Contig 011698:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN018I20Sequence521011698 (5)gb|EYU23030.1|8e-24hypothetical protein MIMGU_mgv1a002522mg [Erythranthe guttata]
JMSF007N02Sequence382000639 (5)ref|XP_009767272.1|7e-31PREDICTED: probable inactive receptor kinase At2g26730 [Nicotiana sylvestris]744011698 (5)ref|XP_009614171.1|3e-122PREDICTED: probable inactive receptor kinase At2g26730 [Nicotiana tomentosiform
JMSF010D08Sequence247000639 (5)692011698 (5)ref|XP_009614171.1|1e-127PREDICTED: probable inactive receptor kinase At2g26730 [Nicotiana tomentosiform
JMSF013K22Sequence236000639 (5)ref|XP_011084098.1|9e-09PREDICTED: probable inactive receptor kinase At2g26730 [Sesamum indicum]767011698 (5)ref|XP_009614171.1|2e-126PREDICTED: probable inactive receptor kinase At2g26730 [Nicotiana tomentosiform
JMSF051A13Sequence656000639 (5)ref|XP_009371417.1|8e-43PREDICTED: probable inactive receptor kinase At2g26730 [Pyrus x bretschneideri]750011698 (5)ref|XP_009614171.1|1e-114PREDICTED: probable inactive receptor kinase At2g26730 [Nicotiana tomentosiform

Alignment

This contig is upended


                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+                                             TCATTGTAGTAGAGGGTCTGGGCGA
rJMSF051A13+                                                    AGTAGAGGGTCTGGGCGA
rJMSF013K22+                                                    AGTAGAGGGTTTGGGCGA
                      ____________________________________________________________
consensus                                                TCATTGTAGTAGAGGGTCTGGGCGA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          ACGCCACTAGACTGGGATACGAGAATGAAAA-TTGCGTTGTGTGCGGCGAGAGGCCTTGC
rJMSF051A13+          ACGCCACTAGACTGGGATACGAGAATGAAAATTTGCGTTGTGTGCGGCGAGAGGCCTTGC
rJMSF007N02+            GCCACTAGACTGGGATACGAGAATGAAAA-TTGCGTTGTGTGCGGCGAGAGGCCTTGC
rJMSF013K22+          ACGCCACTAGACTGGGATACGAGAATGAAAA-TTGCGTTGTGTGCGGCGAGAGGCCTTGC
                      ____________________________________________________________
consensus             ACGCCACTAGACTGGGATACGAGAATGAAAA-TTGCGTTGTGTGCGGCGAGAGGCCTTGC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          GTATCTTCACGCGGGAGGGAAGGTAGTGCATGGCAACATAAAGGCGTCAAATATCTTGCT
rJMSF051A13+          GTATCTTCACGCGGGAGGGAAGGTAGTGCATGGCAACATAAAGGCGTCAAATATCTTGCT
rJMSF007N02+          GTATCTTCACGCGGGAGGGAAGGTAGTGCATGGCAACATAAAGGCGTCAAATATCTTGCT
rJMSF013K22+          GTATCTTCACGCGGGAGGGAAGGTAGTGCATGGCAACATAAAGGCGTCAAATATCTTGCT
                      ____________________________________________________________
consensus             GTATCTTCACGCGGGAGGGAAGGTAGTGCATGGCAACATAAAGGCGTCAAATATCTTGCT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          CAAGCAGGACAATCACGAGGCCTGTCTAGCGGATTATGGATTGAACCCGTTGTTTTCCAG
rJMSF051A13+          CAAGCAGGACAATCACGAGGCCTGTCTAGCGGATTATGGATTGAACCCGTTGTTTTCCAG
rJMSF007N02+          CAAGCAGGACAATCACGAGGCCTGTCTAGCGGATTATGGATTGAACCCGTTGTTTTCCAG
rJMSF013K22+          CAAGCAGGACAATCACGAGGCCTGTCTAGCGGATTATGGATTGAACCCGTTGTTTTCCAG
                      ____________________________________________________________
consensus             CAAGCAGGACAATCACGAGGCCTGTCTAGCGGATTATGGATTGAACCCGTTGTTTTCCAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          CTCGACGCCGGTCAACCACAGGGTCGCAGGGTATCGGGCCCCAGAGGTGCTCGAGACCCG
