Contig 011640:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF048D08Sequence422011640 (4)ref|XP_004230320.1|176PREDICTED: uncharacterized protein LOC101253134 [Solanum lycopersicum]497011640 (4)ref|XP_006472224.1|58.9PREDICTED: uncharacterized protein LOC102628713 [Citrus sinensis]
JMFF048F06Sequence412011640 (4)ref|XP_004230320.1|180PREDICTED: uncharacterized protein LOC101253134 [Solanum lycopersicum]
JMFN043A19Sequence599011640 (4)ref|XP_004230320.1|157PREDICTED: uncharacterized protein LOC101253134 [Solanum lycopersicum]

Alignment

This contig is upended


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rJMFF048D08-                          AAAAAAAAAAACTGTTTCTGGGGTTTAAACCAAAAGTGACAATT
JMFN043A19+                                                       ACCAAAAGTGACAATT
                      ____________________________________________________________
consensus                             AAAAAAAAAAACTGTTTCTGGGGTTTAAACCAAAAGTGACAATT
 
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rJMFF048D08-          CTTGAAAAACCAAAATCCCAAGTAAAGCCAAAGCATGATGTCCAAAAGGGCATGCTTTCC
JMFN043A19+           CATGAAAAACCAGAATCACAAGTAAAGCCAAAGCATGATGTCCAATAGTGCATGCTTTCC
                      ____________________________________________________________
consensus             CTTGAAAAACCAGAATCCCAAGTAAAGCCAAAGCATGATGTCCAATAGTGCATGCTTTCC
 
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rJMFF048D08-          TTATCCAAATTTACTAAACAAAAGGGCTAAACTCCCTGAAAAACTTAAGCTCTTACTCCA
JMFN043A19+           TTATCCAGATTTACTAAACAAAAGGTCTAGACTCCCTGAATAACTTAAGCTCTTACTCGA
                      ____________________________________________________________
consensus             TTATCCAGATTTACTAAACAAAAGGTCTAGACTCCCTGAATAACTTAAGCTCTTACTCGA
 
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rJMFF048D08-          GCTCACAGGCGTAAATTTTACAAAGGGCATTCTTCAAAAAAATTTATGTTTGGGGGGGCC
JMFN043A19+           GCTCAGAGCAGTAAATATTACAAAGCGCATTCGTCAAATAAACTTATGTGTGGGGTGGCA
                      ____________________________________________________________
consensus             GCTCAGAGGCGTAAATTTTACAAAGGGCATTCTTCAAATAAATTTATGTTTGGGGTGGCC
 
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rJMFF048D08-          AGTTATCAAAAGCGTTGTTAGGATTTCCCAGGCTCCGCTCTAGGCCTCCA          
JMFN043A19+           AGTTATCGAAAGCGTTGTTAGGATTTCACAGGCTCCGCTCTAGGCCTCCATAGTCCCAGT
JMFF048F06+                   AAAGCGTTGTTAGGATTTCACAGGCTCCGCTCTAGGCCTCCATAGTCCCAGT
JMFF048D08+           AGTTATCGAAAGCGTTGTTAGGATTTCACAGGCTCCGCTTTAGGCCTCCATAGTCCCAGT
                      ____________________________________________________________
consensus             AGTTATCGAAAGCGTTGTTAGGATTTCACAGGCTCCGCTCTAGGCCTCCATAGTCCCAGT
 
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JMFN043A19+           CTATATTTGTGGGTGTATTTCAGTATTAGTTTCCTATGCTTTACGGGGATGCCAAGACGC
JMFF048F06+           CTATATTTGTGGGTGTATTTCAGTATTAGTTTCCTATGCTTTACGGGGATGCCAAGACGC
JMFF048D08+           CTATATTTGTGGGTGTATTTCAGTATTAGTTTCCTATGCTTTACGGGGATGCCAAGACGC
                      ____________________________________________________________
consensus             CTATATTTGTGGGTGTATTTCAGTATTAGTTTCCTATGCTTTACGGGGATGCCAAGACGC
 
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JMFN043A19+           TTGAGCCTAAGGGTTCGAGTAACCAGAAGCTTCTGGAAATCTCCGATCTCGGACTCAATC
JMFF048F06+           TTGAGCCCAAGGGTTCGAGTAACCAGAAGCTTCTGGAAATCTCCGATCTCGGACTCAATC
JMFF048D08+           TTGAGCCCAAGGGTTCGAGTAACCAGAAGCTTCTGGAAATCTCCGATCTCGGACTCAATC
                      ____________________________________________________________
consensus             TTGAGCCCAAGGGTTCGAGTAACCAGAAGCTTCTGGAAATCTCCGATCTCGGACTCAATC
 
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JMFN043A19+           TTTTCGGCATGGGTCTCTACCCCTTTCCCCACTCCGTTCAAGAACTCTGGAATCCCCACC
JMFF048F06+           TTTTCGGCATGGGTCTCTACCCCTTTCCCCACTCCGTTCAAGAACTCTGGAATCCCCACC
JMFF048D08+           TTTTCGGCATGGGTCTCTACCCCTTTCCCCACTCCGTTCAAGAACTCTGGAATCCCCACC
                      ____________________________________________________________
consensus             TTTTCGGCATGGGTCTCTACCCCTTTCCCCACTCCGTTCAAGAACTCTGGAATCCCCACC
 
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JMFN043A19+           TTCACTATGTACTGATTGGATTTGGAGGAGAAACTAGAAAACCCTGCGAAGGGTGACAGT
JMFF048F06+           TTCACTATGTACTGATTGGATTTGGAGGAGAAACTAGAAAACCCTGCGAAGGGTGACAGT
JMFF048D08+           TTCACTATGTACTGATTGGATTTGGAGGAGAAACTAGAAAACCCTGCGAAGGGTGACAGT
                      ____________________________________________________________
consensus             TTCACTATGTACTGATTGGATTTGGAGGAGAAACTAGAAAACCCTGCGAAGGGTGACAGT
 
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JMFN043A19+           GCAGCATTTGATGGTATAGGAAATCTTCTGTTGAGGGAAAAGAATTGCCTCCACGCCATG
JMFF048F06+           GCAGCATTTGATGGTATAGGAAATCTTCTGTTGAGGGAAAAGAATTGCCTCCACGCCATG
JMFF048D08+           GCAGCATTTGATGGTATAGGAAATCTTCTGTTGAGGGAAAAGAATGTCCTCCACGCCATG
                      ____________________________________________________________
consensus             GCAGCATTTGATGGTATAGGAAATCTTCTGTTGAGGGAAAAGAATTGCCTCCACGCCATG
 
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JMFN043A19+           GGAAGAAACTTCAATCTCTGTTCAGCACTCCTCTAGGTTT                    
JMFF048F06+           GGAAGAAACTTCAATCTCTTTTCAGCACTCCTCTAGGTTTTAACTTCAAAACCCTCCTAC
JMFF048D08+           GGAAGAAACTTCAATCTCTTTTCAGCACTCCTCTAGGTTTTAACTTCAAAACCCTCCTAC
                      ____________________________________________________________
consensus             GGAAGAAACTTCAATCTCTTTTCAGCACTCCTCTAGGTTTTAACTTCAAAACCCTCCTAC