Contig 011658:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF051B06Sequence527011658 (4)ref|XP_010317678.1|4e-37PREDICTED: proton-coupled amino acid transporter 3-like [Solanum lycopersicum]400020261ref|XP_004232573.1|8e-26PREDICTED: proton-coupled amino acid transporter 3-like [Solanum lycopersicum]
JMSF007K01Sequence457011658 (4)ref|XP_004232573.1|7e-60PREDICTED: proton-coupled amino acid transporter 3-like [Solanum lycopersicum]754008673 (3)ref|XP_009801334.1|3e-78PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana sylvestris]
JMSF047B07Sequence727011658 (4)ref|XP_009588847.1|1e-113PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana tomentosifor621008673 (3)ref|XP_009801334.1|2e-66PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana sylvestris]
JMSF050B03Sequence688011658 (4)ref|XP_009588847.1|1e-120PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana tomentosifor744008673 (3)ref|XP_009801334.1|3e-93PREDICTED: proton-coupled amino acid transporter 3-like [Nicotiana sylvestris]

Alignment

This contig is upended


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JMSF050B03+                                          CCAAAGGCCTGCAGAACTGGCCTGTTCTG
JMSF047B07+                                                                  TTCTG
                      ____________________________________________________________
consensus                                            CCAAAGGCCTGCAGAACTGGCCTGTTCTG
 
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JMSF050B03+           CAGGTACACCATTACATCCTCAACCATCACAGTACCCATGGCCCCCAAATCCACCACATC
JMSF047B07+           CAGGTACACCATTACATCNTCAACCATCACAGTACCCATGGCCCCCAAATCCACCACATC
                      ____________________________________________________________
consensus             CAGGTACACCATTACATCCTCAACCATCACAGTACCCATGGCCCCCAAATCCACCACATC
 
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JMSF050B03+           AGCAAAGATACTCAATGGGGCTAAATGGGTAAGTGTCTGGATTGAGTTCAACCCAAGCTG
JMSF047B07+           AGCAAAGATACTCAATGGGGCTAAATGGGTAAGTGTCTGGATTGAGTTCAACCCAAGCTG
                      ____________________________________________________________
consensus             AGCAAAGATACTCAATGGGGCTAAATGGGTAAGTGTCTGGATTGAGTTCAACCCAAGCTG
 
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JMSF050B03+           GAAAGGGAAACAGCTCCATACATACACAACTATTGGGGAAATCCCAATGATTTTAGGGTC
JMSF047B07+           GAAAGGGAAACAGCTCCATACATACACAACTATTGGGGAAATCCCAATGATTTTAGGGTC
                      ____________________________________________________________
consensus             GAAAGGGAAACAGCTCCATACATACACAACTATTGGGGAAATCCCAATGATTTTAGGGTC
 
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JMSF050B03+           TGGGTTGGTGACAGTTTCATGGTTAAATATGTTTGCTAAAGTGCTGGCTATGAAAATCAT
JMSF047B07+           TGGGTTGGTGACAGTTTCATGGTTAAATATGTTTGCTAAAGTGCTGGCTATGAAAATCAT
                      ____________________________________________________________
consensus             TGGGTTGGTGACAGTTTCATGGTTAAATATGTTTGCTAAAGTGCTGGCTATGAAAATCAT
 
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JMSF050B03+           GTAACTTACACAGAACCCAGCTTGGGAGAGAACAATCATAGCATCAACTGCAGCCCTTCC
JMSF007K01+                                                 TAGCATCAACTGCAGCCCTTCC
JMSF047B07+           GTAACTTACACAGAACCCAGCTTGGGAGAGAACAATCATAGCATCAACTGCAGCCCTTCC
                      ____________________________________________________________
consensus             GTAACTTACACAGAACCCAGCTTGGGAGAGAACAATCATAGCATCAACTGCAGCCCTTCC
 
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JMSF050B03+           AACAGGCCCACACACAGCAAACCCCAGATCTCCAAAAGATGAGATCTTGAAGGCCTTCTT
JMSF007K01+           AACAGGCCCACACACAGCAAACCCCAGATCTCCAAAAGATGAGATCTTGAAGGCCTTCTT
JMSF047B07+           AACAGGCCCACACACAGCAAACCCCAGATCTCCAAAAGATGAGATCTTGAAGGCCTTCTT
                      ____________________________________________________________
consensus             AACAGGCCCACACACAGCAAACCCCAGATCTCCAAAAGATGAGATCTTGAAGGCCTTCTT
 
