05Sequence599011729 (3)ref|XP_009415402.1|2e-20PREDICTED: GPI-anchored protein LORELEI-like [Musa acuminata subsp. malaccensis
JMFN042K01Sequence612011729 (3)ref|XP_009415402.1|2e-20PREDICTED: GPI-anchored protein LORELEI-like [Musa acuminata subsp. malaccensis
JMFN044A15Sequence479011729 (3)ref|XP_009415402.1|1e-19PREDICTED: GPI-anchored protein LORELEI-like [Musa acuminata subsp. malaccensis

Alignment

This contig is upended


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JMFN042K01+                                                          AGGTTAAGTTATA
                      ____________________________________________________________
consensus                                                            AGGTTAAGTTATA
 
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JMFN035F05+                                  ACAATNTTATATAGTACAAGTTTTGTACGTAATCCAA
JMFN044A15-                                  ACAATTTTATATAGTACAACTTTTGTATATAATCCAA
JMFN042K01+           ATTAAGCCAGTGGAAACACTTGTACAATTTTATATAGTACAACTTTTGTATATAATCCAA
                      ____________________________________________________________
consensus             ATTAAGCCAGTGGAAACACTTGTACAATTTTATATAGTACAACTTTTGTATATAATCCAA
 
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JMFN035F05+           ATCTTGGANCAGGAATTTATATATTCCAAACCTATTTTGGCTGCATTTTCTTCTTTCATA
JMFN044A15-           ATCTTGGA-CAAGAATTTATATATTCCAAACCCATTTTGGCTGCATTTTCTTCTTTCATA
JMFN042K01+           ATCTTGGA-CAAGAATTTATATATTCCAAACCCATTTTGGCTGCATTTTCTTCTTTTATA
                      ____________________________________________________________
consensus             ATCTTGGA-CAAGAATTTATATATTCCAAACCCATTTTGGCTGCATTTTCTTCTTTCATA
 
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JMFN035F05+           TATATTAATATCCAGCACAGTCGAGGTCCTTCTTGCCTTCAAATTCTTCACAGACGCGCC
JMFN044A15-           TATATTAATATCCAGCACAGTCGAGGTCCTTCTTGCCTTCAAATTCTTCACACACGCGCC
JMFN042K01+           TATATTAATATCCAGCACAGTCGAGGTCCTTCTTGCCTTCAAATTTTTCACACACGCGCC
                      ____________________________________________________________
consensus             TATATTAATATCCAGCACAGTCGAGGTCCTTCTTGCCTTCAAATTCTTCACACACGCGCC
 
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JMFN035F05+           GGAAAGTCCCCGGAGGATACTTGCCGTAGTTACGGAGATATTCGATCATTTCCTCGGCGC
JMFN044A15-           GGAAAGTCCCCGGAGGATACTTGCCGTAGTTACGGAGATATTCGATCATTTCCTCGGCGC
JMFN042K01+           GGAAAGTCCCCGGAGGATACTTGCCGTAGTTACGGAGATATTCGATCATTTCCTCGGCGC
                      ____________________________________________________________
consensus             GGAAAGTCCCCGGAGGATACTTGCCGTAGTTACGGAGATATTCGATCATTTCCTCGGCGC
 
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JMFN035F05+           AAGTGTTATCCTCGTTAAGGTAATCCCTATATTTGCAGGTTAATTGCTTAAATGATTTGC
JMFN044A15-           AAGTGTTATCCTCGTTAAGGTAATCCCTATATTTGCAAGTTAATTGTTTAAATGATTTGC
JMFN042K01+           AAGTGTTATCCTCGTTAAGGTAATCCCTATATTTGCAAGTTAATTGTTTAAATGATTTGC
                      ____________________________________________________________
consensus             AAGTGTTATCCTCGTTAAGGTAATCCCTATATTTGCAAGTTAATTGTTTAAATGATTTGC
 
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JMFN035F05+           AGCATGCCTTGGCGGGGTAAAGAAATGGTTGTTTTTGACACTGGCTCGTAACTATTTTGT
JMFN044A15-           AGCATGCCTTGGCGGGGTAAAGAAATGGTTGTTTTTGACACTGGCTCGTAACTATTTTGT
JMFN042K01+           AGCATGCCTTGGCGGGGTAAAGAAATGGTTGTTTTTGACACTGGCTCGTAACTATTTTGT
                      ____________________________________________________________
consensus             AGCATGCCTTGGCGGGGTAAAGAAATGGTTGTTTTTGACACTGGCTCGTAACTATTTTGT
 
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JMFN035F05+           AGTTCGCTTTTTTCACGTCGAATGGACAAGGTTCGGTCATCTTTGGTTCCTTTTTCTTTT
JMFN044A15-           AGTTCGCTTTCTTCACGTCGAATGGACAAGGTTCGGTCATCTTTGGTTCCTTTTTCTTTT
JMFN042K01+           AGTTCGCTTTCTTCACGTCGAATGGACAAGGTTCGGTCATCTTTGGTTCCTTTTTCTTTT
                      ____________________________________________________________
consensus             AGTTCGCTTTCTTCACGTCGAATGGACAAGGTTCGGTCATCTTTGGTTCCTTTTTCTTTT
 
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JMFN035F05+           CAAGAAGGGAACGCCCTTTTTCTCCTGGAGTCTCCACCGTATCATAATCAAGGAGTGAGG
JMFN044A15-           CAAGAAGGGAACGCCCTTTTTCTCCTGGAGTCTCCACCGTATCATAATCA          
JMFN042K01+           CAAGAAGGGAACGCCCTTTTTCTCCTGGAGTCTCCACCGTATCATAATCAAGGAGTGAGG
                      ____________________________________________________________
consensus             CAAGAAGGGAACGCCCTTTTTCTCCTGGAGTCTCCACCGTATCATAATCAAGGAGTGAGG
 
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JMFN035F05+           ATGTGGCAATGCCAAGAACAAGGAAGAAGAGAAGCAAAACGAAGCATATTCTCGACCCCA
JMFN042K01+           AGGTGGCAATGCCAAGAACAAAGAAGAAGAGAAGCAAAACGAAGCATATTCTTGACCCCA
                      ____________________________________________________________
consensus             ATGTGGCAATGCCAAGAACAAGGAAGAAGAGAAGCAAAACGAAGCATATTCTTGACCCCA
 
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JMFN035F05+           TTTTCTCCTCTTCTTTATTACTATTTTCTTTCTTTTATTCTGGAAAAGT           
JMFN042K01+           TTTTCTCCTCTTCTTTATTACTATTCTCTTTCTTTTATTCTGGAAAAGTTAAATGCTTTC
                      ____________________________________________________________
consensus             TTTTCTCCTCTTCTTTATTACTATTTTCTTTCTTTTATTCTGGAAAAGTTAAATGCTTTC