Contig 011688:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF018G23Sequence451010208 (2)ref|XP_009786561.1|3e-17PREDICTED: serine/threonine-protein kinase SRK2E-like [Nicotiana sylvestris] re728011688 (4)ref|XP_009601198.1|5e-92PREDICTED: serine/threonine-protein kinase SRK2E isoform X1 [Nicotiana tomentos
JMFF039E05Sequence433010208 (2)ref|XP_009786561.1|8e-16PREDICTED: serine/threonine-protein kinase SRK2E-like [Nicotiana sylvestris] re615011688 (4)ref|XP_009601198.1|8e-52PREDICTED: serine/threonine-protein kinase SRK2E isoform X1 [Nicotiana tomentos
JMFN013A12Sequence625011688 (4)gb|KDO49172.1|8e-123hypothetical protein CISIN_1g017936mg [Citrus sinensis]
JMFN016C10Sequence533011688 (4)ref|XP_009601203.1|8e-27PREDICTED: serine/threonine-protein kinase SRK2E isoform X2 [Nicotiana tomentos

Alignment

This contig is upended


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JMFN016C10+                GGAAATGGAGTTTGTTGTACAATTACAAAAGAGAAAGTCAAGTATGGATTATGAA
rJMFF039E05-                                                       AGTATGGATTATGAA
                      ____________________________________________________________
consensus                  GGAAATGGAGTTTGTTGTACAATTACAAAAGAGAAAGTCAAGTATGGATTATGAA
 
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JMFN016C10+           AGCAGTACAGTGATGTTTTATATAAGATGCCACAGAGAGAAAATGAACATTACACGAGAA
rJMFF039E05-          AGCAGTACAGTGATGTTTTATATAAGATGCCACAGAGAGAAAATGAACATTACACGAGAA
rJMFF018G23-                   GTGATGTTTTATATAAGATGCCACAGAGAGAAAATGAACATTACACGAGAA
                      ____________________________________________________________
consensus             AGCAGTACAGTGATGTTTTATATAAGATGCCACAGAGAGAAAATGAACATTACACGAGAA
 
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JMFN016C10+           CAAAAGCATGAAAGAAAACAAGCAGTTGAAAAGGCCATGGGGTGGGGGATGAGTCTGTCC
rJMFF039E05-          CAAAAGCATGAAAGAAAACAAGCAGTTGAAAAGGCCATGGGGTGGGGGATGAGTCTGTCC
rJMFF018G23-          CAAAAGCATGAAAGAAAACAAGCAGTTGAAAAGGCCATGGGGTGGGGGATGAGTCTGTCC
                      ____________________________________________________________
consensus             CAAAAGCATGAAAGAAAACAAGCAGTTGAAAAGGCCATGGGGTGGGGGATGAGTCTGTCC
 
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JMFN016C10+           TGTAATATTCACACCAAAGAGAGACTGGCAATAGATTCAAAGTATAGAGCAGTGCGGGTA
rJMFF039E05-          TGTAATATTCACACCAAAGAGAGACTGGCAATAGATTCAAAGTATAGAGCAGTGCGGGTA
rJMFF018G23-          TGTAATATTCACACCAAAGAGAGACTGGCAATAGATTCAAAGTATAGAGCAGTGCGGGTA
                      ____________________________________________________________
consensus             TGTAATATTCACACCAAAGAGAGACTGGCAATAGATTCAAAGTATAGAGCAGTGCGGGTA
 
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JMFN016C10+           TTGTATGTTGTGTTCACCCAGCTGTCCTGTGCACATCTCACATTGCGTATACTATCTCTC
rJMFF039E05-          TTGTATGTTGTGTTCACCCAGCTGTCCTGTGCACATCTCACATTGCGTATACTATCTCTC
rJMFF018G23-          TTGTATGTTGTGTTCACCCAGCTGTCCTGTGCACATCTCACATTGCGTATACTATCTCTC
                      ____________________________________________________________
consensus             TTGTATGTTGTGTTCACCCAGCTGTCCTGTGCACATCTCACATTGCGTATACTATCTCTC
 
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JMFN016C10+           CACTGCTCTCAATGTCGAGGTCAGGGTCGCTCTCCAAGTCTTCTTCCATGTCATCGTCGA
rJMFF039E05-          CACTGCTCTCAATGTCGAGGTCAGGGTCGCTCTCCAAGTCTTCTTCCATGTCATCGTCGA
rJMFF018G23-          CACTGCTCTCAATGTCGAGGTCAGGGTCGCTCTCCAAGTCTTCTTCCATGTCATCGTCGA
                      ____________________________________________________________
consensus             CACTGCTCTCAATGTCGAGGTCAGGGTCGCTCTCCAAGTCTTCTTCCATGTCATCGTCGA
 
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JMFN016C10+           TGTCTAAGCTTCCGGTAAGATAATTGTTGAGGCTGTTAGTCCCGGCAGCTGGAATGGTGG
rJMFF039E05-          TGTCTAAGCTTCCGGTAAGATAATTGTTGAGGCTGTTAGTCCCGGCAGCTGGAATGGTGG
rJMFF018G23-          TGTCTAAGCTTCCGGTAAGATAATTGTTGAGGCTGTTAGTCCCGGCAGCTGGAATGGTGG
                      ____________________________________________________________
consensus             TGTCTAAGCTTCCGGTAAGATAATTGTTGAGGCTGTTAGTCCCGGCAGCTGGAATGGTGG
 
