| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF008B02 | Sequence | 552 | 011697 (5) | ref|XP_009589195.1| | 5e-24 | PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-like [ | 556 | 011697 (5) | ref|XP_009589195.1| | 6e-24 | PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-like [ |
| JMFF039O01 | Sequence | 551 | 011697 (5) | ref|XP_009589195.1| | 4e-21 | PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-like [ | 515 | 011697 (5) | ref|XP_009589195.1| | 3e-21 | PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-like [ |
| JMFN017O09 | Sequence | 557 | 011697 (5) | ref|XP_009589195.1| | 4e-21 | PREDICTED: mitochondrial import inner membrane translocase subunit Tim13-like [ | |||||
This contig is upended
. : . : . : . : . : . :
rJMFF008B02- CTTTGTATTTTGATTGATTATTTGAATA
JMFF039O01+ TTATTTGAATA
JMFF008B02+ TTATTTGAATA
JMFN017O09+ TTATTTGAATA
____________________________________________________________
consensus CTTTGTATTTTGATTGATTATTTGAATA
. : . : . : . : . : . :
rJMFF008B02- ATAATAATAATCATAATATTGTCGAATTATCTGACAAAGGTAGAGTTCAGAGAACTGCAT
JMFF039O01+ ATAATAATAATCATAATATTGTCGAATTATCTGACAAAGGTAGAGTTCAGAGAACTGCAT
JMFF008B02+ ATAATAATAATCATAATATTGTCGAATTATCTGACAAAGGTAGAGTTCAGAGAACTGCAT
rJMFF039O01- TAATATTGTCGAATTATCTGACAAAGGTAGAGTTCAGAGAACTGCAT
JMFN017O09+ ATAATAATAATCATAATATTGTCGAATTATCTGACAAAGGTAGAGTTCAGAGAACTGCAT
____________________________________________________________
consensus ATAATAATAATCATAATATTGTCGAATTATCTGACAAAGGTAGAGTTCAGAGAACTGCAT
. : . : . : . : . : . :
rJMFF008B02- AATATCCTCAAATTGAACAATATTCAAAATGGTGAAACATAGCAAAATACATCAGGGATC
JMFF039O01+ AATATCCTCAAATTGAACAATATTCAAAATGGTGAAACATAGCAAAATACATCAGGGATC
JMFF008B02+ AATATCCTCAAATTGAACAATATTCAAAATGGTGAAACATAGCAAAATACATCAGGGATC
rJMFF039O01- AATATCCTCAAATTGAACAATATTCAAAATGGTGAAACATAGCAAAATACATCAGGGATC
JMFN017O09+ AATATCCTCAAATTGAACAATATTCAAAATGGTGAAACATAGCAAAATACATCAGGGATC
____________________________________________________________
consensus AATATCCTCAAATTGAACAATATTCAAAATGGTGAAACATAGCAAAATACATCAGGGATC
. : . : . : . : . : . :
rJMFF008B02- ATCTACGAGAAAAATGTTCTCTAAACCAAGTTATCAACCGTATCGTTGGAATGTAATTAA
JMFF039O01+ ATCTACGAGAAAAATGTTCTCTAAACCAAGTTATCAACCGTATCGTTGGAATGTAATTAA
JMFF008B02+ ATCTACGAGAAAAATGTTCTCTAAACCAAGTTATCAACCGTATCGTTGGAATGTAATTAA
rJMFF039O01- ATCTACGAGAAAAATGTTCTCTAAACCAAGTTATCAACCGTATCGTTGGAATGTAATTAA
JMFN017O09+ ATCTACGAGAAAAATGTTCTCTAAACCAAGTTATCAACCGTATCGTTGGAATGTAATTAA
____________________________________________________________
consensus ATCTACGAGAAAAATGTTCTCTAAACCAAGTTATCAACCGTATCGTTGGAATGTAATTAA
. : . : . : . : . : . :
rJMFF008B02- TCATAATCAGGCAGCAGTTTTCATCGTGGCTGGCTGAAGAGAGCTTTGCTGATGATACCG
JMFF039O01+ TCATAATCAGGCAGCAGTTTTCATCGTGGCTGGCTGAAGAGAGCTTTGCTGATGATACCG
JMFF008B02+ TCATAATCAGGCAGCAGTTTTCATCGTGGCTGGCTGAAGAGAGCTTTGCTGATGATACCG
