Contig 011722:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF038P12Sequence373011722 (3)ref|XP_010937298.1|3e-17PREDICTED: 3-ketoacyl-CoA synthase 10-like [Elaeis guineensis]
JMFN038B04Sequence597011722 (3)gb|ABG35745.1|9e-39putative FIDDLEHEAD very long chain fatty acid condensing enzyme FDH;1 [Hordeum
JMSF051M20Sequence631022271gb|EYU21968.1|1e-83hypothetical protein MIMGU_mgv1a004214mg [Erythranthe guttata]742011722 (3)gb|KHN37223.1|8e-1183-ketoacyl-CoA synthase 10 [Glycine soja]

Alignment

This contig is upended


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rJMSF051M20+                                                   GGTGAGCTTAATTGGTACT
                      ____________________________________________________________
consensus                                                      GGTGAGCTTAATTGGTACT
 
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rJMSF051M20+          CCGGCAAGGACCGCTCCATGNTCATCCCCAACTGNTTTTCCGCATGGGCTGCTCCGCCCT
                      ____________________________________________________________
consensus             CCGGCAAGGACCGCTCCATGNTCATCCCCAACTGNTTTTCCGCATGGGCTGCTCCGCCCT
 
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rJMSF051M20+          GCTTCTCTCCAACCGCCGCCGCGACTACGGCCGCGCCAAGTACCGCCTCGAGCACATTGT
                      ____________________________________________________________
consensus             GCTTCTCTCCAACCGCCGCCGCGACTACGGCCGCGCCAAGTACCGCCTCGAGCACATTGT
 
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rJMSF051M20+          TCGGACTCACAAAGCCGCCGACGACCGCTCCTTCAGGGCTATTTATCAAAAAGAGGATGA
                      ____________________________________________________________
consensus             TCGGACTCACAAAGCCGCCGACGACCGCTCCTTCAGGGCTATTTATCAAAAAGAGGATGA
 
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rJMSF051M20+          TGAAGGCAAGAAGGGGTTGAAGATTAGCAAAGAATTAGTCCGAATAGGGGGAGAGGCACT
                      ____________________________________________________________
consensus             TGAAGGCAAGAAGGGGTTGAAGATTAGCAAAGAATTAGTCCGAATAGGGGGAGAGGCACT
 
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rJMSF051M20+          GAAGACCAACATAACCACACTGGGCCCACTAGTTCTGCCGGTGTCGGAGCAGCTCATCTT
                      ____________________________________________________________
consensus             GAAGACCAACATAACCACACTGGGCCCACTAGTTCTGCCGGTGTCGGAGCAGCTCATCTT
 
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rJMSF051M20+          CTTCGCAACGCTGGTATGGGGCCACCTGTTTGGCTCCTCCTCGCAGCGGCCGTACATACC
                      ____________________________________________________________
consensus             CTTCGCAACGCTGGTATGGGGCCACCTGTTTGGCTCCTCCTCGCAGCGGCCGTACATACC
 
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rJMSF051M20+          GGACTACAAGCTGGCCTTCGACCACTTTTGCATCTACGCGCCCAGCAAGGTGGTTTTGGA
                      ____________________________________________________________
consensus             GGACTACAAGCTGGCCTTCGACCACTTTTGCATCTACGCGCCCAGCAAGGTGGTTTTGGA
 
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rJMSF051M20+          CGAGTTGCAGGCCAACATGGGCCTGAGGGACGGCGACATGGAGCCCAGCCGCGCCACGCT
                      ____________________________________________________________
consensus             CGAGTTGCAGGCCAACATGGGCCTGAGGGACGGCGACATGGAGCCCAGCCGCGCCACGCT
 
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rJMSF051M20+          ACACCGCTTCGGCAACACTTCCAGCAGCAGCATATGGTACGAGCTGGCGTACTTGGAGGC
JMFN038B04-            CACCGCTTCGGCAACACTTCCAGCAGCAGCATATGGTACGAGCTGGCGTACTTGGAGGC
                      ____________________________________________________________
consensus             ACACCGCTTCGGCAACACTTCCAGCAGCAGCATATGGTACGAGCTGGCGTACTTGGAGGC
 
