Contig 011664:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF014F13Sequence547015232ref|XP_011070586.1|58.9PREDICTED: uncharacterized protein LOC105156211 [Sesamum indicum]414011664 (2)gb|AEC10961.1|2e-27ribosomal protein s28 [Camellia sinensis]
JMFN004C05Sequence318011664 (2)gb|AEC10961.1|5e-09ribosomal protein s28 [Camellia sinensis]

Alignment

This contig is upended


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rJMFF014F13+ CTCGCCCCGTTCCATCTCCTCCAA
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consensus CTCGCCCCGTTCCATCTCCTCCAA
 
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rJMFF014F13+ CCCTAGTTCAGAGCGGCCGTAGCTTCCCTCCTCTCCTNTCAATCTNTGAAGAATGGAGTC
                      ____________________________________________________________
consensus CCCTAGTTCAGAGCGGCCGTAGCTTCCCTCCTCTCCTNTCAATCTNTGAAGAATGGAGTC
 
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rJMFF014F13+ TCAGATCAAGCATGCTATTGTGGTGAAGGTTATGGGTCGTACTGGATCCAGAGGACAAGT
                      ____________________________________________________________
consensus TCAGATCAAGCATGCTATTGTGGTGAAGGTTATGGGTCGTACTGGATCCAGAGGACAAGT
 
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rJMFF014F13+ GACTCAGGTGCGGGTCAAGTTTATTGATGACCAGAACAGGTTTATCATGAGGAATGTCAA
JMFN004C05- GGGTCAAGTTTATTGATGACCAGAACAGGTTTATCATGAGGAATGTCAA
                      ____________________________________________________________
consensus GACTCAGGTGCGGGTCAAGTTTATTGATGACCAGAACAGGTTTATCATGAGGAATGTCAA
 
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rJMFF014F13+ GGGACCAGTCAGAGAGGGTGATGTGCTCACTCTGCTGGAGTCCGAGAGGGAAGCCAGGAG
JMFN004C05- GGGACCAGTCAGAGAGGGTGATGTGCTCACTCTGCTGGAGTCCGAGAGGGAAGCCAGGAG
                      ____________________________________________________________
consensus GGGACCAGTCAGAGAGGGTGATGTGCTCACTCTGCTGGAGTCCGAGAGGGAAGCCAGGAG
 
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rJMFF014F13+ GTTGCGCTGAT
JMFN004C05- GTTGCGCTGATCGATTGCCTTGCTATATATCTTGATTGCATCTTGAAAGGGCGTTAAATA
                      ____________________________________________________________
consensus GTTGCGCTGATCGATTGCCTTGCTATATATCTTGATTGCATCTTGAAAGGGCGTTAAATA
 
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JMFN004C05- CGCAGAATGTATTATCAGTTTTGGTGCACTACTTAATAGCTTTCTTGGATTATGGCAGTT
                      ____________________________________________________________
consensus CGCAGAATGTATTATCAGTTTTGGTGCACTACTTAATAGCTTTCTTGGATTATGGCAGTT
 
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JMFN004C05- TGTTAAATTTGGACAAATGCGTGACTTTATTTAATGGATTTGATATGATTGAATCTGTTT
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consensus TGTTAAATTTGGACAAATGCGTGACTTTATTTAATGGATTTGATATGATTGAATCTGTTT