Contig 011715:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF003J15Sequence601001727 (10)ref|XP_006361420.1|4e-94PREDICTED: uncharacterized protein R102.4 isoform X1 [Solanum tuberosum] ref|XP410011715 (12)ref|XP_009798339.1|1e-19PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF006A17Sequence510001727 (10)ref|XP_009631531.1|5e-56PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi836011715 (12)ref|XP_004236787.1|3e-81PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X2 [Solanum
JMFF009H15Sequence436001727 (10)ref|XP_009631531.1|4e-37PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi797011715 (12)ref|XP_009798339.1|5e-98PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF020D04Sequence435001727 (10)ref|XP_009631531.1|1e-36PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi762011715 (12)ref|XP_009798339.1|1e-96PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF023B04Sequence496001727 (10)ref|XP_009631531.1|1e-52PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi736011715 (12)ref|XP_009798339.1|3e-92PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF023G24Sequence685011715 (12)ref|XP_009798339.1|9e-81PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF023J06Sequence463001727 (10)ref|XP_009631531.1|1e-42PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi788011715 (12)ref|XP_009798339.1|1e-106PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF027L13Sequence615001727 (10)ref|XP_009631531.1|3e-98PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi464011715 (12)ref|XP_009798339.1|2e-30PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF034N12Sequence513001727 (10)ref|XP_009631531.1|5e-56PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi796011715 (12)ref|XP_009798339.1|2e-107PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF042J15Sequence640001727 (10)ref|XP_006361420.1|5e-88PREDICTED: uncharacterized protein R102.4 isoform X1 [Solanum tuberosum] ref|XP644011715 (12)ref|XP_009798339.1|3e-62PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFF050M22Sequence586001727 (10)ref|XP_009631531.1|3e-72PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosi603011715 (12)ref|XP_009798339.1|3e-59PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri
JMFN034K11Sequence610011715 (12)ref|XP_009798339.1|3e-49PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana sylvestri

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023J06+                                           CAGCAGAGTATACAGACAAAGTTGGAG
rJMFF034N12+                                           CAGCAGAGTATACAGACAAAGTNGGAG
rJMFF006A17+                             TGGTAGATGCNTCTCAGCAGAGTATACAGACAAAGTTGGAG
                      ____________________________________________________________
consensus                                TGGTAGATGCNTCTCAGCAGAGTATACAGACAAAGTTGGAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+                                 AAACTTCATATNGATGGAGCTCGCATATTCAATGCAT
