| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF011C20 | Sequence | 515 | 011668 (6) | ref|XP_004241771.1| | 8e-64 | PREDICTED: uncharacterized protein At2g34160 [Solanum lycopersicum] | 628 | 011668 (6) | ref|XP_004241771.1| | 3e-63 | PREDICTED: uncharacterized protein At2g34160 [Solanum lycopersicum] |
| JMFF020N08 | Sequence | 555 | 011668 (6) | ref|XP_004241771.1| | 1e-63 | PREDICTED: uncharacterized protein At2g34160 [Solanum lycopersicum] | 685 | 011668 (6) | ref|XP_004241781.1| | 3e-56 | PREDICTED: uncharacterized protein At2g34160 [Solanum lycopersicum] |
| JMFN005G01 | Sequence | 594 | 011668 (6) | ref|XP_004241771.1| | 4e-59 | PREDICTED: uncharacterized protein At2g34160 [Solanum lycopersicum] | |||||
| JMFN030G02 | Sequence | 617 | 011668 (6) | ref|XP_004241771.1| | 3e-63 | PREDICTED: uncharacterized protein At2g34160 [Solanum lycopersicum] | |||||
This contig is upended
. : . : . : . : . : . :
JMFF011C20- TGAGACTTGAGAGAGAGGG
rJMFF011C20+ TGAGACTTGAGAGAGAGGG
JMFN030G02- GGG
JMFF020N08- TGAGACTTGAGAGAGAGGG
rJMFF020N08+ TGAGGTGAGACTTGAGAGAGAGGG
____________________________________________________________
consensus TGAGGTGAGACTTGAGAGAGAGGG
. : . : . : . : . : . :
JMFF011C20- GAGTTAAAGAGAGAGAGAGAGATAGAGAGAGAGGGAGGTTGAAGTTAGGGTTTTGAAGAA
rJMFF011C20+ GAGTTAAAGAGAGAGAGAGAGATAGAGAGAGAGGGAGGTTGAAGTTAGGGTTTTGAAGAA
JMFN030G02- GAGTTAAAGAGAGAGAGAGAGATAGAGAGAGAGGGAGGTTGAAGTTAGGGTTTTGAAGAA
JMFF020N08- GAGTTAAAGAGAGAGAGAGAGATAGAGAGAGAGGGAGGTTGAAGTTAGGGTTTTGAAGAA
rJMFF020N08+ GAGTTAAAGAGAGAGAGAGAGATAGAGAGAGAGGGAGGTTGAAGTTAGGGTTTTGAAGAA
____________________________________________________________
consensus GAGTTAAAGAGAGAGAGAGAGATAGAGAGAGAGGGAGGTTGAAGTTAGGGTTTTGAAGAA
. : . : . : . : . : . :
JMFF011C20- GGGGAAGAGGAAGAAAAACAATGGAGGCTATCACAGAGGGAATCAACAACGTTAATATTT
rJMFF011C20+ GGGGAAGAGGAAGAAAAACAATGGAGGCTATCACAGAGGGAATCAACAACGTTAATATTT
JMFN030G02- GGGGAAGAGGAAGAAAAACAATGGAGGCTATCACAGAGGGAATCAACAACGTTAATATTT
JMFF020N08- GGGGAAGAGGAAGAAAAACAATGGAGGCTATCACAGAGGGAATCAACAACGTTAATATTT
rJMFF020N08+ GGGGAAGAGGAAGAAAAACAATGGAGGCTATCACAGAGGGAATCAACAACGTTAATATTT
____________________________________________________________
consensus GGGGAAGAGGAAGAAAAACAATGGAGGCTATCACAGAGGGAATCAACAACGTTAATATTT
. : . : . : . : . : . :
JMFF011C20- CTTCTACCAACTCCGAACCCCAAAAG-AAGAACCGAATCCAAGTCTCCAACACCAAGAAA
rJMFF011C20+ CTTCTACCAACTCCGAACCCCAAAAG-AAGAACCGAATCCAAGTCTCCAACACCAAGAAA
JMFN030G02- CTTCTACCAACTCCGAACCCCAAAAG-AAGAACCGAATCCAAGTCTCCAACACCAAGAAA
