Contig 011710:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN007C18Sequence640011710 (8)ref|XP_006339328.1|2e-62PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein
JMFN010D03Sequence642011710 (8)ref|XP_006339328.1|2e-62PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein
JMFN010D24Sequence634011710 (8)ref|XP_006339328.1|2e-62PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein
JMFN017K21Sequence628011710 (8)ref|XP_006339328.1|2e-62PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein
JMFN031N10Sequence622011710 (8)ref|XP_006339328.1|2e-62PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein
JMFN033K17Sequence644011710 (8)ref|XP_006339328.1|2e-62PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein
JMFN036M24Sequence535011710 (8)ref|XP_011094191.1|6e-30PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein
JMFS156C10Sequence613011710 (8)ref|XP_006339328.1|1e-62PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein

Alignment

This contig is upended


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JMFN036M24+                                                         AAGTAGCAGCAGAG
                      ____________________________________________________________
consensus                                                           AAGTAGCAGCAGAG
 
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JMFN036M24+           ACATAGCTGAGAAGATATATGCCCGGCCACGCATTGCTTGTCTAAGGTATTGTACAAACC
JMFS156C10+                                                               TACAAACC
JMFN017K21+                                                                  AAACC
JMFN007C18+                                                                    ACC
JMFN010D03+                                                                  AAACC
                      ____________________________________________________________
consensus             ACATAGCTGAGAAGATATATGCCCGGCCACGCATTGCTTGTCTAAGGTATTGTACAAACC
 
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JMFN036M24+           AGACAAAAAGACACTGGGAAGAACAACGAAAGGGATCACATTGATAGTGGGAGGACTACA
JMFS156C10+           AGACAAAAAGACACTGGGAAGAACAACGAAAGGGATCACATTGATAGTGGGAGGACTACA
JMFN017K21+           AGACAAAAAGACACTGGGAAGAACAACGAAAGGGATCACATTGATAGTGGGAGGACTACA
JMFN031N10+           AGACAAAAAGACACTGGGAAGAACAACGAAAGGGATCACATTGATAGTGGGAGGACTACA
JMFN007C18+           AGACAAAAAGACACTGGGAAGAACAACGAAAGGGATCACATTGATAGTGGGAGGACTACA
JMFN010D03+           AGACAAANAGACACTGGGAAGAACAACGAAAGGGATCACATTGATAGTGGGAGGACTACA
JMFN010D24+                         TGGGAAGANCAACGAAAGGGATCACATTGATAGTGGGAGGACTACA
JMFN033K17+                           GGAAAAACAACGAAAGGGATCACATTGATAGTGGGAGGACTACA
                      ____________________________________________________________
consensus             AGACAAAAAGACACTGGGAAGAACAACGAAAGGGATCACATTGATAGTGGGAGGACTACA
 
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JMFN036M24+           ATAACAAGTAGGTGATGAGTCCTCAAGTGCCTAGCTATCAGCAACTGCCTTGGGTTCCTC
JMFS156C10+           ATAACAAGTAGGTGATGAGTCCTCAAGTGCCTAGCTATCAGCAACTGCCTTGGGTTCCTC
JMFN017K21+           ATAACAAGTAGGTGATGAGTCCTCAAGTGCCTAGCTATCAGCAACTGCCTTGGGTTCCTC
JMFN031N10+           ATAACAAGTAGGTGATGAGTCCTCAAGTGCCTAGCTATCAGCAACTGCCTTGGGTTCCTC
JMFN007C18+           ATAACAAGTAGGTGATGAGTCCTCAAGTGCCTAGCTATCAGCAACTGCCTTGGGTTCCTC
JMFN010D03+           ATAACAAGTAGGTGATGAGTCCTCAAGTGCCTAGCTATCAGCAACTGCCTTGGGTTCCTC
JMFN010D24+           ATAACAAGTAGGTGATGAGTCCTCAAGTGCCTAGCTATCAGCAACTGCCTTGGGTTCCTC
JMFN033K17+           ATAACAAGTAGGTGATGAGTCCTCAAGTGCCTAGCTATCAGCAACTGCCTTGGGTTCCTC
                      ____________________________________________________________
consensus             ATAACAAGTAGGTGATGAGTCCTCAAGTGCCTAGCTATCAGCAACTGCCTTGGGTTCCTC
 
