Contig 011674:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFN007D14Sequence549011674 (2)ref|XP_009606344.1|7e-37PREDICTED: RPM1-interacting protein 4-like isoform X2 [Nicotiana tomentosiformi
JMFN034O04Sequence549011674 (2)ref|XP_009606344.1|7e-37PREDICTED: RPM1-interacting protein 4-like isoform X2 [Nicotiana tomentosiformi

Alignment

This contig is upended


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JMFN034O04+                                                              GCTCTACAA
JMFN007D14+                                                              GCTCTACAA
                      ____________________________________________________________
consensus                                                                GCTCTACAA
 
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JMFN034O04+           AGTACAAATCATTGATAAATGAAAATGATAAGTTTCTATGAAATACCAGATACAATTTCA
JMFN007D14+           AGTACAAATCATTGATAAATGAAAATGATAAGTTTCTATGAAATACCAGATACAATTTCA
                      ____________________________________________________________
consensus             AGTACAAATCATTGATAAATGAAAATGATAAGTTTCTATGAAATACCAGATACAATTTCA
 
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JMFN034O04+           TAGATACACAAAAATAAAAAATTGTCTTCACCAAATCTTATACGGTATACCCCAACCCTA
JMFN007D14+           TAGATACACAAAAATAAAAAATTGTCTTCACCAAATCTTATACGGTATACCCCAACCCTA
                      ____________________________________________________________
consensus             TAGATACACAAAAATAAAAAATTGTCTTCACCAAATCTTATACGGTATACCCCAACCCTA
 
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JMFN034O04+           ATACAATTTTACAGGACAAAGTAGGTTCCAGAGAAACCCAAGAGTGCCTTCAGCTCCTCC
JMFN007D14+           ATACAATTTTACAGGACAAAGTAGGTTCCAGAGAAACCCAAGAGTGCCTTCAGCTCCTCC
                      ____________________________________________________________
consensus             ATACAATTTTACAGGACAAAGTAGGTTCCAGAGAAACCCAAGAGTGCCTTCAGCTCCTCC
 
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JMFN034O04+           CCACATGCAAAATACGTGGGGATAATTATGAACATTCATTCTGAATTCAACTTTGCAGAG
JMFN007D14+           CCACATGCAAAATACGTGGGGATAATTATGAACATTCATTCTGAATTCAACTTTGCAGAG
                      ____________________________________________________________
consensus             CCACATGCAAAATACGTGGGGATAATTATGAACATTCATTCTGAATTCAACTTTGCAGAG
 
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JMFN034O04+           CCTTGTTAAGATTCTGCATGTGGGCTTTGCATGCAGCAACACCATTTTTTAGCTGGAGGT
JMFN007D14+           CCTTGTTAAGATTCTGCATGTGGGCTTTGCATGCAGCAACACCATTTTTTAGCTGGAGGT
                      ____________________________________________________________
consensus             CCTTGTTAAGATTCTGCATGTGGGCTTTGCATGCAGCAACACCATTTTTTAGCTGGAGGT
 
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JMFN034O04+           TTTGATTGATCTGCAGCATGCTTAGTATGAGCATCTGTCTTTGTTGGTGATTCTGGCTGG
JMFN007D14+           TTTGATTGATCTGCAGCATGCTTAGTATGAGCATCTGTCTTTGTTGGTGATTCTGGCTGG
                      ____________________________________________________________
consensus             TTTGATTGATCTGCAGCATGCTTAGTATGAGCATCTGTCTTTGTTGGTGATTCTGGCTGG
 
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JMFN034O04+           CCACCTGTTTTCTTCTCATCTCTGGCCTTATTAAAGATCACAGTAAACCCCTCTGCTGAA
JMFN007D14+           CCACCTGTTTTCTTCTCATCTCTGGCCTTATTAAAGATCACAGTAAACCCCTCTGCTGAA
                      ____________________________________________________________
consensus             CCACCTGTTTTCTTCTCATCTCTGGCCTTATTAAAGATCACAGTAAACCCCTCTGCTGAA
 
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JMFN034O04+           GCTGGGTCATTAACATCCCATTCACCAAACTTGGGCAATGGTCGACCGTTCTCCGACATG
JMFN007D14+           GCTGGGTCATTAACATCCCATTCACCAAACTTGGGCAATGGTCGACCGTTCTCCGACATG
                      ____________________________________________________________
consensus             GCTGGGTCATTAACATCCCATTCACCAAACTTGGGCAATGGTCGACCGTTCTCCGACATG
 
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JMFN034O04+           AATCCGGCAAAGAGATATTTGTTGGACAAAATGAGTTGTGCGTAGAGGAAGAGAAAGGGA
JMFN007D14+           AATCCGGCAAAGAGATATTTGTTGGACAAAATGAGTTGTGCGTAGAGGAAGAGAAAGGGA
                      ____________________________________________________________
consensus             AATCCGGCAAAGAGATATTTGTTGGACAAAATGAGTTGTGCGTAGAGGAAGAGAAAGGGA