rJMFF023J06+          AGCTCGCAAAGAAGTACGGGCTGAAACTTCATATTGATGGAGCTCGCATATTCAATGCAT
rJMFF034N12+          AGCTCGCAAAGAAGTACGGGCTGAAACTTCATATTGATGGAGCTCGCATATTCAATGCAT
rJMFF020D04+              CGCAAAGAAGTACGGGCTGAAACTTCATATTGATGGAGCTCGCATATTCAATGCAT
rJMFF006A17+          AGCTCGCAAAGAAGTACGGGCTGAAACTTCATATTGATGGAGCTCGCATATTCAATGCAT
rJMFF009H15+          AGCTCGCAAAGAAGTACGGGCTGAAACTTCATATTGATGGAGCTCGCATATTCAATGCAT
                      ____________________________________________________________
consensus             AGCTCGCAAAGAAGTACGGGCTGAAACTTCATATTGATGGAGCTCGCATATTCAATGCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          CTGCTGCCCTTGGCGTTCCTGCTAGTAGGCTTGTACAGNCTGCCGATTCTGTTTCTGTTT
rJMFF023J06+          CTGCTGCCCTTGGCGTTCCTGCTAGTAGGCTTGTACAGGCTGCCGATTCTGTTTCTGTTT
rJMFF034N12+          CTGCTGCCCTTGGCGTTCCTGCTAGTAGGCTTGTACAGGCTGCCGATTCTGTTTCTGTTT
rJMFF020D04+          CTGCTGCCCTNGGCGTTCNTGCTAGTAGGCTTGTACAGGCTGCCGATTCTGTTTCTGTTT
rJMFF023G24+                               CTAGTAGGCTTGTACAGGCTGCCGATTCTGTTTCTGTTT
rJMFF006A17+          CTGCTGCCCTTGGCGTTCCTGCTAGTAGGCTTGTACAGGCTGCCGATTCTGTTTCTGTTT
rJMFF009H15+          CTGCTGCCCTTGGCGTTCCTGCTAGTAGGCTTGTACAGGCTGCCGATTCTGTTTCTGTTN
                      ____________________________________________________________
consensus             CTGCTGCCCTTGGCGTTCCTGCTAGTAGGCTTGTACAGGCTGCCGATTCTGTTTCTGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          GTCTGTCAAAAGGTCTGGGCGCTCCAGTAGGAAGTGTAATTGTTGGTCCGAAAAGCTTCA
rJMFF023J06+          GTCTGTCAAAAGGTCTGGGCGCTCCAGTAGGAAGTGTAATTGTTGGTCCGAAAAGCTTCA
rJMFF034N12+          GTCTGTCAAAAGGTCTGGGCGCTCCAGTAGGAAGTGTAATTGTTGGTCCGAAAAGCTTCA
rJMFF020D04+          GTCTGTCAAAAGGTCTGGGCGCTCCAGTAGGAAGTGTAATTGTTGGTCCGAAAAGCTTCA
rJMFF023G24+          GTCTGTCAAAAGGTCTGGGCGCTCCAGTAGGAAGTGTAATTGTTGGTCCGAAAAGCTTCA
rJMFF006A17+          GTCTGTCAAAAGGTCTGGGCGCTCCAGTAGGAAGTGTAATTGTTGGTCCGAAAAGCTTCA
rJMFF009H15+          GTCTGTCAAAAGGTCTGGGCGCTCCAGTAGGAAGTGTAATTGTTGGTCCGAAAAGCTTCA
rJMFF042J15+                                                           GAAAAGCTTCA
                      ____________________________________________________________
consensus             GTCTGTCAAAAGGTCTGGGCGCTCCAGTAGGAAGTGTAATTGTTGGTCCGAAAAGCTTCA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          TTGACAGGGCAAGGATTATGAGAAAGACCTTAGGCGGTGGAATGAGACAGATAGGCGTGT
rJMFF023J06+          TTGACAGGGCAAGGATTATGAGAAAGACCTTAGGCGGTGGAATGAGACAGATAGGCGTGT
rJMFF034N12+          TTGACAGGGCAAGGATTATGAGAAAGACCTTAGGCGGTGGAATGAGACAGATAGGCGTGT
rJMFF020D04+          TTGACAGGGCAAGGATTATGAGAAAGACCTTAGGCGGTGGAATGAGACAGATAGGCGTGT
rJMFF027L13+                   CAAGGATTATGAGAAAGACNTNAGGCGGTGGAATGAGACAGATAGGCGTGT
rJMFF023G24+          TTGACAGGGCAAGGATTATGAGAAAGACCTTAGGCGGTGGAATGAGACAGATAGGCGTGT
rJMFF006A17+          TTGACAGGGCAAGGATTATGAGAAAGACCTTAGGCGGTGGAATGAGACAGATAGGCGTGT
rJMFF009H15+          TTGACAGGGCAAGGATTATGAGAAAGACCTTAGGCGGTGGAATGAGACAGATAGGCGTGT