rJMSF051A13+          CTCGACGCCGGTCAACCACAGGGTCGCAGGGTATCGGGCCCCAGAGGTGCTCGAGACCCG
rJMSF007N02+          CTCGACGCCGGTCAACCACAGGGTCGCAGGGTATCGGGCCCCAGAGGTGCTCGAGACCCG
rJMSF013K22+          CTCGACGCCGGTCAACCACAGGGTCGCAGGGTATCGGGCCCCAGAGGTGCTCGAGACCCG
                      ____________________________________________________________
consensus             CTCGACGCCGGTCAACCACAGGGTCGCAGGGTATCGGGCCCCAGAGGTGCTCGAGACCCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          AAAGGTCACGTTTAAGTCAGATGTGTACAGCTACGGGGTTTTGTTGTTGGAGCTTCTAAC
rJMSF051A13+          AAAGGTCACGTTTAAGTCAGATGTGTACAGCTACGGGGTTTTGTTGTTGGAGCTTCTAAC
rJMSF007N02+          AAAGGTCACGTTTAAGTCAGATGTGTACAGCTACGGGGTTTTGTTGTTGGAGCTTCTAAC
rJMSF013K22+          AAAGGTCACGTTTAAGTCAGATGTGTACAGCTACGGGGTTTTGTTGTTGGAGCTTCTAAC
                      ____________________________________________________________
consensus             AAAGGTCACGTTTAAGTCAGATGTGTACAGCTACGGGGTTTTGTTGTTGGAGCTTCTAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          GGGCAAATCGCCCAACCAGGCTTCGTTAGGCGAGGAGGGCATTGATTTGCCCCGATGGGT
rJMSF051A13+          GGGCAAATCGCCCAACCAGGCTTCGTTAGGCGAGGAGGGCATTGATTTGCCCCGATGGGT
rJMSF007N02+          GGGCAAATCGCCCAACCAGGCTTCGTTAGGCGAGGAGGGCATTGATTTGCCCCGATGGGT
rJMSF013K22+          GGGCAAATCGCCCAACCAGGCTTCGTTAGGCGAGGAGGGCATTGATTTGCCCCGATGGGT
                      ____________________________________________________________
consensus             GGGCAAATCGCCCAACCAGGCTTCGTTAGGCGAGGAGGGCATTGATTTGCCCCGATGGGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          TCAAAGCGTCGTTAGGGAGGAATGGACCGCCGAAGTGTTTGATGTCGAGNTAATGAGGTA
rJMSF051A13+          TCAAAGCGTCGTTAGGGAGGAATGGACCGCCGAAGTGTTTGATGTCGAGCTAATGAGGTA
rJMSF007N02+          TCAAAGCGTCGTTAGGGAGGAATGGACCGCCGAAGTGTTTGATGTCGAGCTAATGAGGTA
rJMSF013K22+          TCAAAGCGTCGTTAGGGAGGAATGGACCGCCGAAGTGTTTGATGTCGAGCTAATGAGGTA
                      ____________________________________________________________
consensus             TCAAAGCGTCGTTAGGGAGGAATGGACCGCCGAAGTGTTTGATGTCGAGCTAATGAGGTA
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          TCACAATGTGGAAGAAGAGATGGTGCAACTACTCCAGATTGGAATGGCATGTGTTGCCAT
rJMSF051A13+          TCACAATGTGGAAGAAGAGATGGTGCAACTACTCCAGATTGGAATGGCATGTGTTGCCAT
rJMSF007N02+          TCACAATGTGGAAGAAGAGATGGTGCAACTACTCCAGATTGGAATGGCATGTGTTGCCAT
rJMSF013K22+          TCACAATGTGGAAGAAGAGATGGTGCAACTACTCCAGATTGGAATGGCATGTGTTGCCAT
JMFN018I20+                             GATGGTGCAACTACTCCAGATTGGAATGGCATGTGTTGCCAT
                      ____________________________________________________________
consensus             TCACAATGTGGAAGAAGAGATGGTGCAACTACTCCAGATTGGAATGGCATGTGTTGCCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          GGTTCCCGACCAGAGACCCTNGATGCCGGATGTGGTGAGGATGATGGAGGAGATAAACCG
rJMSF051A13+          GGTTCCCGACCAGAGACCCTCGATGCCGGATGTGGTGAGGATGATGGAGGAGATAAACCG
rJMSF007N02+          GGTTCCCGACCAGAGACCCTCGATGCCGGATGTGGTGAGGATGATGGAGGAGATAAACCG
rJMSF013K22+          GGTTCCCGACCAGAGACCCTCGATGCCGGATGTGGTGAGGATGATGGAGGAGATAAACCG
JMFN018I20+           GGTTCCCGACCAGAGACCCTCGATGCCGGATGTGGTGAGGATGATGGAGGAGATAAACCG
                      ____________________________________________________________
consensus             GGTTCCCGACCAGAGACCCTCGATGCCGGATGTGGTGAGGATGATGGAGGAGATAAACCG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          CGGGGGCGAAACGGACGATGGATTGCGACGACAATCCTCCGATGATCCATCGAAAGGGTC
