Contig 011724:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFS146D09-                                                         CTGAAGTTTTAGCA
                      ____________________________________________________________
consensus                                                           CTGAAGTTTTAGCA
 
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JMFS146D09-           GCTACTTTTATTCTTCGTCTTCGCCGCCGTCCGCGTATTCCCACATGGCTTCTTCCTCCG
                      ____________________________________________________________
consensus             GCTACTTTTATTCTTCGTCTTCGCCGCCGTCCGCGTATTCCCACATGGCTTCTTCCTCCG
 
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JMFS146D09-           TCAACCGATGGATCAGGCCCGAGGTTTTTCCTCTGTTCGCCTCCGTAGGCGTTGCCGTCG
JMFN039D14+                            CCCGAGGTTTTTCCTCTGTTCGCCTCCGTAGGCGTTGCCGTCG
                      ____________________________________________________________
consensus             TCAACCGATGGATCAGGCCCGAGGTTTTTCCTCTGTTCGCCTCCGTAGGCGTTGCCGTCG
 
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JMFS146D09-           GGATCTGCGGAATGCAGTTGATCCGCAACATCACCACCAATCCTGACGTCAGGGTGACCA
JMFN039D14+           GGATCTGCGGAATGCAGTTGATCCGCAACATCACCACCAATCCTGACGTCAGGGTGACCA
                      ____________________________________________________________
consensus             GGATCTGCGGAATGCAGTTGATCCGCAACATCACCACCAATCCTGACGTCAGGGTGACCA
 
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JMFS146D09-           AGGAAAACAGAGCTGCAGGGGTGCTGGACAATTTTGCTGAAGGAGAGAAATATGCCGAGC
JMFN039D14+           AGGAAAACAGAGCTGCAGGGGTGCTGGACAATTTTGCTGAAGGAGAGAAATATGCCGAGC
                      ____________________________________________________________
consensus             AGGAAAACAGAGCTGCAGGGGTGCTGGACAATTTTGCTGAAGGAGAGAAATATGCCGAGC
 
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JMFS146D09-           ATGGTCTAAGAAAGTATGTGCGTAACAGGTCACCAGAGATCATGCCATCCATCAATGGAT
JMFN039D14+           ATGGTCTAAGAAAGTATGTGCGTAACAGGTCACCAGAGATCATGCCATCCATCAATGGAT
                      ____________________________________________________________
consensus             ATGGTCTAAGAAAGTATGTGCGTAACAGGTCACCAGAGATCATGCCATCCATCAATGGAT
 
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JMFS146D09-           TCTTCACTGACCCAAAATGAAGTTTCTGCTCTGTAGTGCTCAAGATGTCCCAATTGCTTA
JMFN039D14+           TCTTCACTGACCCAAAATGAAGTTTCTGCTCTGTAGTGCTCAAGATGTCCCAATTGCTTA
                      ____________________________________________________________
consensus             TCTTCACTGACCCAAAATGAAGTTTCTGCTCTGTAGTGCTCAAGATGTCCCAATTGCTTA
 
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JMFS146D09-           AACACCATTTTTTACTTTCCATTAGTACTGATTCATATACTTTATAGTGATTGCAAATGC
JMFN039D14+           AACACCATTTTTTACTTTCCATTAGTACTGATTCATATACTTTATAGTGATTGCAAATGC
                      ____________________________________________________________
consensus             AACACCATTTTTTACTTTCCATTAGTACTGATTCATATACTTTATAGTGATTGCAAATGC
 
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JMFS146D09-           TGAACTTTGGAAAAGTTCACTTTAATTCTTCAAGCAATTGTTTTGAAACTCACAGTTGAA
JMFN039D14+           TGAACTTTGGAAAAGTTCACTTTAATTCTTCAAGCAATTGTTTTGAAACTCACAGTTGAA
                      ____________________________________________________________
consensus             TGAACTTTGGAAAAGTTCACTTTAATTCTTCAAGCAATTGTTTTGAAACTCACAGTTGAA
 
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JMFS146D09-           TAAGTGCAGAATTATTGAG                                         
JMFN039D14+           TAAGTGCAGAATTATTGAGXXXXXXXXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
                      ____________________________________________________________
consensus             TAAGTGCAGAATTATTGAGNNNNNNNNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC