Contig 011649:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF028A03Sequence463011649 (3)ref|XP_006355656.1|2e-32PREDICTED: coronatine-insensitive protein 1-like [Solanum tuberosum]
JMFF048M13Sequence397011649 (3)ref|XP_006355656.1|7e-21PREDICTED: coronatine-insensitive protein 1-like [Solanum tuberosum]522014925ref|XP_009787310.1|5e-21PREDICTED: coronatine-insensitive protein 1-like [Nicotiana sylvestris]
JMSF004N21Sequence250011649 (3)

Alignment

This contig is upended


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JMFF028A03+                      CCTGAGCGACTCCAGGAGAGAGAAGCGGCGGGCGAGCTGATCCGGGGAG
                      ____________________________________________________________
consensus                        CCTGAGCGACTCCAGGAGAGAGAAGCGGCGGGCGAGCTGATCCGGGGAG
 
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JMFF028A03+           GCGGTGTAGCAGAGGGCCATGGTCACGTGCTTCCGCGTGATGGCGTCGATCTCGAACCAC
JMFF048M13+                                  CACGTGCTTCCGCGTGATGGCGTCGATCTCGAACCAC
                      ____________________________________________________________
consensus             GCGGTGTAGCAGAGGGCCATGGTCACGTGCTTCCGCGTGATGGCGTCGATCTCGAACCAC
 
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JMFF028A03+           CTCTTGCACACCATNGACACCGCATCCCGGTCCCGCGATTCNTGGATGTAGGGTATCACG
JMFF048M13+           CTCTTGCACACCATNGACACCGCATCCCGGTCCCGCGATTCCTGGATGTAGGGTATCACG
                      ____________________________________________________________
consensus             CTCTTGCACACCATNGACACCGCATCCCGGTCCCGCGATTCCTGGATGTAGGGTATCACG
 
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JMFF028A03+           CACTCCCATACGGTGTCGTACGTGCTGCTCAGCCGTGTCCCACTCCTCTCCTCCATACTC
JMSF004N21+                                                           TCCTCCATACTC
JMFF048M13+           CACTCCCATACGGTGTCGTACGTGCTGCTCAGCCGTGTCCCACTCCTCTCCTCCATACTC
                      ____________________________________________________________
consensus             CACTCCCATACGGTGTCGTACGTGCTGCTCAGCCGTGTCCCACTCCTCTCCTCCATACTC
 
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JMFF028A03+           AACGCCCAACAATATATATATATAATTCCCTCCGAGAAACCACAAAACACCATCAAAACT
JMSF004N21+           AACGCCCAACAATATATATATATAATTCCCTCCGAGAAACCACAAAACACCATCAAAACT
JMFF048M13+           AACGCCCAACAATATATATATATAATTCCCTCCGAGAAACCACAAAACACCATCAAAACT
                      ____________________________________________________________
consensus             AACGCCCAACAATATATATATATAATTCCCTCCGAGAAACCACAAAACACCATCAAAACT
 
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JMFF028A03+           CCATCCGCGACCTCGAACACTATCCTCCCTGCCTCGCCATGGNTACGGCTCCAGAAAACG
JMSF004N21+           CCATCCGCGACCTCGAACACTATCNTCCCTGCCTCGCCATGGNTACGGCTCCAGAAAACG
JMFF048M13+           CCATCCGCGACCTCGAACACTATCCTCCCTGCCTCGCCATGGCTACGGCTCCAGAAAACG
                      ____________________________________________________________
consensus             CCATCCGCGACCTCGAACACTATCCTCCCTGCCTCGCCATGGCTACGGCTCCAGAAAACG
 
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JMFF028A03+           CGCGACGCCGGAAGTTCAACGGAGAGAGAAAGAGATCGAACGGCGACAGTTGATAAGCCG
JMSF004N21+           CGCGACGCCGGAAGTTCAACGGAGAGAGAAAGAGATCGAACGGCGACAGTTGATAAGCCG
JMFF048M13+           CGCGACGCCGGAAGTTCAACGGAGAGAGAAAGAGATCGAACGGCGACAGTTGATAAGCCG
                      ____________________________________________________________
consensus             CGCGACGCCGGAAGTTCAACGGAGAGAGAAAGAGATCGAACGGCGACAGTTGATAAGCCG
 
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JMFF028A03+           TTTGAGAGAGAGAGAGAGAGAGAGAGAGGGAGATAGAGATAGGAAAGGGGTCCC      
JMSF004N21+           TTTGAGAGAGAGAGAGAGAGAGAGAGAGGGAGATAGAGATAGGAAAGGGGTCCC      
JMFF048M13+           TTTGAGAGAGAGAGAGAGAGAGAGAGAGGGAGATAGAGATAGGAAAGGGGTCCCGATTCC
                      ____________________________________________________________
consensus             TTTGAGAGAGAGAGAGAGAGAGAGAGAGGGAGATAGAGATAGGAAAGGGGTCCCGATTCC