Contig 011690:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN014L04Sequence621011690 (3)ref|XP_011093601.1|81.3PREDICTED: uncharacterized protein LOC105173526 [Sesamum indicum]
JMFN014M23Sequence565011690 (3)ref|XP_011093601.1|81.3PREDICTED: uncharacterized protein LOC105173526 [Sesamum indicum]
JMFN016J17Sequence533011690 (3)ref|XP_011093601.1|76.6PREDICTED: uncharacterized protein LOC105173526 [Sesamum indicum]

Alignment

This contig is upended


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JMFN016J17+                                              GAAGCAGCAAATGATGAGGTATATG
JMFN014M23+                                                          GATGAGGTATATG
JMFN014L04+                                                         TGATGAGGTATATG
                      ____________________________________________________________
consensus                                                GAAGCAGCAAATGATGAGGTATATG
 
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JMFN016J17+           TAACACAGCATTACTCACCAAAATTCAGCCTTTGTGAGTATGAAACAATCAACCTCTTGG
JMFN014M23+           TAACACAGCATTACTCACCAAAATTCAGCCTTTGTGAGTATGAAACAATCAACCTCTTGG
JMFN014L04+           TAACACAGCATTACTCACCAAAATTCAGCCTTTGTGAGTATGAAACAATCAACCTCTTGG
                      ____________________________________________________________
consensus             TAACACAGCATTACTCACCAAAATTCAGCCTTTGTGAGTATGAAACAATCAACCTCTTGG
 
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JMFN016J17+           ACAGAGCAAAATACAGATTAGTATACAACTCAGCAAACCAAAATGGTTGCCAGGAACTGG
JMFN014M23+           ACAGAGCAAAATACAGATTAGTATACAACTCAGCAAACCAAAATGGTTGCCAGGAACTGG
JMFN014L04+           ACAGAGCAAAATACAGATTAGTATACAACTCAGCAAACCAAAATGGTTGCCAGGAACTGG
                      ____________________________________________________________
consensus             ACAGAGCAAAATACAGATTAGTATACAACTCAGCAAACCAAAATGGTTGCCAGGAACTGG
 
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JMFN016J17+           GAAATCAGTCACTAATAATGTAGGAAAAAGTTATTAAGGTGACCACAGAAATGTTTTTGG
JMFN014M23+           GAAATCAGTCACTAATAATGTAGGAAAAAGTTATTAAGGTGACCACAGAAATGTTTTTGG
JMFN014L04+           GAAATCAGTCACTAATAATGTAGGAAAAAGTTATTAAGGTGACCACAGAAATGTTTTTGG
                      ____________________________________________________________
consensus             GAAATCAGTCACTAATAATGTAGGAAAAAGTTATTAAGGTGACCACAGAAATGTTTTTGG
 
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JMFN016J17+           TCTAAATTCAGATATCGAGTCTGTCGCCTACATCCCTTCAGAGAAATAAACTGCTTGCCT
JMFN014M23+           TCTAAATTCAGATATCGAGTCTGTCGCCTACATCCCTTCAGAGAAATAAACTGCTTGCCT
JMFN014L04+           TCTAAATTCAGATATCGAGTCTGTCGCCTACATCCCTTCAGAGAAATAAACTGCTTGCCT
                      ____________________________________________________________
consensus             TCTAAATTCAGATATCGAGTCTGTCGCCTACATCCCTTCAGAGAAATAAACTGCTTGCCT
 
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JMFN016J17+           AGTGAGGACTTGACTCAAAAGGTGCCTATCATAAAGGCAGTGAATTCCCTTGAGGAACTA
JMFN014M23+           AGTGAGGACTTGACTCAAAAGGTGCCTATCATAAAGGCAGTGAATTCCCTTGAGGAACTA
JMFN014L04+           AGTGAGGACTTGACTCAAAAGGTGCCTATCATAAAGGCAGTGAATTCCCTTGAGGAACTA
                      ____________________________________________________________
consensus             AGTGAGGACTTGACTCAAAAGGTGCCTATCATAAAGGCAGTGAATTCCCTTGAGGAACTA
 
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JMFN016J17+           AACTCCAGCTATGCGATTCAATGGACAAGCTGGACTTCAGTCGAGCTGAAGCTATGGCAC
JMFN014M23+           AACTCCAGCTATGCGATTCAATGGACAAGCTGGACTTCAGTCGAGCTGAAGCTATGGCAC
JMFN014L04+           AACTCCAGCTATGCGATTCAATGGACAAGCTGGACTTCAGTCGAGCTGAAGCTATGGCAC
                      ____________________________________________________________
consensus             AACTCCAGCTATGCGATTCAATGGACAAGCTGGACTTCAGTCGAGCTGAAGCTATGGCAC
 
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JMFN016J17+           TGTACAGTGGCATCATCGTCTCCACACCACTCAATTCCACGGGTAACCTGGAGATTCGGG
JMFN014M23+           TGTACAGTGGCATCATCGTCTCCACACCACTCAATTCCACGGGTAACCTGGAGATTCGGG
JMFN014L04+           TGTACAGTGGCATCATCGTCTCCACACCACTCAATTCCACGGGTAACCTGGAGATTCGGG
                      ____________________________________________________________
consensus             TGTACAGTGGCATCATCGTCTCCACACCACTCAATTCCACGGGTAACCTGGAGATTCGGG
 
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JMFN016J17+           AGAAGCGTTTGACAGATGATTGGGAGGCTGACTTGAGGAACGATGTATCATGCGACAGAG
JMFN014M23+           AGAAGCGTTTGACAGATGATTGGGAGGCTGACTTGAGGAACGATGTATCATGCGACAGAG
JMFN014L04+           AGAAGCGTTTGACAGATGATTGGGAGGCTGACTTGAGGAACGATGTATCATGCGACAGAG
                      ____________________________________________________________
consensus             AGAAGCGTTTGACAGATGATTGGGAGGCTGACTTGAGGAACGATGTATCATGCGACAGAG
 
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JMFN016J17+           AAGCCGACTTGTTGATCTTGAGAGCTAC                                
JMFN014M23+           AAGCCGACTTGTTGATCTTGAGAGCTACAGGCTGTAACCGAGAAGATAATCTGGAGAGCA
JMFN014L04+           AAGCCGACTTGTTGATCTTGAGAGCTACAGGCTGTAACCGAGAAGATAATCTGGAGAGCA
                      ____________________________________________________________
consensus             AAGCCGACTTGTTGATCTTGAGAGCTACAGGCTGTAACCGAGAAGATAATCTGGAGAGCA
 
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JMFN014M23+           CTCTCGAGGCCG                                                
JMFN014L04+           CTCTCGAGGCCGCCATTGAAGAAAAGGTTTGGAGGTAGATGCTTGCAGTAAGGGGGCTGA
                      ____________________________________________________________
consensus             CTCTCGAGGCCGCCATTGAAGAAAAGGTTTGGAGGTAGATGCTTGCAGTAAGGGGGCTGA