| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFN004J04 | Sequence | 516 | 011702 (12) | ref|XP_009607031.1| | 4e-49 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif | |||||
| JMFN007A02 | Sequence | 536 | 011702 (12) | ref|XP_009607031.1| | 4e-49 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif | |||||
| JMFN013B13 | Sequence | 522 | 011702 (12) | ref|XP_009607031.1| | 4e-49 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif | |||||
| JMFN028F08 | Sequence | 556 | 011702 (12) | ref|XP_009607031.1| | 4e-49 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif | |||||
| JMFN029P15 | Sequence | 531 | 011702 (12) | ref|XP_009607031.1| | 3e-49 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif | |||||
| JMFN036G04 | Sequence | 526 | 011702 (12) | ref|XP_009607031.1| | 3e-49 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif | |||||
| JMFN043M19 | Sequence | 533 | 011702 (12) | ref|XP_009607031.1| | 4e-49 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif | |||||
| JMFN045E13 | Sequence | 520 | 011702 (12) | ref|XP_009607031.1| | 3e-49 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif | |||||
| JMFN046C14 | Sequence | 534 | 011702 (12) | ref|XP_009607031.1| | 3e-49 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif | |||||
| JMSF025L21 | Sequence | 558 | 011702 (12) | ref|XP_009607031.1| | 4e-49 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif | 507 | 011702 (12) | ref|XP_009607031.1| | 2e-49 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif |
| JMSF029P06 | Sequence | 632 | 016812 | ref|XP_010091880.1| | 9e-07 | hypothetical protein L484_009496 [Morus notabilis] gb|EXB46347.1| hypothetical p | 464 | 011702 (12) | ref|XP_009607031.1| | 5e-30 | PREDICTED: macrophage migration inhibitory factor homolog [Nicotiana tomentosif |
This contig is upended
. : . : . : . : . : . :
JMFN029P15+ AAATAGCCAAGCCAATGCATATT
JMFN036G04+ AGCCAAGCCAATGCATATT
JMFN007A02+ GCCAAGCCAATGCATATT
JMFN013B13+ AGCCAAGCCAATGCATATT
JMFN004J04+ AGCCAAGCCAATGCATATT
JMFN043M19+ AGCCAAGCCAATGCATATT
JMFN046C14+ GCCAAGCCAATGCATATT
JMFN045E13+ GCCAAGCCAATGCATATT
JMSF025L21+ GCCAAGCCAATGCATATT
JMFN028F08+ CAAGCCAATGCATATT
____________________________________________________________
consensus AAATAGCCAAGCCAATGCATATT
. : . : . : . : . : . :
JMFN029P15+ CATTTTACTGCATCAAGGGTACAACATTACAATCATCAAACTAAGACCTTATTATGCTTG
JMFN036G04+ CATTTTACTGCATCAAGGGTACAACATTACAATCATCAAACTAAGACCTTATTATGCTTG
JMFN007A02+ CATTTTACTGCATCAAGGGTACAACATTACAATCATCAAACTAAGACCTTATTATGCTTG
JMFN013B13+ CATTTTACTGCATCAAGGGTACAACATTACAATCATCAAACTAAGACCTTATTATGCTTG
JMFN004J04+ CATTTTACTGCATCAAGGGTACAACATTACAATCATCAAACTAAGACCTTATTATGCTTG
rJMSF029P06- ACATTACAATCATCAAACTAAGACCTTATTATGCTTG
JMFN043M19+ CATTTTACTGCATCAAGGGTACAACATTACAATCATCAAACTAAGACCTTATTATGCTTG
JMFN046C14+ CATTTTACTGCATCAAGGGTACAACATTACAATCATCAAACTAAGACCTTATTATGCTTG
JMFN045E13+ CATTTTACTGCATCAAGGGTACAACATTACAATCATCAAACTAAGACCTTATTATGCTTG
rJMSF025L21- ACATTACAATCATCAAACTAAGACCTTATTATGCTTG
JMSF025L21+ CATTTTACTGCATCAAGGGTACAACATTACAATCATCAAACTAAGACCTTATTATGCTTG
JMFN028F08+ CATTTTACTGCATCAAGGGTACAACATTACAATCATCAAACTAAGACCTTATTATGCTTG
____________________________________________________________
consensus CATTTTACTGCATCAAGGGTACAACATTACAATCATCAAACTAAGACCTTATTATGCTTG
. : . : . : . : . : . :
JMFN029P15+ TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
JMFN036G04+ TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
JMFN007A02+ TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
JMFN013B13+ TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
JMFN004J04+ TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
rJMSF029P06- TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
JMFN043M19+ TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
JMFN046C14+ TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
JMFN045E13+ TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
rJMSF025L21- TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
JMSF025L21+ TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
JMFN028F08+ TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
____________________________________________________________
consensus TTGAACACAGATCAAATGACTTTTGACTACATTTTGGACAATCTTTTTGCCAGTGTGGTA
. : . : . : . : . : . :
JMFN029P15+ TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
JMFN036G04+ TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
JMFN007A02+ TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
JMFN013B13+ TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
JMFN004J04+ TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
rJMSF029P06- TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
JMFN043M19+ TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
JMFN046C14+ TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
JMFN045E13+ TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
rJMSF025L21- TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
JMSF025L21+ TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
JMFN028F08+ TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
____________________________________________________________
consensus TCGTAGACCTTGAGGACGAAGCGAGCTCTGGGAATGGAGAGTTTGTTCTCCAGAATTGTG
. : . : . : . : . : . :