rJMSF051A13+          CGGGGGCGAAACGGACGATGGATTGCGACGACAATCCTCCGATGATCCATCGAAAGGGTC
rJMSF007N02+          CGGGGGCGAAACGGACGATGGATTGCGACGACAATCCTCCGATGATCCATCGAAAGGGTC
rJMSF013K22+          CGGGGGCGAAACGGACGATGGATTGCGACGACAATCCTCCGATGATCCATCGAAAGGGTC
JMFN018I20+           CGGGGGCGAAACGGACGATGGATTGCGACGACAATCCTCCGATGATCCATCGAAAGGGTC
                      ____________________________________________________________
consensus             CGGGGGCGAAACGGACGATGGATTGCGACGACAATCCTCCGATGATCCATCGAAAGGGTC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          CGACATCCAAACACCTCCTCAGGAACCCCGAGCTTCACCTCCATAGGATCAAAGCAAAAC
rJMSF051A13+          CGACATCCAAACACCTCCTCAGGAACCCCGAGCTTCACCTCCATAGGATCAAAGCAAAAC
rJMSF007N02+          CGACATCCAAACACCTCCTCAGGAACCCCGAGCTTCACCTCCATAGGATCAAAGCAAAAC
rJMSF013K22+          CGACATCCAAACACCTCCTCAGGAACCCCGAGCTTCACCTCCATAGGATCAAAGCAAAAC
JMFN018I20+           CGACATCCAAACACCTCCTCAGGAACCCCGAGCTTCACCTCCATAGGATCAAAGCAAAAC
                      ____________________________________________________________
consensus             CGACATCCAAACACCTCCTCAGGAACCCCGAGCTTCACCTCCATAGGATCAAAGCAAAAC
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF010D08+          AACATAAG                                                    
rJMSF051A13+          AACATAAGCTATTGTTGAAATCTGCTGGAAGGCTATTCAGTCAAGTATATTACTTCCATT
rJMSF007N02+          AACATAAGCTATTGTTGAAATCTGCTGGAAGGCTATTCAGTCAAGTATATTACTTCCA-T
rJMSF013K22+          AACATAAGCTATTGTTGAAATCTGCTGGAAGGCTATTCAGTCAAGTATATTACTTCCATT
JMFN018I20+           AACATAAGCTATTGTTGAAATTTGCTGGAAGGCTATTCAGTCAAGTATATTACTTCCA-T
                      ____________________________________________________________
consensus             AACATAAGCTATTGTTGAAATCTGCTGGAAGGCTATTCAGTCAAGTATATTACTTCCATT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
rJMSF051A13+          TTTTT                                                       
rJMSF007N02+          TTTTTTGTTTTCCTTTTTTCAAGAAAAT                                
rJMSF013K22+          TTTTTTGTTTTCCTTTTTTCAAGAAAAT                                
JMFN018I20+           TTTTTTGTTTTCCTTTTTTCAAGAAAATTGTGCAGTGAAATTGATAGAGATAATGGTAGT
                      ____________________________________________________________
consensus             TTTTTTGTTTTCCTTTTTTCAAGAAAATTGTGCAGTGAAATTGATAGAGATAATGGTAGT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018I20+           TTGCAGGAGGAAAAAAAAAAAAAAAAGAGTGTTGAATATGAAGTGATTGGAGTTGACCAT
                      ____________________________________________________________
consensus             TTGCAGGAGGAAAAAAAAAAAAAAAAGAGTGTTGAATATGAAGTGATTGGAGTTGACCAT
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018I20+           TTGATGTATTCAGTTGTTCCTTTTATCATCTGATTCTTTTTGTTCAAAAACTTTATTAAG
                      ____________________________________________________________
consensus             TTGATGTATTCAGTTGTTCCTTTTATCATCTGATTCTTTTTGTTCAAAAACTTTATTAAG
 
                          .    :    .    :    .    :    .    :    .    :    .    :
JMFN018I20+           AATATATGCTTCTTTGCATTTGGCCTXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
                      ____________________________________________________________
consensus             AATATATGCTTCTTTGCATTTGGCCTNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC