Contig 011711:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN033P02Sequence424011711 (3)
JMSF046A15Sequence349011711 (3)663011711 (3)

Alignment

This contig is upended


. : . : . : . : . : . :
JMSF046A15- GAAACCCTACCCTTCGATTTATTC
                      ____________________________________________________________
consensus GAAACCCTACCCTTCGATTTATTC
 
. : . : . : . : . : . :
JMSF046A15- CGTCCGCCTCCTTCTCTCTCGGCTAAGGAACCATGAGGGCACGATTGGCTTTCTTCTCCC
                      ____________________________________________________________
consensus CGTCCGCCTCCTTCTCTCTCGGCTAAGGAACCATGAGGGCACGATTGGCTTTCTTCTCCC
 
. : . : . : . : . : . :
JMSF046A15- TTCTTGTGACGNCATCGGCATCAACTCCATCTCTTCCCTTCTTCCCTTCGGTGTTCCGGA
                      ____________________________________________________________
consensus TTCTTGTGACGNCATCGGCATCAACTCCATCTCTTCCCTTCTTCCCTTCGGTGTTCCGGA
 
. : . : . : . : . : . :
JMSF046A15- ATGGGCAGAGCTGTGCGGTGGAGGTTGACTTCATCCCTTCTCTGGCAATGAACCATCTAC
rJMSF046A15+ TTCTCTGGCAATGAACCATCTAC
                      ____________________________________________________________
consensus ATGGGCAGAGCTGTGCGGTGGAGGTTGACTTCATCCCTTCTCTGGCAATGAACCATCTAC
 
. : . : . : . : . : . :
JMSF046A15- GACGAANCTTTCCAGCAGAACAGCGGTGGCGATGGCNGGTCTTGGCANCAGCTGCAACGG
rJMSF046A15+ GACGAAGCTTTCCAGCAGAACAGCGGTGGCGATGGCGGGTCTTGGCAGCAGCTGCAACGG
                      ____________________________________________________________
consensus GACGAAGCTTTCCAGCAGAACAGCGGTGGCGATGGCGGGTCTTGGCAGCAGCTGCAACGG
 
. : . : . : . : . : . :
JMSF046A15- AGGGCTTCTATCAACTCCGGCNGCNGAACATCGGTCTGGTCCGGCGTAACANTTCCTATG
rJMSF046A15+ AGGGCTTCTATCAACTCCGGCGGCGGAACATCGGTCTGGTCCGGCGTAGCAGTTCCTATG
                      ____________________________________________________________
consensus AGGGCTTCTATCAACTCCGGCGGCGGAACATCGGTCTGGTCCGGCGTAGCAGTTCCTATG
 
. : . : . : . : . : . :
JMSF046A15- GCGGTGGCTTGTCCTCCAGTGAAGC
rJMSF046A15+ GCGGTGGCTTGTCCTCCAGTGAAGCAGAGCATGTAGCGGGCGGTGACGCGGGTGGAGGTG
                      ____________________________________________________________
consensus GCGGTGGCTTGTCCTCCAGTGAAGCAGAGCATGTAGCGGGCGGTGACGCGGGTGGAGGTG
 
. : . : . : . : . : . :
rJMSF046A15+ CTCCCCATGTTCCACCGCGGTATCTCCACCTCGAAGCCACGGTGGTGGATGTTTCTCCGG
                      ____________________________________________________________
consensus CTCCCCATGTTCCACCGCGGTATCTCCACCTCGAAGCCACGGTGGTGGATGTTTCTCCGG
 
. : . : . : . : . : . :
rJMSF046A15+ CGAGGCAGCTCTGACGGTGGTGGGTATCTCTCCGGCGAAGCAGAATGGCGGCAAGGTGGC
                      ____________________________________________________________
consensus CGAGGCAGCTCTGACGGTGGTGGGTATCTCTCCGGCGAAGCAGAATGGCGGCAAGGTGGC
 
. : . : . : . : . : . :
rJMSF046A15+ TGGTGGTTGACGCCGGCAGGGTCCAAGGTGGCAGTGCGAAGAAGATGGGGTTTTCGTTTG
JMFN033P02+ TGGTTCCCGTTTG
                      ____________________________________________________________
consensus TGGTGGTTGACGCCGGCAGGGTCCAAGGTGGCAGTGCGAAGAAGATGTGGTTTTCGTTTG
 
. : . : . : . : . : . :
rJMSF046A15+ GCTTATGAGTTGAGCTTAGCCTATGATGGCGCTGTTTTTGGATGTTAAGCGAATGAGGTT
JMFN033P02+ GCTTATGAGTTGAGCCTAGCCTAAGTTGGCATTGTTTTTGGATGTTAAGCGAATGAGGTT
                      ____________________________________________________________
consensus GCTTATGAGTTGAGCTTAGCCTATGTTGGCGTTGTTTTTGGATGTTAAGCGAATGAGGTT
 
. : . : . : . : . : . :
rJMSF046A15+ GGGTAGCTTTGGAGAGCGCGCTAGTGGCCTGTAGATAGATT-ATCTCTTCCTTTAATAGT
JMFN033P02+ GGGTAGCTTTGGAGAGCGCGCTAGTGGCCTGTAGATAGTTTAATATTTTCCTCTAATAGT
                      ____________________________________________________________
consensus GGGTAGCTTTGGAGAGCGCGCTAGTGGCCTGTAGATAGTTTAATCTTTTCCTTTAATAGT
 
. : . : . : . : . : . :
rJMSF046A15+ TGTTGAGGCCTGTGAGCCTAAGTAGTTGATTTATTAGACTGTTGTAGTTGTAGTATCTGC
JMFN033P02+ TGTTGAGGCCTGTGAGCCCAAGTAGTTGATTCGTTAGACTGCTGTAGTTGTAGTATCTAC
                      ____________________________________________________________
consensus TGTTGAGGCCTGTGAGCCTAAGTAGTTGATTTGTTAGACTGTTGTAGTTGTAGTATCTGC
 
. : . : . : . : . : . :
rJMSF046A15+ CTGTGCACCTATGTTTGATATAGGTGTGGCATAGCA
JMFN033P02+ CTGTGCACCTATGTTTGATATAGGTGTGGCATAGCACCTTCCGGTTTGTTTAGTTAGCTT
                      ____________________________________________________________
consensus CTGTGCACCTATGTTTGATATAGGTGTGGCATAGCACCTTCCGGTTTGTTTAGTTAGCTT
 
. : . : . : . : . : . :
JMFN033P02+ CCGCCTTGTTTAATCTTAATGAGTAGACTTTATCTCTTTTAAGCTTTAAAAAAAAAAAAA
                      ____________________________________________________________
consensus CCGCCTTGTTTAATCTTAATGAGTAGACTTTATCTCTTTTAAGCTTTAAAAAAAAAAAAA