rJMFF050M22+                GGGCAAGGATTATGAGAAAGACCTTAGGCGGTGGAATGAGACAGATAGGCGTGT
rJMFF042J15+          TTGACAGGGCAAGGATTATGAGAAAGACCTTAGGCGGTGGAATGAGACAGATAGGCGTGT
JMFN034K11+                                                             ATAGGCGTGT
                      ____________________________________________________________
consensus             TTGACAGGGCAAGGATTATGAGAAAGACCTTAGGCGGTGGAATGAGACAGATAGGCGTGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          TGTGTGCTGCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTCGAAGGGGATCACA
rJMFF023J06+          TGTGTGCTGCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTCGAAGGGGATCACA
rJMFF034N12+          TGTGTGCTGCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTCGAAGGGGATCACA
rJMFF020D04+          TGTGTGCTGCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTCGAAGGGGATCACA
rJMFF027L13+          --TGTTNTNCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTNGAAGGGGATCACA
rJMFF003J15+                                                         GAAGGGGATCACN
rJMFF023G24+          TGTGTGCTGCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTCGAAGGGGATCACA
rJMFF006A17+          TGTGTGCTGCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTCGAAGGGGATCACA
rJMFF009H15+          TGTGTGCTGCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTCGAAGGGGATCACA
rJMFF050M22+          TGTGTGCTGCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTCGAAGGGGATCACA
rJMFF042J15+          TGTGTGCTGCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTCGAAGGGGATCACA
JMFN034K11+           TGTGTGCTGCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTCGAAGGGGATCACA
                      ____________________________________________________________
consensus             TGTGTGCTGCTGCTCTTGTTGGGTTTCAAGAAAATGTCGGTAAGCTCGAAGGGGATCACA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          AAAAGGCTAAAACTTTAGCAGAGGGGCTTAACAAAATTAGCGGACTGGAATTTGATATGG
rJMFF023J06+          AAAAGGCTAAAACTTTAGCAGAGGGGCTTAACAAAATTAGCGGACTGGAAGTTGATATGG
rJMFF034N12+          AAAAGGCTAAAACTTTAGCAGAGGGGCTTAACAAAATTAGCGGACTGGAAGTTGATATGG
rJMFF020D04+          AAAAGGCTAAAACTTTAGCAGAGGGGCTTAACAAAATTAGCGGACTGGAAGTTGATATGG
rJMFF027L13+          AAAAGGNTAANACTTTAGCAGNGGGGNNTAACAAAATTAGCGGANTGGAAGTNGATATGG
rJMFF003J15+          ANAAGGNTAANACTTTAGCAGNGGGGNNTAACAANATTAGCGGNCTGGAAGNNGATANGG
rJMFF023G24+          AAAAGGCTAAAACTTTAGCAGAGGGGCTTAACAAAATTAGCGGACTGGAAGTTGATATGG
rJMFF006A17+          AAAAGGCTAAAACTTTAGCAGAGGGGCTTAACAAAATTAGCGGACTGGAAGTTGATATGG
rJMFF009H15+          AAAAGGCTAAAACTTTAGCAGAGGGGCTTAACAAAATTAGCGGACTGGAAGTTGATATGG
rJMFF050M22+          AAAAGGCTAAAACTTTAGCAGAGGGGCTTAACAAAATTAGCGGACTGGAAGTTGATATGG
rJMFF042J15+          AAAAGGCTAAAACTTTAGCAGAGGGGCTTAACAAAATTAGCGGACTGGAAGTTGATATGG
JMFN034K11+           AAAAGGCTAAAACTTTAGCAGAGGGGCTTAACAAAATTAGCGGACTGGAAGTTGATATGG
                      ____________________________________________________________
