Contig 011648:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF048M01-                                        GGGACAAGAATATGACACTTTCATAACAAT
                      ____________________________________________________________
consensus                                           GGGACAAGAATATGACACTTTCATAACAAT
 
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rJMFF048M01-          AATAGTACAACCAAATCTTTGTTCTCTTGAAAGAATGGTGCAGTAACCAAAATGTCACAA
                      ____________________________________________________________
consensus             AATAGTACAACCAAATCTTTGTTCTCTTGAAAGAATGGTGCAGTAACCAAAATGTCACAA
 
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rJMFF048M01-          CACAGGAAATCCATCAAGAATGAACTAAAGTAAAAGCAAAAGACCATATATCTCTGGCCT
                      ____________________________________________________________
consensus             CACAGGAAATCCATCAAGAATGAACTAAAGTAAAAGCAAAAGACCATATATCTCTGGCCT
 
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rJMFF048M01-          TTTTTCATATGTTTCTGGGTAACAGCAGGGGCAAAACTAGGCCAATTGAGACGAGCAGCG
JMFN014O08+                CATATGTTTCTGGGTAACAGCAGGGGCAAAACTAGGCCAATTGAGACGAGCAGCG
JMFS169G07+                            GGTAACAGCAGGGGCAAAACTAGGCCAATTGAGACGAGCAGCG
                      ____________________________________________________________
consensus             TTTTTCATATGTTTCTGGGTAACAGCAGGGGCAAAACTAGGCCAATTGAGACGAGCAGCG
 
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rJMFF048M01-          AAACGAATGGAGTCTTCCACGATGGAGACGAGGAAGCGTGAAGTGGGCTCGAGCCGAAAG
JMFN014O08+           AAACGAATGGAGTCTTCGACGATGGAGACGAGGAAGCGTGAAGTGGGCTCGAGCCGAAAG
JMFS169G07+           AAACGAATGGAGTCTTCGACGATGGAGACGAGGAAGCGTGAAGTGGGCTCGAGCCGAAAG
                      ____________________________________________________________
consensus             AAACGAATGGAGTCTTCGACGATGGAGACGAGGAAGCGTGAAGTGGGCTCGAGCCGAAAG
 
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rJMFF048M01-          CATTAAAGGCAGAAGGTCCAGCA                                     
JMFN014O08+           CATTAGAGGCAGAAGGTCCAGCAGCTGCAGAAGAAGGAGCATAAGCTTCTGCAGTGGGTG
JMFS169G07+           CATTAGAGGCAGAAGGTCCAGCAGCTGCAGAAGAAGGAGCATAAGCTTCTGCAGTGGGTG
                      ____________________________________________________________
consensus             CATTAGAGGCAGAAGGTCCAGCAGCTGCAGAAGAAGGAGCATAAGCTTCTGCAGTGGGTG
 
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JMFN014O08+           GTGGAGCTGCATTATCATCATAGGTTGAAGATGTAAGGTTTCCTCCAGGCACAAAAATAT
JMFS169G07+           GTGGAGCTGCATTATCATCATAGGTTGAAGATGTAAGGTTTCCTCCAGGCACAAAAATAT
JMFF048M01+                   GCATTATCATCATAGGTTGAAGAGGTAAGGTTTCCTCCAGGCACAAAAATAT
                      ____________________________________________________________
consensus             GTGGAGCTGCATTATCATCATAGGTTGAAGATGTAAGGTTTCCTCCAGGCACAAAAATAT
 
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JMFN014O08+           GGAGTTTCTGTGATTTTTTACAGTGACCCTTTTTGGCACTGGTGAAGAAGAAGTCTCCAG
JMFS169G07+           GGAGTTTCTGTGATTTTTCACAGTGACCCTTTTTGGCACTGGTGAAGAAGAAGTCTCCAG
JMFF048M01+           GGAGTTTCTGTGATTTTTCACAGTGACCCTTTTTGGCACTGGTGAAGAAGAAGTCTCCAG
                      ____________________________________________________________
consensus             GGAGTTTCTGTGATTTTTCACAGTGACCCTTTTTGGCACTGGTGAAGAAGAAGTCTCCAG
 