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JMFN036M24+           TGCAAGAAATCCGATGCTGAAGTCGAAGGTGATACATGACAACTCGTTGTTCTTTTCATC
JMFS156C10+           TGCAAGAAATCCGATGCTGAAGTCGAAGGTGATACATGACAACTCGTTGTTCTTTTCATC
JMFN017K21+           TGCAAGAAATCCGATGCTGAAGTCGAAGGTGATACATGACAACTCGTTGTTCTTTTCATC
JMFN031N10+           TGCAAGAAATCCGATGCTGAAGTCGAAGGTGATACATGACAACTCGTTGTTCTTTTCATC
JMFN007C18+           TGCAAGAAATCCGATGCTGAAGTCGAAGGTGATACATGACAACTCGTTGTTCTTTTCATC
JMFN010D03+           TGCAAGAAATCCGATGCTGAAGTCGAAGGTGATACATGACAACTCGTTGTTCTTTTCATC
JMFN010D24+           TGCAAGAAATCCGATGCTGAAGTCGAAGGTGATACATGACAACTCGTTGTTCTTTTCATC
JMFN033K17+           TGCAAGAAATCCGATGCTGAAGTCGAAGGTGATACATGACAACTCGTTGTTCTTTTCATC
                      ____________________________________________________________
consensus             TGCAAGAAATCCGATGCTGAAGTCGAAGGTGATACATGACAACTCGTTGTTCTTTTCATC
 
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JMFN036M24+           CTTCACTTTCATTGTAGGAGTGTAGGAGCCCGGGGGTGTATACCCAGGCAAAGCTTGGGT
JMFS156C10+           CTTCACTTTCATTGTAAGAGTGTAGGAGCCCGGGGGTGTATACCCAGGCAAAGCTTGGGT
JMFN017K21+           CTTCACTTTCATTGTAAGAGTGTAGGAGCCCGGGGGTGTATACCCAGGCAAAGCTTGGGT
JMFN031N10+           CTTCACTTTCATTGTAAGAGTGTAGGAGCCCGGGGGTGTATACCCAGGCAAAGCTTGGGT
JMFN007C18+           CTTCACTTTCATTGTAAGAGTGTAGGAGCCCGGGGGTGTATACCCAGGCAAAGCTTGGGT
JMFN010D03+           CTTCACTTTCATTGTAAGAGTGTAGGAGCCCGGGGGTGTATACCCAGGCAAAGCTTGGGT
JMFN010D24+           CTTCACTTTCATTGTAAGAGTGTAGGAGCCCGGGGGTGTATACCCAGGCAAAGCTTGGGT
JMFN033K17+           CTTCACTTTCATTGTAAGAGTGTAGGAGCCCGGGGGTGTATACCCAGGCAAAGCTTGGGT
                      ____________________________________________________________
consensus             CTTCACTTTCATTGTAAGAGTGTAGGAGCCCGGGGGTGTATACCCAGGCAAAGCTTGGGT
 
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JMFN036M24+           GTGTGCAATGACAAAATCACCAGCAGGAATAGGGCAAGATGTCTCTGAACAGAGGTCGTG
JMFS156C10+           GTGTGCAATGACAAAATCACCAGCAGGAATAGGGCAAGATGTCTCTGAACAGAGGTCGTG
JMFN017K21+           GTGTGCAATGACAAAATCACCAGCAGGAATAGGGCAAGATGTCTCTGAACAGAGGTCGTG
JMFN031N10+           GTGTGCAATGACAAAATCACCAGCAGGAATAGGGCAAGATGTCTCTGAACAGAGGTCGTG
JMFN007C18+           GTGTGCAATGACAAAATCACCAGCAGGAATAGGGCAAGATGTCTCTGAACAGAGGTCGTG
JMFN010D03+           GTGTGCAATGACAAAATCACCAGCAGGAATAGGGCAAGATGTCTCTGAACAGAGGTCGTG
JMFN010D24+           GTGTGCAATGACAAAATCACCAGCAGGAATAGGGCAAGATGTCTCTGAACAGAGGTCGTG
JMFN033K17+           GTGTGCAATGACAAAATCACCAGCAGGAATAGGGCAAGATGTCTCTGAACAGAGGTCGTG
                      ____________________________________________________________
consensus             GTGTGCAATGACAAAATCACCAGCAGGAATAGGGCAAGATGTCTCTGAACAGAGGTCGTG
 
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JMFN036M24+           GTCCTCACTGTAGACGCTAAAGAAGAAGTATTTGACTTCAACCGTCAGTTTTCCTGAAGA
JMFS156C10+           GTCCTCACTGTAGACGCTAAAGAAGAAGTATTTGACTTCAACCGTCAGTTTTCCTGAAGA
JMFN017K21+           GTCCTCACTGTAGACGCTAAAGAAGAAGTATTTGACTTCAACCGTCAGTTTTCCTGAAGA
JMFN031N10+           GTCCTCACTGTAGACGCTAAAGAAGAAGTATTTGACTTCAACCGTCAGTTTTCCTGAAGA
JMFN007C18+           GTCCTCACTGTAGACGCTAAAGAAGAAGTATTTGACTTCAACCGTCAGTTTTCCTGAAGA
JMFN010D03+           GTCCTCACTGTAGACGCTAAAGAAGAAGTATTTGACTTCAACCGTCAGTTTTCCTGAAGA
JMFN010D24+           GTCCTCACTGTAGACGCTAAAGAAGAAGTATTTGACTTCAACCGTCAGTTTTCCTGAAGA
JMFN033K17+           GTCCTCACTGTAGACGCTAAAGAAGAAGTATTTGACTTCAACCGTCAGTTTTCCTGAAGA
                      ____________________________________________________________
consensus             GTCCTCACTGTAGACGCTAAAGAAGAAGTATTTGACTTCAACCGTCAGTTTTCCTGAAGA
 
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JMFN036M24+           TATGCTTTTATCTGTGGAAGCAGCTATACTGAAAGTGGTGTCCACACTTC-TTGCACAGG
JMFS156C10+           TATGCTTTTATCTGTGGAAGCAGCTATACTGAAAGTGGTGTCCACACTTCTTTGCACAGG
JMFN017K21+           TATGCTTTTATCTGTGGAAGCAGCTATACTGAAAGTGGTGTCCACACTTCTTTGCACAGG
JMFN031N10+           TATGCTTTTATCTGTGGAAGCAGCTATACTGAAAGTGGTGTCCACACTTCTTTGCACAGG
JMFN007C18+           TATGCTTTTATCTGTGGAAGCAGCTATACTGAAAGTGGTGTCCACACTTCTTTGCACAGG
JMFN010D03+           TATGCTTTTATCTGTGGAAGCAGCTATACTGAAAGTGGTGTCCACACTTCTTTGCACAGG
JMFN010D24+           TATGCTTTTATCTGTGGAAGCAGCTATACTGAAAGTGGTGTCCACACTTCTTTGCACAGG
JMFN033K17+           TATGCTTTTATCTGTGGAAGCAGCTATACTGAAAGTGGTGTCCACACTTCTTTGCACAGG
                      ____________________________________________________________
consensus             TATGCTTTTATCTGTGGAAGCAGCTATACTGAAAGTGGTGTCCACACTTCTTTGCACAGG
 
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JMFN036M24+           AGAAGGTGTTATGTCAACTCCAGTGAC                                 
JMFS156C10+           AGAAGGTGTTATGTCAACTCCAGTGACCTTCACATCATAGTTCTTCTTCTTGCTGCAATA
JMFN017K21+           AGAAGGTGTTATGTCAACTCCAGTGACCTTCACATCATAGTTCTTCTTCTTGCTGCAATA
JMFN031N10+           AGAAGGTGTTATGTCAACTCCAGTGACCTTCACATCATAGTTCTTCTTCTTGCTGCAATA
JMFN007C18+           AGAAGGTGTTATGTCAACTCCAGTGACCTTCACATCATAGTTCTTCTTCTTGCTGCAATA
JMFN010D03+           AGAAGGTGTTATGTCAACTCCAGTGACCTTCACATCATAGTTCTTCTTCTTGCTGCAATA
JMFN010D24+           AGAAGGTGTTATGTCAACTCCAGTGACCTTCACATCATAGTTCTTCTTCTTGCTGCAATA
JMFN033K17+           AGAAGGTGTTATGTCAACTCCAGTGACCTTCACATCATAGTTCTTCTTCTTGCTGCAATA
                      ____________________________________________________________
consensus             AGAAGGTGTTATGTCAACTCCAGTGACCTTCACATCATAGTTCTTCTTCTTGCTGCAATA
 