consensus             AAAAGGCTAAAACTTTAGCAGAGGGGCTTAACAAAATTAGCGGACTGGAAGTTGATATGG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          CTTCAGTAGAAACAAACATTGTATTCTGCGATATACTTAAGGAAGCAAACACAACTGAAA
rJMFF023J06+          CTTCAGTAGAAACAAACATTGTATTCTGCGATATACTTAAGGAAGCAAACACAACTGAAA
rJMFF034N12+          CTTCAGTAGAAACAAACATTGTATTCTGCGATATACTTAAGGAAGCAAACACAACTGAAA
rJMFF020D04+          CTTCAGTAGAAACAAACATNGTATTCTGCGATATACTTAAGGAAGCAAACACAACTGAAA
rJMFF027L13+          CTTCAGTAGAAACAANCATCGTATTNTNCGATATNCTTAAGGAAGCAANCACNACTGAAA
rJMFF003J15+          CTTCAGNAGAANCAACCATCGTATTNTNCGATATNCTTAAGGAAGCANNCACNACTGAAA
rJMFF023G24+          CTTCAGTAGAAACAAACATTGTATTCTGCGATATACTTAAGGAAGCAAACACAACTGAAA
rJMFF006A17+          CTTCAGTAGAAACAAACATTGTATTCTGCGATATACTTAAGGAAGCAA--ACAACTGAAA
rJMFF009H15+          CTTCAGTAGAAACAAACATTGTATTCTGCGATATACTTAAGGAAGCAAACACAACTGAAA
rJMFF050M22+          CTTCAGTAGAAACAAACATTGTATTCTGCGATATACTTAAGGAAGCAAACACAACTGAAA
rJMFF042J15+          CTTCAGTAGAAACAAACATTGTATTCTGCGATATACTTAAGGAAGCAAACACAACTGAAA
JMFN034K11+           CTTCAGTAGAAACAAACATTGTATTCTGCGATATACTTAAGGAAGCAAACACAACTGAAA
                      ____________________________________________________________
consensus             CTTCAGTAGAAACAAACATTGTATTCTGCGATATACTTAAGGAAGCAAACACAACTGAAA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          TGGAGCTGTGCAAGAGGCTAGCGGAACATGGTGTGCTCATTCTACCAGAAGGCCCAAAGA
rJMFF023J06+          TGGAGCTGTGCAAGAGGCTAGCGGAACATGGTGTGCTCATTCTACCAGAAGGCCCAAAGA
rJMFF034N12+          TGGAGCTGTGCAAGAGGCTAGCGGAACATGGTGTGCTCATTCTACCAGAAGGCCCAAAGA
rJMFF020D04+          TGGAGCTGTGCAAGAGGCTAGCGGAACATGGTGTGCTCATTCTACCAGAAGGCCCAAAGA
rJMFF027L13+          TGGAGCTGTGCAAGAGGCTAGCGGAACATNGTGTGNTCATTNTNCCAGNAGGCCCAAAGA
rJMFF003J15+          TGGAGCTGTGCAAGAGGCTAGCGGAACATNGTGTGNTCATTATTCCAGNAGGCCCAAAGA
rJMFF023G24+          TGGAGCTGTGCAAGAGGCTAGCGGAACATGGTGTGCTCATTCTACCAGAAGGCCCAAAGA
rJMFF006A17+          TGGAGCTGTGCAAGAGGCTAGCGGAACATGGTGTGCTCATTCTACCAGAAGGCCCAAAGA
rJMFF009H15+          TGGAGCTGTGCAAGAGGCTAGCGGAACATGGTGTGCTCATTCTACCAGAAGGCCCAAAGA
rJMFF050M22+          TGGAGCTGTGCAAGAGGCTAGCGGAACATGGTGTGCTCATTCTACCAGAAGGCCCAAAGA
rJMFF042J15+          TGGAGCTGTGCAAGAGGCTAGCGGAACATGGTGTGCTCATTCTACCAGAAGGCCCAAAGA
JMFN034K11+           TGGAGCTGTGCAAGAGGCTAGCGGAACATGGTGTGCTCATTCTACCAGAAGGCCCAAAGA
                      ____________________________________________________________
consensus             TGGAGCTGTGCAAGAGGCTAGCGGAACATGGTGTGCTCATTCTACCAGAAGGCCCAAAGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          GAATCAGGTTCGTGATTCACCACCAGATTTCCGACACTGATGTGCAGTATGCATTATCCC
rJMFF023J06+          GAATCAGGTTCGTGATTCACCACCAGATTTCCGACACTGATGTGCAGTATGCATTATCCC
rJMFF034N12+          GAATCAGGTTCGTGATTCACCACCAGATTTCCGACACTGATGTGCAGTATGCATTATCCC
rJMFF020D04+          GAATCAGGTTCGTGATTCACCACCAGATTTCCGACACTGATGTGCAGTATGCATTATCCC
rJMFF027L13+          GAATCAGGTTNGTGATTCNCCACCAGATTTCCGACACNGATGNGCAGNANGCATNATCCC