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JMSF050B03+           GGGGTGAGATTCGAGCTTCCTTCTTGAATTGACTAAGAGCATCATGCAGTAGTAGGTCAA
JMSF007K01+           GGGGTGAGATTCGAGCTTCCTTCTTGAATTGACTAAGAGCATCATGCAGTAGTAGGTCAA
JMSF047B07+           GGGGTGAGATTCGAGCTTCCTTCTTGAATTGACTAAGAGCATCATGCAGTAGTAGGTCAA
                      ____________________________________________________________
consensus             GGGGTGAGATTCGAGCTTCCTTCTTGAATTGACTAAGAGCATCATGCAGTAGTAGGTCAA
 
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JMSF050B03+           GAAGGCGACGGAGAAGAGGAGGATGACTCCCATGGCCCACCCTGTTCTCCTGAAAGTGTA
JMSF007K01+           GAAGGCGACGGAGAAGAGGAGGATGACTCCCATGGCCCACCCTGTTCTCCTGAAAGTGTA
JMSF047B07+           GAAGGCGACGGAGAAGAGGAGGATGACTCCCATGGCCCACCCTGTTCTCCTGAAAGTGTA
JMFF051B06+                                              CCCACCCTGTTCTCTTGAAGGTGTA
                      ____________________________________________________________
consensus             GAAGGCGACGGAGAAGAGGAGGATGACTCCCATGGCCCACCCTGTTCTCCTGAAAGTGTA
 
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JMSF050B03+           AGGGAGGCCAAGAACACCCGCCCCAACTATGGCTATGAACACATTGGCGAAGGTCTT   
JMSF007K01+           AGGGAGGCCAAGAACACCCGCCCCAACTATGGCTATGAACACATTGGCGAAGGTCTT   
JMSF047B07+           AGGGAGGCCAAGAACACCCGCCCCAACTATGGCTATGAACACATTGGCGAAGGTCTT   
JMFF051B06+           AGGAAGGCCAAGCACACCCGCCCCCACTATTGCTATGAAAACATTGGCAAAGGTCTTGAA
                      ____________________________________________________________
consensus             AGGGAGGCCAAGAACACCCGCCCCAACTATGGCTATGAACACATTGGCGAAGGTCTTGAA
 
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JMFF051B06+           TGAAGACGACAGGCGCTTGTGATCGGAAAGGAGTGGGGTGTCTTCTCTGGGGATGTGGAG
                      ____________________________________________________________
consensus             TGAAGACGACAGGCGCTTGTGATCGGAAAGGAGTGGGGTGTCTTCTCTGGGGATGTGGAG
 
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JMFF051B06+           GACATAGGAGGATGAACTCGCTTCATCTTTCTCAAGCCCCATTGTATCCTAATTGGTCGC
                      ____________________________________________________________
consensus             GACATAGGAGGATGAACTCGCTTCATCTTTCTCAAGCCCCATTGTATCCTAATTGGTCGC
 
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JMFF051B06+           CCTTAGAAACCCTAGAAACCCAGGAAACCCAATTGAGGCAGCTTCTCTGAATCTCTGAAT
                      ____________________________________________________________
consensus             CCTTAGAAACCCTAGAAACCCAGGAAACCCAATTGAGGCAGCTTCTCTGAATCTCTGAAT
 
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JMFF051B06+           CGCTGAATCTCTGGATAATTAAGGAATTATGGATCAAGAAAATAAGAAACGCTGTATCAA
                      ____________________________________________________________
consensus             CGCTGAATCTCTGGATAATTAAGGAATTATGGATCAAGAAAATAAGAAACGCTGTATCAA
 
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JMFF051B06+           ATAATTCAAATCAACTGATTAACTTTTCGCTATCTTTCTTGATCAAATTTGCTTCAGAAA
                      ____________________________________________________________
consensus             ATAATTCAAATCAACTGATTAACTTTTCGCTATCTTTCTTGATCAAATTTGCTTCAGAAA
 
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JMFF051B06+           ATGAGCAGAAAGAATGGGATTAGAGAATAATGGCAGGGTGGAAAATAGAGGCGTGATGGT
                      ____________________________________________________________
consensus             ATGAGCAGAAAGAATGGGATTAGAGAATAATGGCAGGGTGGAAAATAGAGGCGTGATGGT