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JMFS156C10+           CTGAAAGTCATTGGACGTGGCTGAGCTCAGAGGAAAGATCGCACAGAGAGACAATACAAG
JMFN017K21+           CTGAAAGTCATTGGACGTGGCTGAGCTCAGAGGAAAGATCGCACAGAGAGACAATACAAG
JMFN031N10+           CTGAAAGTCATTGGACGTGGCTGAGCTCAGAGGAAAGATCGCACAGAGAGACAATACAAG
JMFN007C18+           CTGAAAGTCATTGGACGTGGCTGAGCTCAGAGGAAAGATCGCACAGAGAGACAATACAAG
JMFN010D03+           CTGAAAGTCATTGGACGTGGCTGAGCTCAGAGGAAAGATCGCACAGAGAGACAATACAAG
JMFN010D24+           CTGAAAGTCATTGGACGTGGCTGAGCTCAGAGGAAAGATCGCACAGAGAGACAATACAAG
JMFN033K17+           CTGAAAGTCATTGGACGTGGCTGAGCTCAGAGGAAAGATCGCACAGAGAGACAATACAAG
                      ____________________________________________________________
consensus             CTGAAAGTCATTGGACGTGGCTGAGCTCAGAGGAAAGATCGCACAGAGAGACAATACAAG
 
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JMFS156C10+           GACAACGATGAATTTCAGTTCCGCCATTAATGATCAGAAAAGAGAGAGAGAGCGA     
JMFN017K21+           GACAACGATGAATTTCAGTTCCGCCATTAATGATCAGAAAAGAGAGAGAGAGCGAGAGAG
JMFN031N10+           GACAACGATGAATTTCAGTTCCGCCATTAATGATCAGAAAAGAGAGAGAGAGCGAGAGAG
JMFN007C18+           GACAACGATGAATTTCAGTTCCGCCATTAATGATCAGAAAAGAGAGAGAGAGCGAGAGAG
JMFN010D03+           GACAACGATGAATTTCAGTTCCGCCATTAATGATCAGAAAAGAGAGAGAGAGCGAGAGAG
JMFN010D24+           GACAACGATGAATTTCAGTTCCGCCATTAATGATCAGAAAAGAGAGAGAGAGCGAGAGAG
JMFN033K17+           GACAACGATGAATTTCAGTTCCGCCATTAATGATCAGAAAAGAGAGAGAGAGCGAGAGAG
                      ____________________________________________________________
consensus             GACAACGATGAATTTCAGTTCCGCCATTAATGATCAGAAAAGAGAGAGAGAGCGAGAGAG
 
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JMFN017K21+           CAGTAGCAGACTTGCAGACGAA                                      
JMFN031N10+           CAGTAGCAGACTTGCAGACGAA                                      
JMFN007C18+           CAGTAGCAGACTTGCAGACGAAGGAGGGTCGGTGAAG                       
JMFN010D03+           CAGTAGCAGACTTGCAGACGAAGGAGGGTCGGTGAAG                       
JMFN010D24+           CAGTAGCAGACTTGCAGACGAAGGAGGGTCGGTGAAGAGAGTAGAAAG            
JMFN033K17+           CAGTAGCAGACTTGCAGACGAAGGAGGGTCGGTGAAGAGAGTAGAAAGGAATCAGGAGTG
                      ____________________________________________________________
consensus             CAGTAGCAGACTTGCAGACGAAGGAGGGTCGGTGAAGAGAGTAGAAAGGAATCAGGAGTG