rJMFF003J15+          GAATCAGNNTCGTGATTCNCCACCAGATTTCCGACNCNGATGNGCAGNANGCATNATCCN
rJMFF023G24+          GAATCAGGTTCGTGATTCACCACCAGATTTCCGACACTGATGTGCAGTATGCATTATCCC
rJMFF006A17+          GAATCAGGTTCGTGATTCACCACCAGATTTCCGACACTGATGTGCAGTATGCATTATCCC
rJMFF009H15+          GAATCAGGTTCGTGATTCACCACCAGATTTCCGACACTGATGTGCAGTATGCATTATCCC
rJMFF050M22+          GAATCAGGTTCGTGATTCACCACCAGATTTCCGACACTGATGTGCAGTATGCATTATCCC
rJMFF042J15+          GAATCAGGTTCGTGATTCACCACCAGATTTCCGACACTGATGTGCAGTATGCATTATCCC
JMFN034K11+           GAATCAGGTTCGTGATTCACCACCAGATTTCCGACACTGATGTGCAGTATGCATTATCCC
                      ____________________________________________________________
consensus             GAATCAGGTTCGTGATTCACCACCAGATTTCCGACACTGATGTGCAGTATGCATTATCCC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          GAGTTCAGCGTGCTGTGACTGGAGTGGCAAATGGAAGCGGGGACCANTGAAATTGAGGGA
rJMFF023J06+          GAGTTCAGCGTGCTGTGACTGGAGTGGCAAATGGAAGCGGGGACCATTGAAATTGAGGGA
rJMFF034N12+          GAGTTCAGCGTGCTGTGACTGGAGTGGCAAATGGAAGCGGGGACCATTGAAATTGAGGGA
rJMFF020D04+          GAGTTCAGCGTGCTGTGACTGGAGTGGCAAATGGAAGCGGGGACCATTGAAATTGAGGGA
rJMFF027L13+          GAGTTCAGCGTGCTGTGACTGGAGTNGCAAATNGAAGCGGGGACCANCGAAATNGAGGGA
rJMFF003J15+          GAGTTCAGCGTGCTGTGACTGGAGTGGCAAANNGAAGCGGGGNCCANCGAAANNGAGGGA
rJMFF023G24+          GAGTTCAGCGTGCTGTGACTGGAGTGGCAAATGGAAGCGGGGACCATNGAAATTGAGGGA
rJMFF006A17+          GAGTTCAGCGTGCTGTGACTGGAGTGGCAAATGGAAGCGGGGACCATTGAAATTGAGGGA
rJMFF009H15+          GAGTTCAGCGTGCTGTGACTGGAGTGGCAAATGGAAGCGGGGACCATTGAAATTGAGGGA
rJMFF050M22+          GAGTTCAGCGTGCTGTGACTGGAGTGGCAAATGGAAGCGGGGACCATTGAAATTGAGGGA
rJMFF042J15+          GAGTTCAGCGTGCTGTGACTGGAGTGGCAAATGGAAGCGGGGACCATTGAAATTGAGGGA
JMFN034K11+           GAGTTCAGCGTGCTGTGACTGGAGTGGCAAATGGAAGCGGGGACCATTGAAATTGAGGGA
                      ____________________________________________________________
consensus             GAGTTCAGCGTGCTGTGACTGGAGTGGCAAATGGAAGCGGGGACCATTGAAATTGAGGGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          ATTGTTATCTCTGCTTCAAGATTTTCTATCTAGTAAAGAAGTGCAATATTCCAGTTGATC
rJMFF023J06+          ATTGTTATCTCTGCTTCAAGATTTTCTATCTAGTAAAGAAGTGCAATATTCCAGTTGATC
rJMFF034N12+          ATTGTTATCTCTGCTTCAAGATTTTCTATCTAGTAAAGAAGTGCAATATTCCAGTTGATC
rJMFF020D04+          ATTGTTATCTCTGCTTCAAGATTTTCTATCTAGTAAAGAAGTGCAATATTCCAGTTGATC
rJMFF027L13+          ATNGTTATCTNTNCTTCAAGATNTTCTATNTAGTAAAGAAGTNCAATATTCCAG      
rJMFF003J15+          ATNGTTATCTNTNCTTCAAGATNTTCTATNTAGTAAAGAAGTGCAATATTCCAGCNGATN
rJMFF023G24+          ATTGTTATCTCTGCTTCAAGATTTTCTATCTAGTAAAGAAGTGCAATATTCCAGTTGATC
rJMFF006A17+          ATTGTTATCTCTGCTTCAAGATTTTCTATCTAGTAAAGAAGTGCAATATTCCAGTTGATC
rJMFF009H15+          ATTGTTATCTCTGCTTCAAGATTTTCTATCTAGTAAAGAAGTGCAATATTCCAGTTGATC
rJMFF050M22+          ATTGTTATCTCTGCTTCAAGATTTTCTATCTAGTAAAGAAGTGCAATATTCCAGTTGATC
rJMFF042J15+          ATTGTTATCTCTGCTTCAAGATTTTCTATCTAGTAAAGAAGTGCAATATTCCAGTTGATC
JMFN034K11+           ATTGTTATCTCTGCTTCAAGATTTTCTATCTAGTAAAGAAGTGCAATATTCCAGTTGATC