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rJMSF051M20+          CAAGGGGAAGGTGGCCGGCGGCGACCGCCTCTGGCAGATCGTGTTCGGGTCCGGTTTCAA
rJMFF038P12+             GGGGAAGGTGGCCGGCGGCGACCGCCTCTGGCAGATCGTGTTCGGGTCCGGTTTCAA
JMFN038B04-           CAAGGGGAAGGTGGCCGGCGGCGACCGCCTCTGGCAGATCGTGTTCGGGTCCGGTTTCAA
                      ____________________________________________________________
consensus             CAAGGGGAAGGTGGCCGGCGGCGACCGCCTCTGGCAGATCGTGTTCGGGTCCGGTTTCAA
 
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rJMSF051M20+          ATGCAACAGCGCCGTGTGGCGGGCCGTACGCCGCATCAGGATGCCCACCGCCAACCCCTG
rJMFF038P12+          ATGCAACAGCGCCGTGTGGCGGGCCGTACGCCGCATCAGGATGCCCNCCGCCAACCCCTG
JMFN038B04-           ATGCAACAGCGCCGTGTGGCGGGCCGTACGCCGCATCAGGATGCCCACCGCCAACCCCTG
                      ____________________________________________________________
consensus             ATGCAACAGCGCCGTGTGGCGGGCCGTACGCCGCATCAGGATGCCCACCGCCAACCCCTG
 
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rJMSF051M20+          GCTCGACTGCATCCACACCTATCCTCGGGCCATCTAGCTAGGGTACGGTGCAACGTAACA
rJMFF038P12+          GCTCGANTGCATCCACACCTATCCTCGGGCCATCTAGCTAGGGTACGGTGCAACGTAACA
JMFN038B04-           GCTCGACTGCATCCACACCTATCCTCGGGCCATCTAGCTAGGGTACGGTGCAACGTAACA
                      ____________________________________________________________
consensus             GCTCGACTGCATCCACACCTATCCTCGGGCCATCTAGCTAGGGTACGGTGCAACGTAACA
 
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rJMSF051M20+          TAA                                                         
rJMFF038P12+          TAACATATATGCAATGCATGATTTATTATTATTATTGAGTTAATATGTGGTCCTCTTAAT
JMFN038B04-           TAACATATATGCAATGCATGATTTATTATTATTATTGAGTTAATATGTGGTCCTCTTAAT
                      ____________________________________________________________
consensus             TAACATATATGCAATGCATGATTTATTATTATTATTGAGTTAATATGTGGTCCTCTTAAT
 
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rJMFF038P12+          ATAGTGGTTTTGCCATTTCTAATCCTAAACTTTTAAATTGATCACCCCCGTCTTTTGATT
JMFN038B04-           ATAGTGGTTTTGCCATTTCTAATCCTAAACTTTTAAATTGATCACCCCCGTCTTTTGATT
                      ____________________________________________________________
consensus             ATAGTGGTTTTGCCATTTCTAATCCTAAACTTTTAAATTGATCACCCCCGTCTTTTGATT
 
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rJMFF038P12+          TTCAAATTATTATTGGTCNTACAAGACAGGCAGGGGTTCGACTAACTTCGAAGGCCACCA
JMFN038B04-           TTCAAATTATTATTGGTCCTACAAGACAGGCAGGGGTTCGACTAACTTCGAAGGCCACCA
                      ____________________________________________________________
consensus             TTCAAATTATTATTGGTCCTACAAGACAGGCAGGGGTTCGACTAACTTCGAAGGCCACCA
 
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rJMFF038P12+          AAAACAATTCTAAGAA                                            
JMFN038B04-           AAAACAATTTTAAGAATGTTTTTATTTGTCATTATATTATATTGATTGCATTCGATCGGC
                      ____________________________________________________________
consensus             AAAACAATTTTAAGAATGTTTTTATTTGTCATTATATTATATTGATTGCATTCGATCGGC
 
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JMFN038B04-           ATAAAATTTGTATGTCATTGTAATATTATAATAATCGTATCAATTTTTTTTAAAAAAAAA
                      ____________________________________________________________
consensus             ATAAAATTTGTATGTCATTGTAATATTATAATAATCGTATCAATTTTTTTTAAAAAAAAA