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JMFN014O08+           GTGCTGTTATATTGAACAAGGAGTTGCCATTGTTCATGGACAAGATTGGATCATTGAGGT
JMFS169G07+           GTGCTGTTATATTGAACAAGGAGTTGCCATTGTTCATGGACAAGATTGGATCATTGAGGT
JMFF048M01+           GTGCTGTTATATTGAACAAGGAGTTGCCATTGTTCATGGACAAGATTGGATCATTGAGGT
                      ____________________________________________________________
consensus             GTGCTGTTATATTGAACAAGGAGTTGCCATTGTTCATGGACAAGATTGGATCATTGAGGT
 
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JMFN014O08+           TGCAGGCCCTGTAGGATTGAGCAGTGACTTGTATTACTGAATCTTGGCTTGGTGGGTACA
JMFS169G07+           TGCAGGCCCTGTAGGATTGAGCAGTGACTTGTATTACTGAATCTTGGCTTGGTGGGTACA
JMFF048M01+           TGCAGGCCCTGTAGGATTGAGCAGTGACTTGTATTACTGAATCTTGGCTTGGTGGGTACA
                      ____________________________________________________________
consensus             TGCAGGCCCTGTAGGATTGAGCAGTGACTTGTATTACTGAATCTTGGCTTGGTGGGTACA
 
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JMFN014O08+           AGAACAACAGTGAATCTCCAATCTTGAAAACATGATCCTTAGCCCATTTGGCATAGACTT
JMFS169G07+           AGAACAACAGTGAATCTCCAATCTTGAAAACATGATCCTTAGCCCATTTGGCATAGACTT
JMFF048M01+           AGAACAACAGTGAATCTCCAATCTTGAAAACATGATCCTTAGCCCATTTGGCATAGACTT
                      ____________________________________________________________
consensus             AGAACAACAGTGAATCTCCAATCTTGAAAACATGATCCTTAGCCCATTTGGCATAGACTT
 
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JMFN014O08+           TTGGATTTGCAGAGGAGGGGAGGTTCCAAGAATCCAAATCTCCAACCTTGTATTGGTAGC
JMFS169G07+           TTGGATTTGCAGAGGAGGGGAGGTTCCAAGAATCCAAATCTCCAACCTTGTATTGGTAGC
JMFF048M01+           TTGGATTTGCAGAGGAGGGGAGGTTCCAAGAATCCAAATCTCCAACCTTGTATTGGTAGC
                      ____________________________________________________________
consensus             TTGGATTTGCAGAGGAGGGGAGGTTCCAAGAATCCAAATCTCCAACCTTGTATTGGTAGC
 
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JMFN014O08+           AGAAGACTGAGGTGGTGGTCTGTATTAAGAGGAGGAGAAGGCACCAAAAATGGGAGTTTC
JMFS169G07+           AGAAGACTGAGGTGGTGGTCTGTATTAAGAGGAGGAGAAGGCACCAAAAATGGGAGTTTC
JMFF048M01+           AGAAGACTGAGGTGGTGGTCTGTATTAAGAGGAGGAGAAGGCACCAAAAATGGGAGTTTC
                      ____________________________________________________________
consensus             AGAAGACTGAGGTGGTGGTCTGTATTAAGAGGAGGAGAAGGCACCAAAAATGGGAGTTTC
 
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JMFN014O08+           TTGAAACCCTGAGATGAGTA                                        
JMFS169G07+           TTGAAACCCTGAGATGAGTAGCCATAGCCAT                             
JMFF048M01+           TTGAAACCCTGAGATGAGTAGCCATAGCCATAGCCATTAGCCAATCACCTTCTCTTCAGA
                      ____________________________________________________________
consensus             TTGAAACCCTGAGATGAGTAGCCATAGCCATAGCCATTAGCCAATCACCTTCTCTTCAGA