                      ____________________________________________________________
consensus             ATTGTTATCTCTGCTTCAAGATTTTCTATCTAGTAAAGAAGTGCAATATTCCAGTTGATC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          TGCAGTTCATCTTCATCTTTAAGTAATTAAGAAGTTATCTGGTTATGTTTTATCCTGTTT
rJMFF023J06+          TGCAGTTCATCTTCATCTTTAAGTAATTAAGAAGTTATCTGGTTATGTTTTATCCTGTTT
rJMFF034N12+          TGCAGTTCATCTTCATCTTTAAGTAATTAAGAAGTTATCTGGTTATGTTTTATCCTGTTT
rJMFF020D04+          TGCAGTTCATCTTCATCTTTAAGTAATTAAGAAGTTATCTGGTTATGTTTTATCCTGTTT
rJMFF003J15+          NNCAGNTCATCNTCATCNTTAAGTAATTAAGAAG                          
rJMFF023G24+          TGCAGTTCATCTTCATCTTTAAGTAATTAAGAAGTTATCTGGTTATGTTTTATCCTGTTT
rJMFF006A17+          TGCAGTTCATCTTCATCTTTAAGTAATTAAGAAGTTATCTGGTTATGTTTTATCCTGTTT
rJMFF009H15+          TGCAGTTCATCTTCATCTTTAAGTAATTAAGAAGTTATCTGGTTATGTTTTATCCTGTTT
rJMFF050M22+          TGCAGTTCATCTTCATCTTTAAGTAATTAAGAAGTTATCTGGTTATGTTTTATCCTGTTT
rJMFF042J15+          TGCAGTTCATCTTCATCTTTAAGTAATTAAGAAGTTATCTGGTTATGTTTTATCCTGTTT
JMFN034K11+           TGCAGTTCATCTTCATCTTTAAGTAATTAAGAAGTTATCTGGTTATGTTTTATCCTGTTT
                      ____________________________________________________________
consensus             TGCAGTTCATCTTCATCTTTAAGTAATTAAGAAGTTATCTGGTTATGTTTTATCCTGTTT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF023B04+          TATTTTATGATGCCTAGACTCATATGGCCANTAGGCCAG                     
rJMFF023J06+          TATTTTATGATGCCTAGACTCATATGGCCAGTAGGCCAGAA                   
rJMFF034N12+          TATTTTATGATGCCTAGACTCATATGGCCAGTAGGCCAGAATGCAA              
rJMFF020D04+          TATTTTATGATGCCTAGACTCATATGGCCAGTAGGCCAGAATGCAA              
rJMFF023G24+          TATTTTATGATGCCTAGACTCATATGGCCAGTAGGCCAGAATGCAA              
rJMFF006A17+          TATTTTATGATGCCTAGACTCATATGGCCAGTAGGCCAGAATGCAATGATGAAGTTT   
rJMFF009H15+          TATTTTATGATGCCTAGACTCATATGGCCAGTAGGCCAGAATGCAATGATGAAGTTTCAT
rJMFF050M22+          TATTTTATGATGCCTAGACTCATATGGCCAGTAGGCCAGAATGCAATGATGAAGTTTCAT
rJMFF042J15+          TATTTTATGATGCCTAGACTCATATGGCCAGTAGGCCAGAATGCAATGATGAAGTTTTAT
JMFN034K11+           TATTTTATGATGCCTAGACTCATATGGCCAGTAGGCCAGAATGCAATGATGAAGTTTCAT
                      ____________________________________________________________
consensus             TATTTTATGATGCCTAGACTCATATGGCCAGTAGGCCAGAATGCAATGATGAAGTTTCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMFF009H15+          T                                                           
rJMFF050M22+          TTAGAG                                                      
rJMFF042J15+          TTAGAGAA                                                    
JMFN034K11+           TTAGAGAAGAAAGATCTGATGATTXXXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
                      ____________________________________________________________
consensus             TTAGAGAAGAAAGATCTGATGATTNNNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC