Contig 011660:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF019H22Sequence576011660 (12)ref|XP_009622831.1|2e-58PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]718008405 (10)ref|XP_006360726.1|1e-70PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum]
JMFF025G07Sequence487011660 (12)ref|XP_009622831.1|9e-47PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]
JMFF029E11Sequence498011660 (12)ref|XP_009622831.1|2e-47PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]685008405 (10)gb|AFU52665.1|1e-35putative PD beta-1,3-glucanase 1 [Solanum tuberosum]
JMFF035K09Sequence485011660 (12)ref|XP_009622831.1|2e-44PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]665008405 (10)ref|XP_006360726.1|2e-60PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum]
JMFF036P21Sequence431011660 (12)ref|XP_009622831.1|1e-41PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]663008405 (10)ref|XP_006360726.1|2e-62PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum]
JMFF037I23Sequence366011660 (12)ref|XP_009622831.1|2e-28PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]
JMFF037J11Sequence367011660 (12)ref|XP_009622831.1|8e-29PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]
JMFF051F06Sequence495011660 (12)ref|XP_009622831.1|1e-45PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]462008405 (10)
JMFS158B03Sequence376011660 (12)ref|XP_009622831.1|2e-41PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]
JMSF003G07Sequence381011660 (12)ref|XP_009622831.1|7e-28PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]742008405 (10)ref|XP_006360726.1|6e-60PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum]
JMSF017E23Sequence447011660 (12)ref|XP_009622831.1|5e-46PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]745008405 (10)ref|XP_006360726.1|8e-61PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum]
JMSF046L04Sequence752011660 (12)ref|XP_009622831.1|1e-98PREDICTED: glucan endo-1,3-beta-glucosidase 11 [Nicotiana tomentosiformis]719008405 (10)ref|XP_006360726.1|9e-68PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum tuberosum]

Alignment

This contig is upended


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JMSF046L04+                                           GGAACAGCACGAAATCCAGCTTCCACAT
                      ____________________________________________________________
consensus                                             GGAACAGCACGAAATCCAGCTTCCACAT
 
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JMSF046L04+           GGTTGGGATGCGCCTTGTAGGCGAAATACGGATACGCATTGATGAGAAAAGGGGATCCGG
                      ____________________________________________________________
consensus             GGTTGGGATGCGCCTTGTAGGCGAAATACGGATACGCATTGATGAGAAAAGGGGATCCGG
 
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JMSF046L04+           TTTTGACATGGAACTTGAGGATCTCGCAAACGCAGGCCACCAGATCTCGCTTGAAAGCCC
                      ____________________________________________________________
consensus             TTTTGACATGGAACTTGAGGATCTCGCAAACGCAGGCCACCAGATCTCGCTTGAAAGCCC
 
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JMSF046L04+           CGGAGGACGGCGGATACGACGACTCCAGCACCGCCAGGGAGTGCGCCGTCGTCACGTCGA
                      ____________________________________________________________
consensus             CGGAGGACGGCGGATACGACGACTCCAGCACCGCCAGGGAGTGCGCCGTCGTCACGTCGA
 
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JMFS158B03+                                 CACCAGAGCGGCGTGAACGCTGTACATAGCCGGGAGGA
JMSF046L04+           TCTCCCCCTCCAGGTTTAGCTTCACCAGAGCGGCGTGAACGCTGTACATAGCCGGGAGGA
JMFF019H22+                                 CACCAGAGCGGCGTGAACGCTGTACATAGCCGGGAGGA
                      ____________________________________________________________
consensus             TCTCCCCCTCCAGGTTTAGCTTCACCAGAGCGGCGTGAACGCTGTACATAGCCGGGAGGA
 
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JMFS158B03+           GGTAGTTGGCGAGAGAGGCGTCCTTGGAGCTCAGGACCTCGTTCCCGACGGCGATGCAGG
JMSF046L04+           GGTAGTTGGCGAGAGATGCGTCCTTGGAGCTCAGGACCTCGTTCCCGACGGCGATGCAGG
JMFF029E11+                                                   GTTCCCGACGGCGATGCAGG
JMFF025G07+                                                      CCCGACGGCGATGCAGG
JMFF035K09+                                                          ACGGCGATGCAGG
JMSF017E23+                                                         GACGGCGATGCAGG
JMFF019H22+           GGTAGTTGGCGAGAGAGGCGTCCTTGGAGCTCAGGACCTCGTTCCCGACGGCGATGCAGG
JMFF051F06+                                                       CCGACGGCGATGCAGG
                      ____________________________________________________________
consensus             GGTAGTTGGCGAGAGAGGCGTCCTTGGAGCTCAGGACCTCGTTCCCGACGGCGATGCAGG
 
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JMFS158B03+           TGATTTTGGTCGCCGGTAAATACGCCGCCACGTTNTGCCTCACCCACGCCTCCGCTTTCT
JMSF046L04+           TGATTTTGGTCGCCGGTAAATACGCCGCCACGTTCTGCCTCACCCACGCCTCCGCTTTCT
JMFF029E11+           TGATTTTGGTCGCCGGTAAATACGCCGCCACGTTCTGCCTCACCCACGCCTCCGCTTTCT
JMFF025G07+           TGATTTTGGTCGCCGGTAAATACGCCGCCACGTTCTGCCTCACCCACGCCTCCGCTTTCT
JMFF035K09+           TGATTTTGGTCGCCGGTAAATACGCCGCCACGTTCTGCCTCACCCACGCCTCCGCTTTCT
JMSF017E23+           TGATTTTGGTCGCCGGTAAATACGCCGCCACGTTCTGCCTCACCCACGCCTCCGCTTTCT
JMFF036P21+               TTTGGTCGCCGGTAAATACGCCGCCACGTTCTGCCTCACCCACGCCTCCGCTTTCT
JMFF019H22+           TGATTTTGGTCGCCGGTAAATACGCCGCCACGTTCTGCCTCACCCACGCCTCCGCTTTCT
JMFF051F06+           TGATTTTGGTCGCCGGTAAATACGCCGCCACGTTTTGCCTCACCCACGCCTCCGCTTTNT
                      ____________________________________________________________
consensus             TGATTTTGGTCGCCGGTAAATACGCCGCCACGTTCTGCCTCACCCACGCCTCCGCTTTCT
 
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JMFS158B03+           CAGGATCCTTCACTTTACACAGCTCGCCTGTTGGTAACACTCACAATGAACTCCACGTTC
JMSF046L04+           CAGGATCCTTCACTTTACACAGCTCG-TTGTTGGTAACACTCACAATGAACTCCACGTTC
JMFF029E11+           CAGGATCCTTCACTTTACACAGCTCG-TTGTTGGTAACACTCACAATGAACTCCACGTTC
JMFF025G07+           CAGGATCCTTCACTTTACACAGCTCG-TTGTTGGTAACACTCACAATGAACTCCACGTTC
JMFF035K09+           CAGGATCGTTCACTTTACACAGCTCG-TTGTTGGTAACACTCACAATGAACTCCACGTTC
JMSF017E23+           CAGGATCCTTCACTTTACACAGCTCG-TTGTTGGTAACACTCACAATGAACTCCACGTTC
JMFF036P21+           CAGGATCCTTCACTTTACACAGCTCG-TTGTTGGTAACACTCACAATGAACTCCACGTTC
JMSF003G07+                                            GTAACACTCACAATGAACTCCACGTTC
JMFF037I23+                   TTCACTTTACACAGCTCG-TTGTTGGTAACACTCACAATGAACTCCACGTTC
JMFF037J11+                              CAGCTCG-TTGTTGGTAACACTCACAATGAACTCCACGTTC
JMFF019H22+           CAGGATCCTTCACTTTACACAGCTCG-TTGTTGGTAACACTCACAATGAACTCCACGTTC
JMFF051F06+           CAGGATCCTTCACTTTACACAGCTCG-TTGTTGGTAACACTCACAATGAACTCCACGTTC
                      ____________________________________________________________
consensus             CAGGATCCTTCACTTTACACAGCTCG-TTGTTGGTAACACTCACAATGAACTCCACGTTC
 
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JMFS158B03+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
JMSF046L04+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
JMFF029E11+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
JMFF025G07+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
JMFF035K09+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
JMSF017E23+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
JMFF036P21+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
JMSF003G07+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
JMFF037I23+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
JMFF037J11+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
JMFF019H22+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
JMFF051F06+           GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
                      ____________________________________________________________
consensus             GTGTTGGCGAAGGCTTTCAGCACCTTTGAATCCGCGTCGTAAAGCTTCAGCCTCGTTACG
 
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JMFS158B03+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
JMSF046L04+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
JMFF029E11+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
JMFF025G07+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
JMFF035K09+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
JMSF017E23+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
JMFF036P21+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
JMSF003G07+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
JMFF037I23+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
JMFF037J11+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
JMFF019H22+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
JMFF051F06+           CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
                      ____________________________________________________________
consensus             CCCATGGACTTCACCAGCGGAACCACATTTTCCGGCGACGGCAGGTTGTTCGCAATCTGC
 
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JMFS158B03+           CCGTAATTGATGCCAATGCTAGTCACCACCA                             
JMSF046L04+           CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
JMFF029E11+           CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
JMFF025G07+           CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
JMFF035K09+           CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
JMSF017E23+           CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
JMFF036P21+           CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
JMSF003G07+           CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
JMFF037I23+           CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
JMFF037J11+           CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
JMFF019H22+           CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
JMFF051F06+           CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
                      ____________________________________________________________
consensus             CCGTAATTGATGCCAATGCTAGTCACCACCACCGGCCAAAACATCACTGAGAAAAACAGT
 
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JMSF046L04+           GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
JMFF029E11+           GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
JMFF025G07+           GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
JMFF035K09+           GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
JMSF017E23+           GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
JMFF036P21+           GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
JMSF003G07+           GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
JMFF037I23+           GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
JMFF037J11+           GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
JMFF019H22+           GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
JMFF051F06+           GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
                      ____________________________________________________________
consensus             GGAACTGAAAAACGGAGTTGAGAATTGAAGAAGAAAGCTTGCGGTTCCATCTAATTTAGT
 
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JMSF046L04+           AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
JMFF029E11+           AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
JMFF025G07+           AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
JMFF035K09+           AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
JMSF017E23+           AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
JMFF036P21+           AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
JMSF003G07+           AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
JMFF037I23+           AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
JMFF037J11+           AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
JMFF019H22+           AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
JMFF051F06+           AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
                      ____________________________________________________________
consensus             AAGCGGCGGCGGTGGTGACCAGGGTGGCGCGCGGTGGAGTGAGAATGAATGCCAGTTGGA
 
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JMSF046L04+           ATGT                                                        
JMFF029E11+           ATGTGGATGAACACTGCTCTGCTCACAAGTGAAGTAAAGGAGGAGTAGAGCAC       
JMFF025G07+           ATGTGGATGAACACTGCTCTGCTCACAAGTGAAGTAAAGGAGGAGTAGAGC         
JMFF035K09+           ATGTGGATGAACACTGCTCTGCTCACAAGTGAAGTAAAGGAGGAGTAGAGCAC       
JMSF017E23+           ATGTGGAT                                                    
JMFF036P21+           ATGTGGAT                                                    
JMSF003G07+           ATGTGGATGAACACTGCTCTGCTCACAAGTGAAGTAAAGGAGGAGTAGAGCAC       
JMFF037I23+           ATGTGGATGAACACT                                             
JMFF037J11+           ATGTGGATGAACACT                                             
JMFF019H22+           ATGTGGATGAACACTGCTCTGCTCACAAGTGAAGTAAAGGAGGAGTAGAGCAC       
JMFF051F06+           ATGTGGATGAACACTGCTCTGCTCACAAGTGAAGTAAAGGAGGAGTAGAGCACAGAGACC
                      ____________________________________________________________
consensus             ATGTGGATGAACACTGCTCTGCTCACAAGTGAAGTAAAGGAGGAGTAGAGCACAGAGACC