rJMFF039O01- TCATAATCAGGCAGCAGTTTTCATCGTGGCTGGCTGAAGAGAGCTTTGCTGATGATACCG
JMFN017O09+ TCATAATCAGGCAGCAGTTTTCATCGTGGCTGGCTGAAGAGAGCTTTGCTGATGATACCG
____________________________________________________________
consensus TCATAATCAGGCAGCAGTTTTCATCGTGGCTGGCTGAAGAGAGCTTTGCTGATGATACCG
. : . : . : . : . : . :
rJMFF008B02- GTGGCTTCAATATATCGATCAACGCACCTGGAGATGCAACTGCTCTAGCCCCCACTCAAG
JMFF039O01+ GTGGCTTCAATATATCGATCAACGCACCTGGAGATGCAACTGCTCTCGCCCCCACTCAAG
JMFF008B02+ GTGGCTTCAATATATCGATCAACGCACCTGGAGATGCAACTGCTCTAGCCCCCACTCAAG
rJMFF039O01- GTGGCTTCAATATATCGATCAACGCACCTGGAGATGCAACTGCTCTCGCCCCCACTCAAG
JMFN017O09+ GTGGCTTCAATATATCGATCAACGCACCTGGAGATGCAACTGCTCTCGCCCCCACTCAAG
____________________________________________________________
consensus GTGGCTTCAATATATCGATCAACGCACCTGGAGATGCAACTGCTCTCGCCCCCACTCAAG
. : . : . : . : . : . :
rJMFF008B02- CTACTCCCAGGCTTGGTGATGCACTTGTCAAAGCATTTCTCTCTCACAGTCTCAATGAAC
JMFF039O01+ CTACTCCCAGGCTTGGTGATGCACTTGTCAAAGCATTTCTCTCTCACAGTCTCAATGAAC
JMFF008B02+ CTACTCCCAGGCTTGGTGATGCACTTGTCAAAGCATTTCTCTCTCACAGTCTCAATGAAC
rJMFF039O01- CTACTCCCAGGCTTGGTGATGCACTTGTCAAAGCATTTCTCTCTCACAGTCTCAATGAAC
JMFN017O09+ CTACTCCCAGGCTTGGTGATGCACTTGTCAAAGCATTTCTCTCTCACAGTCTCAATGAAC
____________________________________________________________
consensus CTACTCCCAGGCTTGGTGATGCACTTGTCAAAGCATTTCTCTCTCACAGTCTCAATGAAC
. : . : . : . : . : . :
rJMFF008B02- TGCTCAAAATAAGCTTGGGCGAGCTGATTTTTGAGCTGGTCCATGACATCATCCGACGGC
JMFF039O01+ TGCTCAAAATAAGCTTGGGCGAGCTGATTTTTGAGCTGGTCCATGACATCATCCGACGGC
JMFF008B02+ TGCTCAAAATAAGCTTGGGCGAGCTGATTTTTGAGCTGGTCCATGACATCATCCGACGGC
rJMFF039O01- TGCTCAAAATAAGCTTGGGCGAGCTGATTTTTGAGCTGGTCCATGACATCATCCGACGGC
JMFN017O09+ TGCTCAAAATAAGCTTGGGCGAGCTGATTTTTGAGCTGGTCCATGACATCATCCGACGGC
____________________________________________________________
consensus TGCTCAAAATAAGCTTGGGCGAGCTGATTTTTGAGCTGGTCCATGACATCATCCGACGGC
. : . : . : . : . : . :
rJMFF008B02- GACCCGCTTGACGGCGACGAGAATGAATCCATACTTCTTCAGTTCTTCCCGATTGGATTG
JMFF039O01+ GACCCGCTTGACGGCGACGAGAATGAATCCATACTTCTTCAGTTCTTCCCGATTGGATTG
JMFF008B02+ GACCCGCTTGACGGCGACGAGAATGAATCCATACTTCTTCAGTTCTTCCCGATTGGATTG
rJMFF039O01- GACCCGCTTGACGGCGACGAGAATGAATCCATACTTCTTCAGTTCTTCCCGATTGGATTG
JMFN017O09+ GACCCGCTTGACGGCGACGAGAATGAATCCATACTTCTTCAGTTCTTCCCGATTGGATTG
____________________________________________________________
consensus GACCCGCTTGACGGCGACGAGAATGAATCCATACTTCTTCAGTTCTTCCCGATTGGATTG
. : . : . : . : . : . :
rJMFF008B02- ATCTCTTGCCCGACTGCCGATAATGAGAAACCCTAGAGAGATAGC
JMFF039O01+ ATCTCTTGCCCGACTGCCGATAATGAGAAACCCTAGAGAGATAGC
JMFF008B02+ ATCTCTTGCCCGACTGCCGATAATGAGAAACCCTAGAGAGATAGC
rJMFF039O01- ATCTCTTGCCCGACTGCCGATAATGAGAAACCCTAGAGAGATAGC
JMFN017O09+ ATCTCTTGCCCGACTGCCGATAATGAGAAACCCTAGAGAGATAGCCCCGGTTGCTAAAAC
____________________________________________________________
consensus ATCTCTTGCCCGACTGCCGATAATGAGAAACCCTAGAGAGATAGCCCCGGTTGCTAAAAC