Contig 011720:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036I14Sequence597011720 (3)gb|EYU31047.1|5e-66hypothetical protein MIMGU_mgv1a016672mg [Erythranthe guttata]
JMSF029E22Sequence538011720 (3)gb|EYU31047.1|2e-66hypothetical protein MIMGU_mgv1a016672mg [Erythranthe guttata]490011720 (3)gb|EYU31047.1|9e-67hypothetical protein MIMGU_mgv1a016672mg [Erythranthe guttata]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN036I14+ CGATATAGAGGGAAGAATGAAAAATATAATNCTGAATTCATCTATTATCCAGTCTCA
                      ____________________________________________________________
consensus CGATATAGAGGGAAGAATGAAAAATATAATNCTGAATTCATCTATTATCCAGTCTCA
 
. : . : . : . : . : . :
JMSF029E22+ TTGAAAAGAAAGAAACAAAATTCGTCGATAATTAGCATTCAAAAGATCTTC
JMFN036I14+ AACTCAAACTTGAAAAGAAAGAAACAAAATTCGTCGATAATTAGCATTCAAAAGATCTTC
                      ____________________________________________________________
consensus AACTCAAACTTGAAAAGAAAGAAACAAAATTCGTCGATAATTAGCATTCAAAAGATCTTC
 
. : . : . : . : . : . :
rJMSF029E22- GTTCTTGGCATTAAAGAACAACAGTTGGAATAACGTAATCCTGGAAAACATGGTTCTA
JMSF029E22+ CAGTTCTTGGCATTAAAGAACAACAGTTGGAATAACGTAATCCTGGAAAACATGGTTCTA
JMFN036I14+ CAGTTCTTGGCATTAAAGAACAACAGTTGGAATAACGTAATCCTGGAAAACATGGTTCTA
                      ____________________________________________________________
consensus CAGTTCTTGGCATTAAAGAACAACAGTTGGAATAACGTAATCCTGGAAAACATGGTTCTA
 
. : . : . : . : . : . :
rJMSF029E22- CTTTGCTGGATGGTATTGATCTATTACTGCTCTGAGGGCAGAGACTTGATGATGTCCGAA
JMSF029E22+ CTTTGCTGGATGGTATTGATCTATTACTGCTCTGAGGGCAGAGACTTGATGATGTCCGAA
JMFN036I14+ CTTTGCTGGATGGTATTGATCTATTACTGCTCTGAGGGCAGAGACTTGATGATGTCCGAA
                      ____________________________________________________________
consensus CTTTGCTGGATGGTATTGATCTATTACTGCTCTGAGGGCAGAGACTTGATGATGTCCGAA
 
. : . : . : . : . : . :
rJMSF029E22- TCGCCTGGATCAACGATGCTAAGGCAAGACACACGGAAATACTTTCCGCAAGCAGTACCC
JMSF029E22+ TCGCCTGGATCAACGATGCTAAGGCAAGACACACGGAAATACTTTCCGCAAGCAGTACCC
JMFN036I14+ TCGCCTGGATCAACGATGCTAAGGCAAGACACACGGAAATACTTTCCGCAAGCAGTACCC
                      ____________________________________________________________
consensus TCGCCTGGATCAACGATGCTAAGGCAAGACACACGGAAATACTTTCCGCAAGCAGTACCC
 
. : . : . : . : . : . :
rJMSF029E22- AGATCAACATTGTTTCCATTGTAATGGTGAACCCCAACCTTAGCAAGCATAGCATAGTAC
JMSF029E22+ AGATCAACATTGTTTCCATTGTAATGGTGAACCCCAACCTTAGCAAGCATAGCATAGTAC
JMFN036I14+ AGATCAACATTGTTTCCATTGTAATGGTGAACCCCAACCTTAGCAAGCATAGCATAGTAC
                      ____________________________________________________________
consensus AGATCAACATTGTTTCCATTGTAATGGTGAACCCCAACCTTAGCAAGCATAGCATAGTAC
 
. : . : . : . : . : . :
rJMSF029E22- TCAATCTCAGACTTCCTCAGAGGTGGGCAATTGTTGGAAATCAATATGAGCTTTCCTTTG
JMSF029E22+ TCAATCTCAGACTTCCTCAGAGGTGGGCAATTGTTGGAAATCAATATGAGCTTTCCTTTG
JMFN036I14+ TCAATCTCAGACTTCCTCAGAGGTGGGCAATTGTTGGAAATCAATATGAGCTTTCCTTTG
                      ____________________________________________________________
consensus TCAATCTCAGACTTCCTCAGAGGTGGGCAATTGTTGGAAATCAATATGAGCTTTCCTTTG
 
. : . : . : . : . : . :
rJMSF029E22- GAGCTCCTGAGGGTCTTGAGAACAGTCTTGTACCCAAGTGTAAACTTGCCGCTCTTCATC
JMSF029E22+ GAGCTCCTGAGGGTCTTGAGAACAGTCTTGTACCCAAGTGTAAACTTGCCGCTCTTCATC
JMFN036I14+ GAGCTCCTGAGGGTCTTGAGAACAGTCTTGTACCCAAGTGTAAACTTGCCGCTCTTCATC
                      ____________________________________________________________
consensus GAGCTCCTGAGGGTCTTGAGAACAGTCTTGTACCCAAGTGTAAACTTGCCGCTCTTCATC
 
. : . : . : . : . : . :
rJMSF029E22- ACCAGAGCCAATCTGTTGTTAATGCTCTCATGGGTCTTCTTAGTCTTCTTTCCGGTGGTC
JMSF029E22+ ACCAGAGCCAATCTGTTGTTAATGCTCTCATGGGTCTTCTTAGTCTTCTTTCCGGTGGTC
JMFN036I14+ ACCAGAGCCAATCTGTTGTTAATGCTCTCATGGGTCTTCTTAGTCTTCTTTCCGGTGGTC
                      ____________________________________________________________
consensus ACCAGAGCCAATCTGTTGTTAATGCTCTCATGGGTCTTCTTAGTCTTCTTTCCGGTGGTC
 
. : . : . : . : . : . :
rJMSF029E22- ACCATTTTCAATGACTACAGACGCGAAGAGATCTGCCGCGACGAGGTTAGGGGAACTG
JMSF029E22+ ACCATTTTCAATGACTACAGACGCGAAGAGATCTGCCGCGACGAGGTTAGGGGAACTG
JMFN036I14+ ACCATTTTCAATGACTACAGACGCGAAGAGATCTGCCGCGACGAGGTTAGGGGAACTGGG
                      ____________________________________________________________
consensus ACCATTTTCAATGACTACAGACGCGAAGAGATCTGCCGCGACGAGGTTAGGGGAACTGGG