JMFF020N08- CTTCTACCAACTCCGAACCCCAAAAG-AAGAACCGAATCCAAGTCTCCAACACCAAGAAA
rJMFF020N08+ CTTCTACCAACTCCGAACCCCAAAAGAAAGAACCGAATCCAAGTCTCCAACACCAAGAAA
JMFN005G01+ ACCAACTCCGAACCCCAAAAG-AAGAACCGAATCCAAGTCTCCAACACCAAGAAA
____________________________________________________________
consensus CTTCTACCAACTCCGAACCCCAAAAG-AAGAACCGAATCCAAGTCTCCAACACCAAGAAA
. : . : . : . : . : . :
JMFF011C20- TCCCTCTTCTTCTATGTCAACCTATCCAAGAGGTACCTGCAACAATACAATGAAGTGGAA
rJMFF011C20+ TCCCTCTTCTTCTATGTCAACCTATCCAAGAGGTACCTGCAACAATACAATGAAGTGGAA
JMFN030G02- TCCCTCTTCTTCTATGTCAACCTATCCAAGAGGTACCTGCAACAATACAATGAAGTGGAA
JMFF020N08- TCCCTCTTCTTCTATGTCAACCTATCCAAGAGGTACCTGCAACAATACAATGAAGTGGAA
rJMFF020N08+ TCCCTCTTCTTCTATGTCAACCTATCCAAGAGGTACCTGCAACAATACAATGAAGTGGAA
JMFN005G01+ TCCCTCTTCTTCTATGTCAACCTATCCAAGAGGTACCTGCAACAATACAATGAAGTGGAA
____________________________________________________________
consensus TCCCTCTTCTTCTATGTCAACCTATCCAAGAGGTACCTGCAACAATACAATGAAGTGGAA
. : . : . : . : . : . :
JMFF011C20- CTCTCTGCACTTGGAATGGCTATCTCTACAGTGGTTACAGTTGCTGAAATATTGAAGAAC
rJMFF011C20+ CTCTCTGCACTTGGAATGGCTATCTCTACAGTGGTTACAGTTGCTGAAATATTGAAGAAC
JMFN030G02- CTCTCTGCACTTGGAATGGCTATCTCTACAGTGGTTACAGTTGCTGAAATATTGAAGAAC
JMFF020N08- CTCTCTGCACTTGGAATGGCTATCTCTACAGTGGTTACAGTTGCTGAAATATTGAAGAAC
rJMFF020N08+ CTCTCTGCACTTGGAATGGCTATCTCTACAGTGGTTACAGTTGCTGAAATATTGAAGAAC
JMFN005G01+ CTCTCTGCACTTGGAATGGCTATCTCTACAGTGGTTACAGTTGCTGAAATATTGAAGAAC
____________________________________________________________
consensus CTCTCTGCACTTGGAATGGCTATCTCTACAGTGGTTACAGTTGCTGAAATATTGAAGAAC
. : . : . : . : . : . :
JMFF011C20- AATGGGTTTGCCATTGAAAAGAAGATAAGGACACTTACAGTGGACATGAGAGATGAACCA
rJMFF011C20+ AATGGGTTTGCCATTGAAAAGAAGATAAGGACACTTACAGTGGACATGAGAGATGAACCA
JMFN030G02- AATGGGTTTGCCATTGAAAAGAAGATAAGGACACTTACAGTGGACATGAGAGATGAACCA
JMFF020N08- AATGGGTTTGCCATTGAAAAGAAGATAAGGACACTTACAGTGGACATGAGAGATGAACCA
rJMFF020N08+ AATGGGTTTGCCATTGAAAAGAAGATAAGGACACTTACAGTGGACATGAGAGATGAACCA
JMFN005G01+ AATGGGTTTGCCATTGAAAAGAAGATAAGGACACTTACAGTGGACATGAGAGATGAACCA
____________________________________________________________
consensus AATGGGTTTGCCATTGAAAAGAAGATAAGGACACTTACAGTGGACATGAGAGATGAACCA
. : . : . : . : . : . :
JMFF011C20- GGAAGTCGACCTGTATCAAAAGCTAGGATTGAGGTAGTGCTGGGGAAGACGGAGAAGTTT
rJMFF011C20+ GGAAGTCGACCTGTATCAAAAGCTAGGATTGAGGTAGTGCTGGGGAAGACGGAGAAGTTT
JMFN030G02- GGAAGTCGACCTGTATCAAAAGCTAGGATTGAGGTAGTGCTGGGGAAGACGGAGAAGTTT
JMFF020N08- GGAAGTCGACCTGTATCAAAAGCTAGGATTGAGGTAGTGCTGGGGAAGACGGAGAAGTTT