JMFN029P15+ CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
JMFN036G04+ CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
JMFN007A02+ CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
JMFN013B13+ CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
JMFN004J04+ CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
rJMSF029P06- CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
JMFN043M19+ CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
JMFN046C14+ CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
JMFN045E13+ CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
rJMSF025L21- CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
JMSF025L21+ CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
JMFN028F08+ CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
____________________________________________________________
consensus CCAATGGTAGAGATGAGCTCCCTCTTAACTTGAGTGGTGATGCCTCCCATGGACACAATC
. : . : . : . : . : . :
JMFN029P15+ TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
JMFN036G04+ TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
JMFN007A02+ TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
JMFN013B13+ TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
JMFN004J04+ TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
rJMSF029P06- TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
JMFN043M19+ TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
JMFN046C14+ TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
JMFN045E13+ TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
rJMSF025L21- TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
JMSF025L21+ TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
JMFN028F08+ TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
____________________________________________________________
consensus TCTGCCAGAGCTGCTGCCTCTTTGCTGCCTCCAAAGGTTATGTTTGCAGATCCTTTCAGG
. : . : . : . : . : . :
JMFN029P15+ ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
JMFN036G04+ ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
JMFN007A02+ ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
JMFN013B13+ ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
JMFN004J04+ ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
rJMSF029P06- ATGATCATCACAAACTGT
JMFN043M19+ ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
JMFN046C14+ ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
JMFN045E13+ ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
rJMSF025L21- ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
JMSF025L21+ ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
JMFN028F08+ ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
____________________________________________________________
consensus ATGATCATCACAAACTGTTCGGGTTTTCCGATGATGGTGGCGACGGCGGTGGTGGCTTCC
. : . : . : . : . : . :
JMFN029P15+ CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
JMFN036G04+ CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
JMFN007A02+ CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
JMFN013B13+ CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
JMFN004J04+ CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
JMFN043M19+ CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
JMFN046C14+ CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
JMFN045E13+ CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
rJMSF025L21- CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
JMSF025L21+ CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
JMFN028F08+ CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
____________________________________________________________
consensus CGGGAAAAGGATTCCACGTCTACGTCTTCAAGCTTCACATTGGTTGATATATCTAAGCAA
. : . : . : . : . : . :
JMFN029P15+ GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
JMFN036G04+ GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
JMFN007A02+ GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
JMFN013B13+ GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
JMFN004J04+ GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
JMFN043M19+ GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
JMFN046C14+ GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
JMFN045E13+ GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
rJMSF025L21- GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
JMSF025L21+ GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
JMFN028F08+ GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
____________________________________________________________
consensus GGCATCTTTTTACTTTTTCTTAAATATATATATGTATATATATATAATGTCACTGTATAT
. : . : . : . : . : . :
JMFN029P15+ ATATATGATGAAGGGAGTTGAATTGATA
JMFN036G04+ ATATATGATGAAGGGAGTTGAATTGAT
JMFN007A02+ ATATATGATGAAGGGAGTTGAATTGA
JMFN013B13+ ATATATGATGAAGGGAGTTGAAT
JMFN004J04+ ATATATGATGAAGGGAG
JMFN043M19+ ATATATGATGAAGGGAGTTGAATTGATAGATCGA
JMFN046C14+ ATATATGATGAAGGGAGTTGAATTGATAGATCGATC
JMFN045E13+ ATATATGATGAA
rJMSF025L21- ATATATGATGAAGGGAGTTGAATTGATAGATCGATCGAGCTTAATTGT
JMSF025L21+ ATATATGATGAAGGGAGTTGAATTGATAGATCGATCGAGCTTAATTGT
JMFN028F08+ ATATATGATGAAGGGAGTTGAATTGATAGATCGATCGAGCTTAATTGTTACGATGCATGC
____________________________________________________________
consensus ATATATGATGAAGGGAGTTGAATTGATAGATCGATCGAGCTTAATTGTTACGATGCATGC