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JMFN016C10+           CCTCCGCTATTATCTGCATGATTTCATCAATGCTCTGCATCGGTTGATCTGGCTCCTCGA
rJMFF039E05-          CCTCCGCTATTATCTGCATGATTTCATCAATGCTCTGCATCGGTTGATCTGGCTCCTCGA
rJMFF018G23-          CCTCCGCTATTATCTGCATGATTTCATCAATGCTCTGCATCGGTTGATCTGGCTCCTCGA
                      ____________________________________________________________
consensus             CCTCCGCTATTATCTGCATGATTTCATCAATGCTCTGCATCGGTTGATCTGGCTCCTCGA
 
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JMFN016C10+           ACTGGTTATTGGTTGTATTGTCATCCATGAGGTCCGCAGGGAGGTTCTTCAGGAACCA  
rJMFF039E05-          ACTGGTTATTGGTTGTATTGTCATCCATGAGGTCCGCAGGGAGGTTCTTCAGGAACCACT
rJMFF018G23-          ACTGGTTATTGGTTGTATTGTCATCCATGAGGTCCGCAGGGAGGTTCTTCAGGAACCACT
                      ____________________________________________________________
consensus             ACTGGTTATTGGTTGTATTGTCATCCATGAGGTCCGCAGGGAGGTTCTTCAGGAACCACT
 
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rJMFF039E05-          CGTGATTCTTGATTTCAGGAATGGATATCCTCTGTGTAGGATCAGCTACAAAGATCCTTG
rJMFF018G23-          CGTGATTCTTGATTTCAGGAATGGATATCCTCTGTGTAGGATCAGCTACAAAGATCCTTG
JMFN013A12+                                              GTAGGATCAGCTACAAAGATCCTTG
                      ____________________________________________________________
consensus             CGTGATTCTTGATTTCAGGAATGGATATCCTCTGTGTAGGATCAGCTACAAAGATCCTTG
 
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rJMFF039E05-          AGATCAGATGACGGCATTCTGGGGAGATGTGAACATAATC                    
rJMFF018G23-          AGATCAGATGACGGCATTCTGGGGAGATGTGAACATAATCTGGTATTGAGTACTGAACAT
JMFN013A12+           AGATCAGATGACGGCATTCTGGGGAGATGTGAACATAATCTGGTATTGAGTACTGAACAT
                      ____________________________________________________________
consensus             AGATCAGATGACGGCATTCTGGGGAGATGTGAACATAATCTGGTATTGAGTACTGAACAT
 
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rJMFF018G23-          TCAAGATTC--------------GCTGTATTGTCTTCCTGAAGTTTTTCGGCTCATCAGG
JMFN013A12+           TCAAGATTCGCTGCACCAAAAGGGCTGTATTGTCTTCCTGAAGTTTTTCGGCTCATCAGG
                      ____________________________________________________________
consensus             TCAAGATTCGCTGCACCAAAAGGGCTGTATTGTCTTCCTGAAGTTTTTCGGCTCATCAGG
 
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rJMFF018G23-          GTGCTCAAAAGGGTAAGCACCAACTAGCATTACGTACAAGGTGACCCCACAAGACCACAC
JMFN013A12+           GTGCTCAAAAGGGTAAGCACCAACTAGCATTACGTACAAGGTGACCCCACAAGACCACAC
                      ____________________________________________________________
consensus             GTGCTCAAAAGGGTAAGCACCAACTAGCATTACGTACAAGGTGACCCCACAAGACCACAC
 
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rJMFF018G23-          ATCTGCAATCTTGCCATCATATTCTTTCTTC                             
JMFN013A12+           ATCTGCAATCTTGCCATCATATTCTTTCTTCAGCAACACTTCAGGTGCAATGTATGCAGG
                      ____________________________________________________________
consensus             ATCTGCAATCTTGCCATCATATTCTTTCTTCAGCAACACTTCAGGTGCAATGTATGCAGG
 
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JMFN013A12+           AGTTCCAACAGTTGACTTCGGTTGTGAATGCAGCACCGAAGACTTTGAATATCCAAAATC
                      ____________________________________________________________
consensus             AGTTCCAACAGTTGACTTCGGTTGTGAATGCAGCACCGAAGACTTTGAATATCCAAAATC
 
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JMFN013A12+           ACATATCTTTAGACGTGGTGCTGGGCTCCCATCCAGTAATGTGTTTTCCAATTTCAAGTC
                      ____________________________________________________________
consensus             ACATATCTTTAGACGTGGTGCTGGGCTCCCATCCAGTAATGTGTTTTCCAATTTCAAGTC
 
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JMFN013A12+           TCGGTGGCATACTTGCATTGAATGACAATAGCTGACCCCTGATATTAGTTGCTGAAAGAA
                      ____________________________________________________________
consensus             TCGGTGGCATACTTGCATTGAATGACAATAGCTGACCCCTGATATTAGTTGCTGAAAGAA
 
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JMFN013A12+           AAACCGTGCCTCATCCTCGCTGAATCGACCAGCATTGCAAATCCGCTCAAACAGCTCTCC
                      ____________________________________________________________
consensus             AAACCGTGCCTCATCCTCGCTGAATCGACCAGCATTGCAAATCCGCTCAAACAGCTCTCC
 
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JMFN013A12+           ACCAGATGCATATTCCATTACAATAGCCAAATGAGTCGGTGTCAATATGACTTCCTTAAA
                      ____________________________________________________________
consensus             ACCAGATGCATATTCCATTACAATAGCCAAATGAGTCGGTGTCAATATGACTTCCTTAAA
 
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JMFN013A12+           TCTGACAATGTTGGGATGCCTTAATGATCTGTGGTTTATAATTTCTCTCTGCACATTTTC
                      ____________________________________________________________
consensus             TCTGACAATGTTGGGATGCCTTAATGATCTGTGGTTTATAATTTCTCTCTGCACATTTTC