Contig 011719:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN025M17Sequence461011719 (2)ref|XP_004298854.1|2e-44PREDICTED: disease resistance response protein 206-like [Fragaria vesca subsp.
JMFN035M06Sequence594011719 (2)ref|XP_004298854.1|2e-93PREDICTED: disease resistance response protein 206-like [Fragaria vesca subsp.

Alignment

This contig is upended


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JMFN025M17+                                                                 AAAAGT
                      ____________________________________________________________
consensus                                                                   AAAAGT
 
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JMFN025M17+           AACTCTTCAATTTTATTCCAAATTTTGTTACCTTGGAAAACACAGAGAAATAGGCACAGA
                      ____________________________________________________________
consensus             AACTCTTCAATTTTATTCCAAATTTTGTTACCTTGGAAAACACAGAGAAATAGGCACAGA
 
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JMFN025M17+           CATACAAAGGTAGTCATCGGACGAGGCTAACATTGTACCACATAAGTTGTGCCGTACGTA
                      ____________________________________________________________
consensus             CATACAAAGGTAGTCATCGGACGAGGCTAACATTGTACCACATAAGTTGTGCCGTACGTA
 
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JMFN025M17+           CGCATACATATAACTTGTTTTCATAAATATGAAAAAGGCAATTATATTGAAACCCTATTT
                      ____________________________________________________________
consensus             CGCATACATATAACTTGTTTTCATAAATATGAAAAAGGCAATTATATTGAAACCCTATTT
 
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JMFN025M17+           TACAATTATAGGGTGTGGACTATGAAATTATATTTCACTACCAGCACTCGTAGAATTTGA
                      ____________________________________________________________
consensus             TACAATTATAGGGTGTGGACTATGAAATTATATTTCACTACCAGCACTCGTAGAATTTGA
 
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JMFN025M17+           TATCCACGCGAAGTCTGAAATAAACCTCGCCTTCAAAGGCGTCGGTCATGACGGTGGCGA
JMFN035M06+                 CGCGAAGTCTGAAATAAACCTCGCCTTCAAGAGCGTCGGTCATGACGGTGGCGA
                      ____________________________________________________________
consensus             TATCCACGCGAAGTCTGAAATAAACCTCGCCTTCAAGGGCGTCGGTCATGACGGTGGCGA
 
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JMFN025M17+           CGCCGCGGTGCATGAAGAAGTCGCCGGTGCCACCCACCACCGATATATCCCTAGTCTTAT
JMFN035M06+           CGCCGCGGTGCATGAAGAAGTCGCCGGTGCCACCCACCACCGATATATCCCTAGTCTTAT
                      ____________________________________________________________
consensus             CGCCGCGGTGCATGAAGAAGTCGCCGGTGCCACCCACCACCGATATATCCCTAGTCTTAT
 
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JMFN025M17+           TCATCAATGGGTCTGCGCCAATGAAATTTATGCTCCCTTGAGAATCCGTAGTGTTAAGCA
JMFN035M06+           TCATCAATGGGTCTGCGCCAATGAAATTTATGCTCCCTTGAGAATCCGTAGTGTTAAGCA
                      ____________________________________________________________
consensus             TCATCAATGGGTCTGCGCCAATGAAATTTATGCTCCCTTGAGAATCCGTAGTGTTAAGCA
 
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JMFN025M17+           CAAAAGAGAACCCAAGCCAAGCCGTGTAAGTATTC                         
JMFN035M06+           CAAAAGAGAACCCAAGCCAAGCCGTGTAAGTATTCTTGGTGTCGTACATGTACATCCCTT
                      ____________________________________________________________
consensus             CAAAAGAGAACCCAAGCCAAGCCGTGTAAGTATTCTTGGTGTCGTACATGTACATCCCTT
 
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JMFN035M06+           GGGCCCTCCCCACCGGCGTGGAGTGGAAGTTGTTGTCTAAAGTGATGGGGTCGTCGAAAA
                      ____________________________________________________________
consensus             GGGCCCTCCCCACCGGCGTGGAGTGGAAGTTGTTGTCTAAAGTGATGGGGTCGTCGAAAA
 
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JMFN035M06+           CGACGACGTTGCCGAAGTGGAACTGGGTGGCGAGGATGGTGTAGTTGCCCCACTGCGGGG
                      ____________________________________________________________
consensus             CGACGACGTTGCCGAAGTGGAACTGGGTGGCGAGGATGGTGTAGTTGCCCCACTGCGGGG
 
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JMFN035M06+           CTCCGACAATGGTGGAGGTGGCGTTAGCGGCGTTTTGGCCGTTGTAGATGACGTCGTGGA
                      ____________________________________________________________
consensus             CTCCGACAATGGTGGAGGTGGCGTTAGCGGCGTTTTGGCCGTTGTAGATGACGTCGTGGA
 
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JMFN035M06+           AGTACAAGACTAGGTTCTTGCATGGCTTGTATGGCTTCTTCCTGCCCATTGGGTGTGTAG
                      ____________________________________________________________
consensus             AGTACAAGACTAGGTTCTTGCATGGCTTGTATGGCTTCTTCCTGCCCATTGGGTGTGTAG
 
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JMFN035M06+           AGGAGACTGAAATTAGGAAGAAAAAGAGGCAAAAAAGAGTGAAAATATTGGGATTTCTTG
                      ____________________________________________________________
consensus             AGGAGACTGAAATTAGGAAGAAAAAGAGGCAAAAAAGAGTGAAAATATTGGGATTTCTTG
 
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JMFN035M06+           ATGTTGTCATTTTCTTAGCACTAAAAAGAAAGGGTATAAAGTTTGTAGTAGTAAGCCTCG
                      ____________________________________________________________
consensus             ATGTTGTCATTTTCTTAGCACTAAAAAGAAAGGGTATAAAGTTTGTAGTAGTAAGCCTCG