Contig 011683:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMSF026N02-              AACTCATTACACAACTTCCAAATGTTCCATAACATTTAAGGAAACACCAGCTTGCA
                      ____________________________________________________________
consensus                 AACTCATTACACAACTTCCAAATGTTCCATAACATTTAAGGAAACACCAGCTTGCA
 
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rJMSF026N02-          TTTACCATTCATCCTCCTGGCGTACATTGATTAAACTTAAAACTTATTGCATTGAAACGT
JMSF026N02+                                                               TGAAACGT
                      ____________________________________________________________
consensus             TTTACCATTCATCCTCCTGGCGTACATTGATTAAACTTAAAACTTATTGCATTGAAACGT
 
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rJMSF026N02-          ACACACAGAGCAAATGTAAAACTCGAGAAACTACTTATACCAGATAGACACACATCTAAG
JMSF026N02+           ACACACAGAGCAAATGTAAAACTCGAGAAACTACTTATACCAGATAGACACACATCTAAG
                      ____________________________________________________________
consensus             ACACACAGAGCAAATGTAAAACTCGAGAAACTACTTATACCAGATAGACACACATCTAAG
 
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rJMSF026N02-          ATAGATTATGAAATATGTTTAACAATTATTGAAACAGAGTATGTAGTTGAACCACCCTAA
JMSF026N02+           ATAGATTATGAAATATGTTTAACAATTATTGAAACAGAGTATGTAGTTGAACCACCCTAA
                      ____________________________________________________________
consensus             ATAGATTATGAAATATGTTTAACAATTATTGAAACAGAGTATGTAGTTGAACCACCCTAA
 
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rJMSF026N02-          TATGCAAACTGAATTATCGGTTCATTCCTCCTTGAACTCCAGGAGCCGTCATTCCAACTC
JMSF026N02+           TATGCAAACTGAATTATCGGTTCATTCCTCCTTGAACTCCAGGAGCCGTCATTCCAACTC
JMFN010K09+                 AACTGAATTATCGGTTCATTCCTCCTTGAACTCCAGGAGCCGTCATTCCAACTC
                      ____________________________________________________________
consensus             TATGCAAACTGAATTATCGGTTCATTCCTCCTTGAACTCCAGGAGCCGTCATTCCAACTC
 
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rJMSF026N02-          CCATATTTTGTCTCTCCATATTTCCTTCCCATCCAAGTGACATGTTGAATCCACGGTGTT
JMSF026N02+           CCATATTTTGTCTCTCCATATTTCCTTCCCATCCAAGTGACATGTTGAATCCACGGTGTT
JMFN010K09+           CCATATTTTGTCTGTCCATATTTCCTTCCCATCCAAGTGACATGTTGAATCCACGGTGTT
                      ____________________________________________________________
consensus             CCATATTTTGTCTCTCCATATTTCCTTCCCATCCAAGTGACATGTTGAATCCACGGTGTT
 
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rJMSF026N02-          TGAGTTCACGGTACTCTTGGCACAGAGCGCAGCTTCCACAGCAACAATGAACAAGGCAAT
JMSF026N02+           TGAGTTCACGGTACTCTTGGCACAGAGCGCAGCTTCCACAGCAACAATGAACAAGGCAAT
JMFN010K09+           TGAGTTCACGGTACTCTTGGCACAGAGCGCAGGATTCACAACAACAATGAACAAGGCAAT
                      ____________________________________________________________
consensus             TGAGTTCACGGTACTCTTGGCACAGAGCGCAGCTTCCACAGCAACAATGAACAAGGCAAT
 
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rJMSF026N02-          CTCCGCAAGGACTTGCAGGCAACATATACTGCTTCCTAAGCTTTGAGCGATAGAGGCATG
JMSF026N02+           CTCCGCAAGGACTTGCAGGCAACATATACTGCTTCCTAAGCTTTGAGCGATAGAGGCATG
JMFN010K09+           CTCCACAGGGGCTTTCAGGCAACATATATTGCTTCCTAAGCTTAGAGCGATAGAAACATG
                      ____________________________________________________________
consensus             CTCCGCAAGGACTTGCAGGCAACATATACTGCTTCCTAAGCTTTGAGCGATAGAGGCATG
 
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rJMSF026N02-          AATAGAAACAAGGGCATCC---AAGAAGTGCTATGAGACAATACAGGGCTCCACTTGCCC
JMSF026N02+           AATAGAAACAAGGGCATCC---AAGAAGTGCTATGAGACAATACAGGGCTCCACTTGCCC
JMFN010K09+           AATAGAAACAAGGGCATCCAATAACAAATGCTATGAGACAATACAGGGCCCCACTTACGC
                      ____________________________________________________________
consensus             AATAGAAACAAGGGCATCC---AAGAAGTGCTATGAGACAATACAGGGCTCCACTTGCCC
 
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rJMSF026N02-          CACAAGAAGTTTCCCCTTTGTCCGTAATTTCAGCAATCCGTCCAAATGTGATGCACGGGC
JMSF026N02+           CACAAGAAGTTTCCCCTTTGTCCGTAATTTCAGCAATCCGTCCAAATGTGATGCACGGGC
JMFN010K09+           CACAAGAAATTGCCCCTTTGTCCGTAATTTCAGCAATTTGTCCAAATGTGATGCACGGGC
                      ____________________________________________________________
consensus             CACAAGAAGTTTCCCCTTTGTCCGTAATTTCAGCAATCCGTCCAAATGTGATGCACGGGC
 
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rJMSF026N02-          AACACCATGTTATGCAACAATTTGAGGCATCATCACAGCAGTCACAGAGACCGGAGGACC
JMSF026N02+           AACACCATGTTATGCAACAATTTGAGGCATCATCACAGCAGTCACAGAGACCGGAGGACC
JMFN010K09+           AAAAACATGTTATGAAACAATTTGAGACATCGTCACAGCAATTACAGAGATCGGAGGACC
                      ____________________________________________________________
consensus             AACACCATGTTATGCAACAATTTGAGGCATCATCACAGCAGTCACAGAGACCGGAGGACC
 
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rJMSF026N02-          AAACGGCGGGAGCTTGATT                                         
JMSF026N02+           AAACGGCGGGAGCTTGATT                                         
JMFN010K09+           AAACGGCGGGAGCTTGATTTTGTGGTGGCCCACCTACCGGGATGCCAGTCGGGGGCTCTT
                      ____________________________________________________________
consensus             AAACGGCGGGAGCTTGATTTTGTGGTGGCCCACCTACCGGGATGCCAGTCGGGGGCTCTT
 
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JMFN010K09+           TGTGAGGCGGCGGAGATTTATTATAATCGCTTGAAACTGATGGATACATATTTGAAGTAA
                      ____________________________________________________________
consensus             TGTGAGGCGGCGGAGATTTATTATAATCGCTTGAAACTGATGGATACATATTTGAAGTAA