Contig 011720:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN036I14Sequence597011720 (3)gb|EYU31047.1|5e-66hypothetical protein MIMGU_mgv1a016672mg [Erythranthe guttata]
JMSF029E22Sequence538011720 (3)gb|EYU31047.1|2e-66hypothetical protein MIMGU_mgv1a016672mg [Erythranthe guttata]490011720 (3)gb|EYU31047.1|9e-67hypothetical protein MIMGU_mgv1a016672mg [Erythranthe guttata]

Alignment

This contig is upended


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JMFN036I14+              CGATATAGAGGGAAGAATGAAAAATATAATNCTGAATTCATCTATTATCCAGTCTCA
                      ____________________________________________________________
consensus                CGATATAGAGGGAAGAATGAAAAATATAATNCTGAATTCATCTATTATCCAGTCTCA
 
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JMSF029E22+                    TTGAAAAGAAAGAAACAAAATTCGTCGATAATTAGCATTCAAAAGATCTTC
JMFN036I14+           AACTCAAACTTGAAAAGAAAGAAACAAAATTCGTCGATAATTAGCATTCAAAAGATCTTC
                      ____________________________________________________________
consensus             AACTCAAACTTGAAAAGAAAGAAACAAAATTCGTCGATAATTAGCATTCAAAAGATCTTC
 
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rJMSF029E22-            GTTCTTGGCATTAAAGAACAACAGTTGGAATAACGTAATCCTGGAAAACATGGTTCTA
JMSF029E22+           CAGTTCTTGGCATTAAAGAACAACAGTTGGAATAACGTAATCCTGGAAAACATGGTTCTA
JMFN036I14+           CAGTTCTTGGCATTAAAGAACAACAGTTGGAATAACGTAATCCTGGAAAACATGGTTCTA
                      ____________________________________________________________
consensus             CAGTTCTTGGCATTAAAGAACAACAGTTGGAATAACGTAATCCTGGAAAACATGGTTCTA
 
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rJMSF029E22-          CTTTGCTGGATGGTATTGATCTATTACTGCTCTGAGGGCAGAGACTTGATGATGTCCGAA
JMSF029E22+           CTTTGCTGGATGGTATTGATCTATTACTGCTCTGAGGGCAGAGACTTGATGATGTCCGAA
JMFN036I14+           CTTTGCTGGATGGTATTGATCTATTACTGCTCTGAGGGCAGAGACTTGATGATGTCCGAA
                      ____________________________________________________________
consensus             CTTTGCTGGATGGTATTGATCTATTACTGCTCTGAGGGCAGAGACTTGATGATGTCCGAA
 
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rJMSF029E22-          TCGCCTGGATCAACGATGCTAAGGCAAGACACACGGAAATACTTTCCGCAAGCAGTACCC
JMSF029E22+           TCGCCTGGATCAACGATGCTAAGGCAAGACACACGGAAATACTTTCCGCAAGCAGTACCC
JMFN036I14+           TCGCCTGGATCAACGATGCTAAGGCAAGACACACGGAAATACTTTCCGCAAGCAGTACCC
                      ____________________________________________________________
consensus             TCGCCTGGATCAACGATGCTAAGGCAAGACACACGGAAATACTTTCCGCAAGCAGTACCC
 
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rJMSF029E22-          AGATCAACATTGTTTCCATTGTAATGGTGAACCCCAACCTTAGCAAGCATAGCATAGTAC
JMSF029E22+           AGATCAACATTGTTTCCATTGTAATGGTGAACCCCAACCTTAGCAAGCATAGCATAGTAC
JMFN036I14+           AGATCAACATTGTTTCCATTGTAATGGTGAACCCCAACCTTAGCAAGCATAGCATAGTAC
                      ____________________________________________________________
consensus             AGATCAACATTGTTTCCATTGTAATGGTGAACCCCAACCTTAGCAAGCATAGCATAGTAC
 
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rJMSF029E22-          TCAATCTCAGACTTCCTCAGAGGTGGGCAATTGTTGGAAATCAATATGAGCTTTCCTTTG
JMSF029E22+           TCAATCTCAGACTTCCTCAGAGGTGGGCAATTGTTGGAAATCAATATGAGCTTTCCTTTG
JMFN036I14+           TCAATCTCAGACTTCCTCAGAGGTGGGCAATTGTTGGAAATCAATATGAGCTTTCCTTTG
                      ____________________________________________________________
consensus             TCAATCTCAGACTTCCTCAGAGGTGGGCAATTGTTGGAAATCAATATGAGCTTTCCTTTG
 
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rJMSF029E22-          GAGCTCCTGAGGGTCTTGAGAACAGTCTTGTACCCAAGTGTAAACTTGCCGCTCTTCATC
JMSF029E22+           GAGCTCCTGAGGGTCTTGAGAACAGTCTTGTACCCAAGTGTAAACTTGCCGCTCTTCATC
JMFN036I14+           GAGCTCCTGAGGGTCTTGAGAACAGTCTTGTACCCAAGTGTAAACTTGCCGCTCTTCATC
                      ____________________________________________________________
consensus             GAGCTCCTGAGGGTCTTGAGAACAGTCTTGTACCCAAGTGTAAACTTGCCGCTCTTCATC
 
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rJMSF029E22-          ACCAGAGCCAATCTGTTGTTAATGCTCTCATGGGTCTTCTTAGTCTTCTTTCCGGTGGTC
JMSF029E22+           ACCAGAGCCAATCTGTTGTTAATGCTCTCATGGGTCTTCTTAGTCTTCTTTCCGGTGGTC
JMFN036I14+           ACCAGAGCCAATCTGTTGTTAATGCTCTCATGGGTCTTCTTAGTCTTCTTTCCGGTGGTC
                      ____________________________________________________________
consensus             ACCAGAGCCAATCTGTTGTTAATGCTCTCATGGGTCTTCTTAGTCTTCTTTCCGGTGGTC
 
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rJMSF029E22-          ACCATTTTCAATGACTACAGACGCGAAGAGATCTGCCGCGACGAGGTTAGGGGAACTG  
JMSF029E22+           ACCATTTTCAATGACTACAGACGCGAAGAGATCTGCCGCGACGAGGTTAGGGGAACTG  
JMFN036I14+           ACCATTTTCAATGACTACAGACGCGAAGAGATCTGCCGCGACGAGGTTAGGGGAACTGGG
                      ____________________________________________________________
consensus             ACCATTTTCAATGACTACAGACGCGAAGAGATCTGCCGCGACGAGGTTAGGGGAACTGGG