rJMFF020N08+ GGAAGTCGACCTGTATCAAAAGCTAGGATTGAGGTAGTGCTGGGGAAGACGGAGAAGTTT
JMFN005G01+ GGAAGTCGACCTGTATCAAAAGCTAGGATTGAGGTAGTGCTGGGGAAGACGGAGAAGTTT
____________________________________________________________
consensus GGAAGTCGACCTGTATCAAAAGCTAGGATTGAGGTAGTGCTGGGGAAGACGGAGAAGTTT
. : . : . : . : . : . :
JMFF011C20- GATGAACTGATGGCTGCCGAAGCTGAGCAAGCTGGAGGTGGTGAGGAGAGCAGAACTGAA
rJMFF011C20+ GATGAACTGATGGCTGCCGAAGCTGAGCAAGCTGGAGGTGGTGAGGAGAGCAGAACTGAA
JMFN030G02- GATGAACTGATGGCTGCCGAAGCTGAGCAAGCTGGAGGTGGTGAGGAGAGCAAAACTGAA
JMFF020N08- GATGAACTGATGGCTGCCGAAGCTGAGCAAGCTGGAGGTGGTGAGGAGAGCAGAACTGAA
rJMFF020N08+ GATGAACTGATGGCTGCCGAAGCTGAGCAAGCTGGAGGTGGTGAGGAGAGCAGAACTGAA
JMFN005G01+ GATGAACTGATGGCTGCCGAAGCTGAGCAAGCTGGAGGTGGTGAGGAGAGCAGAACTGAA
____________________________________________________________
consensus GATGAACTGATGGCTGCCGAAGCTGAGCAAGCTGGAGGTGGTGAGGAGAGCAGAACTGAA
. : . : . : . : . : . :
JMFF011C20- TCCTAAAGATTACATTT
rJMFF011C20+ TCCTAAAGATTACATTTGTAGTAGTTGGTATTGTGCTCCGTTAGCAGCTTCCCCAGGCTA
JMFN030G02- TCCTAAAGATTACATTTGTAGTAGTTGGTATTGTGCTCCGTTAGCAGCTTCCCCAGGCTA
JMFF020N08- TCCTAAAGATTACATTTGTAGTAGTTGGTATTGTGCTCCGTTAGCAGCTTCC
rJMFF020N08+ TCCTAAAGATTACATTTGTAGTAGTTGGTATTGTGCTCCGTTAGCAGCTTCCCCAGGCTA
JMFN005G01+ TCCTAAAGATTACATTTGTAGTAGTTGGTATTGTGCTCCGTTAGCAGCTTCCCCAGGCTA
____________________________________________________________
consensus TCCTAAAGATTACATTTGTAGTAGTTGGTATTGTGCTCCGTTAGCAGCTTCCCCAGGCTA
. : . : . : . : . : . :
rJMFF011C20+ GTGATGTTTTAGAACTCATAAATTAGAGTTTTAAGAAAATTCTTGTTTAAAAAACTTATA
JMFN030G02- GTGATGTTTTAGAACTCATAAATTAGAGTTTTAAAAAAATTCTTGTTTAAAAAACTTATA
rJMFF020N08+ GTGATGTTTTAGAACTCATAAATTAGAGTTTTAAAAAAATTCTTGTTTAAAAAACTTATA
JMFN005G01+ GTGATGTTTTAGAACTCATAAATTAGAGTTTTAAAAAAATTCTTGTTTAAAAAACTTATA
____________________________________________________________
consensus GTGATGTTTTAGAACTCATAAATTAGAGTTTTAAAAAAATTCTTGTTTAAAAAACTTATA
. : . : . : . : . : . :
rJMFF011C20+ ATTCATTAAT
JMFN030G02- ATTCATTAAT
rJMFF020N08+ ATTCATTAATTTGGTAGATGACTTGATAATTAGCAATGTTTGTATGTTCTTGTATGCAGT
JMFN005G01+ ATTCATTAATTTGGTAGATGACTTGATAATTAGCAATGTTTGTATGTTCTTGTATGCAGT
____________________________________________________________
consensus ATTCATTAATTTGGTAGATGACTTGATAATTAGCAATGTTTGTATGTTCTTGTATGCAGT
. : . : . : . : . : . :
rJMFF020N08+ A
JMFN005G01+ ATTGCAATCTTTTGTTTCTGTGTXXXXXXXXXXXXXXXXXXXXXCTCGAGACTAGTTCTC
____________________________________________________________
consensus ATTGCAATCTTTTGTTTCTGTGTNNNNNNNNNNNNNNNNNNNNNCTCGAGACTAGTTCTC