Contig 011654:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF040P03Sequence544011654 (4)ref|XP_011093833.1|9e-62PREDICTED: RING-box protein 1a [Sesamum indicum]715011654 (4)ref|XP_011093833.1|6e-61PREDICTED: RING-box protein 1a [Sesamum indicum]
JMFF050J08Sequence613011654 (4)ref|XP_011093833.1|2e-61PREDICTED: RING-box protein 1a [Sesamum indicum]549011654 (4)gb|EYU25848.1|3e-37hypothetical protein MIMGU_mgv1a022668mg, partial [Erythranthe guttata]

Alignment

This contig is upended


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rJMFF050J08-                                                                     A
                      ____________________________________________________________
consensus                                                                        A
 
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rJMFF050J08-          TTAACAAGGCGTGCACACCATTGCAATTTTATCAATAAATAGGCACGTAGGAATGCTGGA
rJMFF040P03-                                   ATTTTATCAATAAATAGGCACGTAGGAATGCTGGA
                      ____________________________________________________________
consensus             TTAACAAGGCGTGCACACCATTGCAATTTTATCAATAAATAGGCACGTAGGAATGCTGGA
 
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rJMFF050J08-          AAGCACAAAGAGCCAAATTGTGCCAAACTCTTACTTGGGGGTGGGGGGTTACTCTCTCTA
rJMFF040P03-          AAGCACAAAGTACCAAATTGTGCCAAACTCTTTGTTGGGGGTGGGGGGTTACTCTCTCTA
                      ____________________________________________________________
consensus             AAGCACAAAGTGCCAAATTGTGCCAAACTCTTTGTTGGGGGTGGGGGGTTACTCTCTCTA
 
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rJMFF050J08-          TTCACCTCAGGGGTTCACAAGTATTGACATCAGATAAGTGATCACTTAGATTTTGCAGCA
rJMFF040P03-          TTCACCTCAGGGGTTCACAAGTATTGACATCAGATAAGTGATCACTTAGATTTTGCAGCA
                      ____________________________________________________________
consensus             TTCACCTCAGGGGTTCACAAGTATTGACATCAGATAAGTGATCACTTAGATTTTGCAGCA
 
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rJMFF050J08-          AAATATAACTAACGAATCTCAATGGCATACATATTACATATCACAAACTAAGCAAACCAA
rJMFF040P03-          AAATATAACTAACGAATCTCAATGGCATACATATTACATATCACAAACTAAGCAAACCAA
JMFF040P03+                                                                 AACCAA
                      ____________________________________________________________
consensus             AAATATAACTAACGAATCTCAATGGCATACATATTACATATCACAAACTAAGCAAACCAA
 
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rJMFF050J08-          ATCCGCAATGCATGAGTTTAAATCATTTCAGCATTAAATGCTCCCATCATGCTCCGAATA
rJMFF040P03-          ATCCGCAATGCATGAGTTTAAATCATTTCAGCATTAAATGCTCCCATCATGCTCCGAATA
JMFF040P03+           ATCCGCAATGCATGAGTTTAAATCATTTCAGCATTAAATGCTCCCATCATGCTCCGAATA
                      ____________________________________________________________
consensus             ATCCGCAATGCATGAGTTTAAATCATTTCAGCATTAAATGCTCCCATCATGCTCCGAATA
 
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rJMFF050J08-          TAGTTTTTTGAACAGAGCAGAAGATTGGAAGTAGCTTCATTCACAAAGGATGCGGTTAGT
rJMFF040P03-          TAGTTTTTTGAACAGAGCAGAAGATTGGAAGTAGCTTCATTCACAAAGGATGCGGTTAGT
JMFF040P03+           TAGTTTTTTGAACAGAGCAGAAGATTGGAAGTAGCTTCATTCACAAAGGATGCGGTTAGT
                      ____________________________________________________________
consensus             TAGTTTTTTGAACAGAGCAGAAGATTGGAAGTAGCTTCATTCACAAAGGATGCGGTTAGT
 
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rJMFF050J08-          GACCATACTTCTGGAACTCCCACTCGCTATTGTCCAAGGGGCACACTTGACGAGTTTTGA
rJMFF040P03-          GACCATACTTCTGGAACTCCCACTCGCTATTGTCCAAGGGGCACACTTGACGAGTTTTGA
JMFF040P03+           GACCATACTTCTGGAACTCCCACTCGCTATTGTCCAAGGGGCACACTTGACGAGTTTTGA
JMFF050J08+                TACTTCTGGAACTCCCACTCGCTATTGTCCAAGGGGCACACTTGACGAGTTTTGA
                      ____________________________________________________________
consensus             GACCATACTTCTGGAACTCCCACTCGCTATTGTCCAAGGGGCACACTTGACGAGTTTTGA
 
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rJMFF050J08-          GCCATCGGCTGATGCAGTGGAAATGAAATGCATGGTTGCAAACTCCCCAAGCAACCGTGC
rJMFF040P03-          GCCATCGGCTGATGCAGTGGAAATGAAATGCATGGTTGCAAACTCCCCAAGCAACCGTGC
JMFF040P03+           GCCATCGGCTGATGCAGTGGAAATGAAATGCATGGTTGCAAACTCCCCAAGCAACCGTGC
JMFF050J08+           GCCATCGGCTGATGCAGTGGAAATGAAATGCATGGTTGCAAACTCCCCAAGCAACCGTGC
                      ____________________________________________________________
consensus             GCCATCGGCTGATGCAGTGGAAATGAAATGCATGGTTGCAAACTCCCCAAGCAACCGTGC
 
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rJMFF050J08-          ATTCCTCACTTGTTGCACTAGCTTGATTAGCTTGACACTCAATACAGAGATCCATAATGT
rJMFF040P03-          ATTCCTCACTTGTTGCACTAGCTTGATTAGCTTGACACTCAATACAGAGATCCATAATGT
JMFF040P03+           ATTCCTCACTTGTTGCACTAGCTTGATTAGCTTGACACTCAATACAGAGATCCATAATGT
JMFF050J08+           ATTCCTCACTTGTTGCACTAGCTTGATTAGCTTGACACTCAATACAGAGATCCATAATGT
                      ____________________________________________________________
consensus             ATTCCTCACTTGTTGCACTAGCTTGATTAGCTTGACACTCAATACAGAGATCCATAATGT
 
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rJMFF050J08-          GGTTCCTA                                                    
rJMFF040P03-          GGTTCCTACAAATTGCACAATTATCCACCACAATATCCCAGGCCCAAAGAGCAACGGCGT
JMFF040P03+           GGTTCCTACAAATTGCACAATTATCCACCACAATATCCCAGGCCCAAAGAGCAACGGCGT
JMFF050J08+           GGTTCCTACAAATTGCACAATTATCCACCACAATATCCCAGGCCCAAAGAGCAACGGCGT
                      ____________________________________________________________
consensus             GGTTCCTACAAATTGCACAATTATCCACCACAATATCCCAGGCCCAAAGAGCAACGGCGT
 
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rJMFF040P03-          TCCACTTTTTGATCTCGAATTTCTTCCCTTTCTT                          
JMFF040P03+           TCCACTTTTTGATCTCGAATTTCTTCCCTTTCTT                          
JMFF050J08+           TCCACTTTTTGATCTCGAATTTCTTCCCTTTCTTGGCCGAAGAGGAAGTCGACGCCACGG
                      ____________________________________________________________
consensus             TCCACTTTTTGATCTCGAATTTCTTCCCTTTCTTGGCCGAAGAGGAAGTCGACGCCACGG
 
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JMFF050J08+           AAGACGTCGCTCCGGCGCCGCCCTCGCCCTCGCCGGCCGGAACCATAGTCACATCGGTGT
                      ____________________________________________________________
consensus             AAGACGTCGCTCCGGCGCCGCCCTCGCCCTCGCCGGCCGGAACCATAGTCACATCGGTGT
 
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JMFF050J08+           CCAAGGATGCCATCTAATCAAAGCTAGGTTTCGGTTCCGATGATTCAATTGCTCTCCAGG
                      ____________________________________________________________
consensus             CCAAGGATGCCATCTAATCAAAGCTAGGTTTCGGTTCCGATGATTCAATTGCTCTCCAGG