Contig 011707:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN013P17Sequence507011707 (2)
JMFN032K07Sequence628011707 (2)ref|XP_009770623.1|2e-09PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Nicotiana sylvestris

Alignment

This contig is upended


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JMFN013P17+                                                       AAATTTATTACTTAAA
                      ____________________________________________________________
consensus                                                         AAATTTATTACTTAAA
 
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JMFN013P17+           AAAATGTGTAAATCATCACAAAACGTTACTCAAAAAAAAAAAAAACATTACATGTTATTG
                      ____________________________________________________________
consensus             AAAATGTGTAAATCATCACAAAACGTTACTCAAAAAAAAAAAAAACATTACATGTTATTG
 
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JMFN013P17+           ACTTAATCATTAAGCAATTTAAAATACAGTGAAATACAAATATAATATCACTTAATTCAT
JMFN032K07+                                     CAGTGAAATACAAATATAATATCACTCAATTCAT
                      ____________________________________________________________
consensus             ACTTAATCATTAAGCAATTTAAAATACAGTGAAATACAAATATAATATCACTTAATTCAT
 
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JMFN013P17+           TCTCTTAATCATCCATCATATGTTACAATAATCTATCAAGTACTAATATTATTATTATTA
JMFN032K07+           TCTCTTAATCATCCATCATATGGTACAATAATCTATCAAGTACTAATATTATTA------
                      ____________________________________________________________
consensus             TCTCTTAATCATCCATCATATGTTACAATAATCTATCAAGTACTAATATTATTATTATTA
 
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JMFN013P17+           TTATTATTATTATTATTAAATAATAGTCGCATGCTGCATATTTCACTTTTTCAACGAATG
JMFN032K07+           ------TGATTAGTATTAAATAATAGTCGCATGCTGCATGTTTCACTTCTTCACCGAATG
                      ____________________________________________________________
consensus             TTATTATTATTATTATTAAATAATAGTCGCATGCTGCATGTTTCACTTTTTCACCGAATG
 
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JMFN013P17+           TGTTGGGTTTTCACTCAGCTGCCTCCCAGGTACTCACGTAGCATGTGTTACATTGAATTA
JMFN032K07+           TGTTGGATCTTCACTCAGCTGCCTCCCACGTACTCACGTAGCATGTGTTACATTGGATTA
                      ____________________________________________________________
consensus             TGTTGGGTTTTCACTCAGCTGCCTCCCAGGTACTCACGTAGCATGTGTTACATTGGATTA
 
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JMFN013P17+           TCTCCACTTCATGCCATATTTCTCTCCAACTTTTCTTTTAGTATAAATAGCAATTGCTTT
JMFN032K07+           TCTCCACTTCATGCCATATTTCTCTCCAACTTTTCTTTTAGTATAAATAGCAATTGCTTT
                      ____________________________________________________________
consensus             TCTCCACTTCATGCCATATTTCTCTCCAACTTTTCTTTTAGTATAAATAGCAATTGCTTT
 
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JMFN013P17+           TCCT                                                        
JMFN032K07+           TCCTGGCCGAGTCCGCCCCTTGATTGACATATCTGGAATGGTCAGGATCGGACCATCCAT
                      ____________________________________________________________
consensus             TCCTGGCCGAGTCCGCCCCTTGATTGACATATCTGGAATGGTCAGGATCGGACCATCCAT
 
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JMFN032K07+           AAGAAAAACCGATACGGTTGGTACCAGAACCGTAACGAACCCGTTTAAGTCGTAGTATGT
                      ____________________________________________________________
consensus             AAGAAAAACCGATACGGTTGGTACCAGAACCGTAACGAACCCGTTTAAGTCGTAGTATGT
 
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JMFN032K07+           GTCGAATATTGAGACGCTGGGTGCCCGCAAAACGGATTGTTTAACGTTGAAATGGTGGTG
                      ____________________________________________________________
consensus             GTCGAATATTGAGACGCTGGGTGCCCGCAAAACGGATTGTTTAACGTTGAAATGGTGGTG
 
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JMFN032K07+           AGTGGGAAAGGGGATGGTGTGGCCGGCTGAGGTATTGGTTTCGGTTGCGGAGGTTGTAAA
                      ____________________________________________________________
consensus             AGTGGGAAAGGGGATGGTGTGGCCGGCTGAGGTATTGGTTTCGGTTGCGGAGGTTGTAAA
 
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JMFN032K07+           GAAAAACAGTGAGAGGAGGATATGGATCGGACAAGCATTATGAAGTAGATTAGATGTTTA
                      ____________________________________________________________
consensus             GAAAAACAGTGAGAGGAGGATATGGATCGGACAAGCATTATGAAGTAGATTAGATGTTTA
 
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JMFN032K07+           AGCTTAAGCAAATTAAAGGTCTCATAGATAGATAGTGATGAGGTTGTTGGAAGAGTTGCA
                      ____________________________________________________________
consensus             AGCTTAAGCAAATTAAAGGTCTCATAGATAGATAGTGATGAGGTTGTTGGAAGAGTTGCA