Contig 011696:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN017J02Sequence568011696 (2)ref|XP_004235185.1|2e-38PREDICTED: ethylene-responsive transcription factor 5-like [Solanum lycopersicu
JMFN039C17Sequence569011696 (2)gb|AAX20037.1|4e-45ethylene responsive element binding protein C4 [Capsicum annuum]

Alignment

This contig is upended


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JMFN039C17+                      AGGGCTTCGATTCACCACAGACTCTGGCTTCCATAGTCAGGTGCAGGAT
                      ____________________________________________________________
consensus                        AGGGCTTCGATTCACCACAGACTCTGGCTTCCATAGTCAGGTGCAGGAT
 
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JMFN039C17+           CTTCGTATTCCTCAAACAAAATATTTTATGGATTTCCTTAAACCCTAATTCCATGATAGT
                      ____________________________________________________________
consensus             CTTCGTATTCCTCAAACAAAATATTTTATGGATTTCCTTAAACCCTAATTCCATGATAGT
 
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JMFN039C17+           TATATACGTTTGGTGATAACGGCGGGATTTCGAAGATACCCTTCGCTTCAGAACAGTCCC
                      ____________________________________________________________
consensus             TATATACGTTTGGTGATAACGGCGGGATTTCGAAGATACCCTTCGCTTCAGAACAGTCCC
 
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JMFN039C17+           ATACCGTCATCCAACTTGACGGCGTTAAGGGAGCCGCCGCCGCCGCCGCCGCAGGCGGCG
                      ____________________________________________________________
consensus             ATACCGTCATCCAACTTGACGGCGTTAAGGGAGCCGCCGCCGCCGCCGCCGCAGGCGGCG
 
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JMFN039C17+           GCTGCGGCGCTTCAGATGACTCTTCCACCACTTCCCTTTTCACCTGCTTAATCACCGCCA
                      ____________________________________________________________
consensus             GCTGCGGCGCTTCAGATGACTCTTCCACCACTTCCCTTTTCACCTGCTTAATCACCGCCA
 
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JMFN039C17+           CTTCCTCCTCGGCTTCTCTGGGCCTTTTCTGGCCGAAAGTCGGCGGCGGCTGGGGCTGGC
JMFN017J02+                                           CCGAAAGTCGGCGGCGGCTGGGGCTGGC
                      ____________________________________________________________
consensus             CTTCCTCCTCGGCTTCTCTGGGCCTTTTCTGGCCGAAAGTCGGCGGCGGCTGGGGCTGGC
 
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JMFN039C17+           TCTCTGGCCGGAAGTTCTCGACTTCGAGCGGGAAGTTGAGAATGGCTTTGCTGCCTCTCA
JMFN017J02+           TCTCTGGCCGGAAGTTCTCGACTTCGAGCGGGAAGTTGAGAATGGCTTTGCTGCCTCTCA
                      ____________________________________________________________
consensus             TCTCTGGCCGGAAGTTCTCGACTTCGAGCGGGAAGTTGAGAATGGCTTTGCTGCCTCTCA
 
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JMFN039C17+           GCTTAAACGCCGCCCGATCATAGGCCTTTGCGGCGTCCACGGCGGTGTCGAAGGTCCCGA
JMFN017J02+           GCTTAAACGCCGCCCGATCATAGGCCTTTGCGGCGTCCACGGCGGTGTCGAAGGTCCCGA
                      ____________________________________________________________
consensus             GCTTAAACGCCGCCCGATCATAGGCCTTTGCGGCGTCCACGGCGGTGTCGAAGGTCCCGA
 
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JMFN039C17+           GCCAAACCCGGGTCCCCTTCCGGTTCGGGTCGCGGATCTCCGCGGCGAATTTCCCCCACG
JMFN017J02+           GCCAAACCCGGGTCCCCTTCCGGTTCGGGTCGCGGATCTCCGCGGCGAATTTCCCCCACG
                      ____________________________________________________________
consensus             GCCAAACCCGGGTCCCCTTCCGGTTCGGGTCGCGGATCTCCGCGGCGAATTTCCCCCACG
 
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JMFN039C17+           GTCGCTGCCTCACGCCCCTGTAGTGCCTCTTAACAACCTC                    
JMFN017J02+           GTCGCTGCCTCACGCCCCTGTAGTGCCTCTTAACAACCTCGCCGGAATCTTGAATTTCCG
                      ____________________________________________________________
consensus             GTCGCTGCCTCACGCCCCTGTAGTGCCTCTTAACAACCTCGCCGGAATCTTGAATTTCCG
 
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JMFN017J02+           GCGGCGGCGGCATCTGCCCAGCCCCCTTATTGTTCACCGCCGCCGGCCTGGGAATCGCGA
                      ____________________________________________________________
consensus             GCGGCGGCGGCATCTGCCCAGCCCCCTTATTGTTCACCGCCGCCGGCCTGGGAATCGCGA
 
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JMFN017J02+           TATTCAAACTGGGTTTCCTCTCATTAAACTTGCTAGACGGACTAGAAGCCACAACCTGCG
                      ____________________________________________________________
consensus             TATTCAAACTGGGTTTCCTCTCATTAAACTTGCTAGACGGACTAGAAGCCACAACCTGCG
 
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JMFN017J02+           GGTTAAAGCAATTCTGCTCAGAATTGCAGTAAAGTTGATTAAAAGCAGGATCATCAAGAA
                      ____________________________________________________________
consensus             GGTTAAAGCAATTCTGCTCAGAATTGCAGTAAAGTTGATTAAAAGCAGGATCATCAAGAA
 
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JMFN017J02+           GGAGATGTCTAATCTGTTCAAGGGTACAATTTTCCCCAGATAAAGCCATCTTAATTTACT
                      ____________________________________________________________
consensus             GGAGATGTCTAATCTGTTCAAGGGTACAATTTTCCCCAGATAAAGCCATCTTAATTTACT
 
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JMFN017J02+           GTTTTTTTCTGTCTTTTTTCTTTTGTGACTAAGAAGCTATGGAGATTGGAGAGATAAGAA
                      ____________________________________________________________
consensus             GTTTTTTTCTGTCTTTTTTCTTTTGTGACTAAGAAGCTATGGAGATTGGAGAGATAAGAA