Contig 011657:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF002I22Sequence488011657 (6)gb|ABB40579.2|2e-641-aminocyclopropane-1-carboxylate synthase [Ipomoea nil]743004035 (4)gb|ABB40579.2|7e-1171-aminocyclopropane-1-carboxylate synthase [Ipomoea nil]
JMFF020F11Sequence581011657 (6)gb|ABB40579.2|4e-881-aminocyclopropane-1-carboxylate synthase [Ipomoea nil]734004035 (4)gb|ABB40579.2|6e-1171-aminocyclopropane-1-carboxylate synthase [Ipomoea nil]
JMFF021F23Sequence547011657 (6)gb|ABB40579.2|5e-981-aminocyclopropane-1-carboxylate synthase [Ipomoea nil]566014846gb|ABB40579.2|1e-121-aminocyclopropane-1-carboxylate synthase [Ipomoea nil]
JMFF026G16Sequence517011657 (6)gb|ABB40579.2|4e-721-aminocyclopropane-1-carboxylate synthase [Ipomoea nil]828004035 (4)gb|ABB40579.2|2e-1281-aminocyclopropane-1-carboxylate synthase [Ipomoea nil]
JMFF030G19Sequence446011657 (6)gb|ABB40579.2|8e-571-aminocyclopropane-1-carboxylate synthase [Ipomoea nil]638004035 (4)gb|ABB40579.2|3e-921-aminocyclopropane-1-carboxylate synthase [Ipomoea nil]
JMFF051A19Sequence635011657 (6)gb|ABB40579.2|3e-951-aminocyclopropane-1-carboxylate synthase [Ipomoea nil]

Alignment

This contig is upended


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JMFF051A19+                                    TCAAAACCAGGATAATATGGAGTGGGACCAAAAAT
                      ____________________________________________________________
consensus                                      TCAAAACCAGGATAATATGGAGTGGGACCAAAAAT
 
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JMFF020F11+                           CCAAACAGAAGGCCAGTGCTTCATGAGCTCCGGTGGCACCTCCG
JMFF021F23+                           CCAAACAGAAGGCCAGTATTTCATGAGCTCCGGTGGCACCTCCG
JMFF051A19+           GCTTCGCCGGGATTCACCAAACAGAAGGCCAGTGCTTCATGAGCTCCGGTGGCACCTCCG
                      ____________________________________________________________
consensus             GCTTCGCCGGGATTCACCAAACAGAAGGCCAGTGCTTCATGAGCTCCGGTGGCACCTCCG
 
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JMFF020F11+           CTCATAACGATCCTGTCGGGGTCGAATTTCACTGTGTCTCCCCTTACTTTCTCCATGAAT
JMFF002I22+                                                            TCTCCATGAAT
JMFF026G16+                               GTCGAATTTCACTGTGTCTCCCCTTACTTTCTCCATGAAT
JMFF021F23+           CTCATAACGATCCTATCCGGATCAAATTTCACTGTGTCTCCCCTCACTTTCTCCATGAAT
JMFF051A19+           CTCATAACGATCCTGTCGGGGTCGAATTTCACTGTGTCTCCCCTTACTTTCTCCATGAAT
                      ____________________________________________________________
consensus             CTCATAACGATCCTGTCGGGGTCGAATTTCACTGTGTCTCCCCTTACTTTCTCCATGAAT
 
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JMFF020F11+           CTTGCAACAGCACATCTAAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
JMFF002I22+           CTTGCAACAGCACATCTAAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
JMFF030G19+                                          CATGGTAGTCTTGATAAATAGCAATATCT
JMFF026G16+           CTTGCAACAGCACATCTAAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
JMFF021F23+           CTTGCCACAGCAGTTCTGAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
JMFF051A19+           CTTGCAACAGCACATCTAAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
                      ____________________________________________________________
consensus             CTTGCAACAGCACATCTAAATTCCGGCAATCCATGGTAGTCTTGATAAATAGCAATATCT
 
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JMFF020F11+           TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
JMFF002I22+           TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
JMFF030G19+           TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
JMFF026G16+           TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
JMFF021F23+           TTGAACTCTTCTGCCCCTTGGGGCGTACAAATGGAGGCTTTGGGGTTATTCAATACCCAG
JMFF051A19+           TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
                      ____________________________________________________________
consensus             TTAAACTCTTCTGCTCCTTGGGGCGTGCAAATGGAGGCTTTGGGGTTGTTCAACACCCAC
 
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JMFF020F11+           TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
JMFF002I22+           TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
JMFF030G19+           TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
JMFF026G16+           TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
JMFF021F23+           TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATCTGGATAACACCCTGA
JMFF051A19+           TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
                      ____________________________________________________________
consensus             TTCTTAATCAAATCAAAGCAGAGCTGGTTTTCTGCTAAGCCCATTTGGATAACACCCTGA
 
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JMFF020F11+           GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
JMFF002I22+           GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
JMFF030G19+           GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
JMFF026G16+           GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
JMFF021F23+           GGATTATGTTTGGGATGGAAAGGGTTATTATCATAAGCCTTCCAACCATCAAAGTAGGCC
JMFF051A19+           GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
                      ____________________________________________________________
consensus             GGATTATGTTTGGGATGGAAAGGGTCATTATCATAAGCCTTCCAACCATCAAAGTATGCA
 
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JMFF020F11+           GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
JMFF002I22+           GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
JMFF030G19+           GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
JMFF026G16+           GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
JMFF021F23+           GAGTTTTCTCCGTGTCCATCGTTGGTAGCAATTTTGGACAA                   
JMFF051A19+           GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
                      ____________________________________________________________
consensus             GAGTTTTCTCCGTGTCCATTGTTGGTAGCAATTTTGGACAAAACTTCTGTGTGTTTCATG
 
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JMFF020F11+           GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
JMFF002I22+           GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
JMFF030G19+           GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
JMFF026G16+           GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
JMFF051A19+           GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
                      ____________________________________________________________
consensus             GTCTTCAAATCCATATGATGATATGATGTGATGTTCAAAGAAGGATTCTGAAAAGAAAGA
 
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JMFF020F11+           AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
JMFF002I22+           AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
JMFF030G19+           AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
JMFF026G16+           AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
JMFF051A19+           AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
                      ____________________________________________________________
consensus             AAATGATGTGTTTTTCTCCTGCGTATGTAATTATATATGCTGAAATGACAATAAGTGTAT
 
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JMFF020F11+           GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGT      
JMFF002I22+           GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGT      
JMFF030G19+           GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGT      
JMFF026G16+           GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGT      
JMFF051A19+           GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGTGACCGG
                      ____________________________________________________________
consensus             GTTCAGGTTTTGGGTGAGATCGAGAGCGAGTATGTAGTAGAATGTTTTGTGTGTGACCGG