Contig 011644:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031J22Sequence562011644 (2)ref|XP_009769198.1|2e-43PREDICTED: probable protein phosphatase 2C 51 isoform X2 [Nicotiana sylvestris]772008415 (3)ref|XP_009612814.1|8e-86PREDICTED: probable protein phosphatase 2C 51 isoform X2 [Nicotiana tomentosifo
JMFF048I15Sequence567011644 (2)ref|XP_009769198.1|3e-37PREDICTED: probable protein phosphatase 2C 51 isoform X2 [Nicotiana sylvestris]513008415 (3)ref|XP_009612816.1|1e-40PREDICTED: probable protein phosphatase 2C 51 isoform X4 [Nicotiana tomentosifo

Alignment

This contig is upended


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JMFF031J22+                          TGGAGGAACAATTTCTTGTATGTGTTGAATACAACATGAAGGAAA
JMFF048I15+                                                   TGAATACAACATGAAGGAAA
                      ____________________________________________________________
consensus                            TGGAGGAACAATTTCTTGTATGTGTTGAATACAACATGAAGGAAA
 
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JMFF031J22+           AAGTAATCCAAAAACTTTTCTGAAGCCATCTTGCTTGCTTCCTTGCCCCCATGACCATCA
JMFF048I15+           AAGTAATCCAAAAACTTTTCTGAAGCCATCTTGCTTGCTTCCTGGCCCCCATGACCATCA
                      ____________________________________________________________
consensus             AAGTAATCCAAAAACTTTTCTGAAGCCATCTTGCTTGCTTCCTTGCCCCCATGACCATCA
 
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JMFF031J22+           AATACTGCCCCCACAGCAACACTGACATCTAAAACCGGAATTGTTACATTAGGATAGCAA
JMFF048I15+           AATACTGCCCCCACAGCAACACTGACATCTAAAACCGGAATTGTTACATTAGGATAGCAA
                      ____________________________________________________________
consensus             AATACTGCCCCCACAGCAACACTGACATCTAAAACCGGAATTGTTACATTAGGATAGCAA
 
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JMFF031J22+           ATAACACGGTCTTCCTGGTATTTCTTGTGGCCCTGAAGTGTAGCAAACTGGCAGCTCCCT
JMFF048I15+           ATAACACGGTCTTCCTGGTATTTCTTGTGGCCCTGAAGTGTAGCAAACTGGCAGCTCCCT
                      ____________________________________________________________
consensus             ATAACACGGTCTTCCTGGTATTTCTTGTGGCCCTGAAGTGTAGCAAACTGGCAGCTCCCT
 
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JMFF031J22+           TCTTTGAGTGCTTTCTTCTCAGGGGAAGCCAATAGAATCCATTGAGGGCATTCAGGCAAT
JMFF048I15+           TCTTTGAGTGCTTTCTTCTCAGGGGAAGCCAATAGAATCCATTGAGGGCATTCAGGCAAT
                      ____________________________________________________________
consensus             TCTTTGAGTGCTTTCTTCTCAGGGGAAGCCAATAGAATCCATTGAGGGCATTCAGGCAAT
 
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JMFF031J22+           CCAAAAAAGGCTGGAGCACCTCCTTCATCATAAGCTCTCATACAGGAAACAAACACATCG
JMFF048I15+           CCAAAAAAGGCTGGAGCACCTCCTTCATCATAAGCTCTCATACAGGAAACAAACACATCG
                      ____________________________________________________________
consensus             CCAAAAAAGGCTGGAGCACCTCCTTCATCATAAGCTCTCATACAGGAAACAAACACATCG
 
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JMFF031J22+           TGAGCATAGCCCGAGGCAGCAGAGAAAAACACTCCTACGAGAACTATGATCTTAAATCTG
JMFF048I15+           TGAGCATAGCCCGAGGCAGCAGAGAAAAACACTCCTACGAGAACTATGATCTTAAATCTG
                      ____________________________________________________________
consensus             TGAGCATAGCCCGAGGCAGCAGAGAAAAACACTCCTACGAGAACTATGATCTTAAATCTG
 
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JMFF031J22+           TCCATTATTCACTCCACACAAAATTAGGTTCCTGCAGAATTCCAAACTAGACATTAGGTT
JMFF048I15+           TCCATTATTCACTCCACACAAAATTAGGTTCCTGCAGAATTCCAAACTAGACATTAGGTT
                      ____________________________________________________________
consensus             TCCATTATTCACTCCACACAAAATTAGGTTCCTGCAGAATTCCAAACTAGACATTAGGTT
 
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JMFF031J22+           AGAGCTAAATCTGACGGCTTGATCGGCACGGCGTCCGGCGACATCCCTGATTTCGGAGTG
JMFF048I15+           AGAGCTAAATCTGACGGCTTGATCGGCACGGCGTCCGGCGACATCCCTGATTTCGGAGTG
                      ____________________________________________________________
consensus             AGAGCTAAATCTGACGGCTTGATCGGCACGGCGTCCGGCGACATCCCTGATTTCGGAGTG
 
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JMFF031J22+           AACTCGAGGGAAATGATCCTAACCGGAGAGGGAAAAT                       
JMFF048I15+           AACTCGAGGGAAATGATCCTAACCGGAGAGGGAAAATAAAATTGTCCGAAATCTATTCAT
                      ____________________________________________________________
consensus             AACTCGAGGGAAATGATCCTAACCGGAGAGGGAAAATAAAATTGTCCGAAATCTATTCAT