Contig 011628:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045L19Sequence647011628 (2)ref|XP_010530051.1|2e-41PREDICTED: probable pectinesterase 68 [Tarenaya hassleriana]595017019gb|EYU33537.1|6e-78hypothetical protein MIMGU_mgv1a008469mg [Erythranthe guttata]
JMSF018K19Sequence264011628 (2)emb|CDP09966.1|3e-21unnamed protein product [Coffea canephora]629004086 (11)ref|XP_009628300.1|6e-83PREDICTED: signal recognition particle 54 kDa protein 2 [Nicotiana tomentosifor

Alignment

This contig is upended


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JMFF045L19+ CATTCCCGGCAGCGGCGCCGGCGCCGTATTCTTGAAGCTAATGTTTC
                      ____________________________________________________________
consensus CATTCCCGGCAGCGGCGCCGGCGCCGTATTCTTGAAGCTAATGTTTC
 
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JMFF045L19+ TGGCGGAGAAAAAGCTAGCAAACACCGTGACGGAAGCCGTNTGGTAAGTGCGGAGCTGCT
                      ____________________________________________________________
consensus TGGCGGAGAAAAAGCTAGCAAACACCGTGACGGAAGCCGTNTGGTAAGTGCGGAGCTGCT
 
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JMFF045L19+ GCCCATCTGGGCCGCGATCGCTTGCTCGGTCGTGCCATTCTATCCCGTCGTCTCCCTCCC
                      ____________________________________________________________
consensus GCCCATCTGGGCCGCGATCGCTTGCTCGGTCGTGCCATTCTATCCCGTCGTCTCCCTCCC
 
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JMSF018K19+ CCGGCACCACCACTTTCTCCACGTAGCA
JMFF045L19+ CGCGCCTTGAAACCTTATGTACGGTTTCGACGCCGGCACCACCACTTTCTCCACGTAGCA
                      ____________________________________________________________
consensus CGCGCCTTGAAACCTTATGTACGGTTTCGACGCCGGCACCACCACTTTCTCCACGTAGCA
 
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JMSF018K19+ ACCGGGACCGATTTGAATGAGGACGTTCATGCTATTGTGCTCCGGCACGGAATCAACGGC
JMFF045L19+ ACCGGGACCGATTTGAATGAGGACGTTCATGCTATTGTGCTCCGGCACGGAATCAACGGC
                      ____________________________________________________________
consensus ACCGGGACCGATTTGAATGAGGACGTTCATGCTATTGTGCTCCGGCACGGAATCAACGGC
 
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JMSF018K19+ GGCCTGAACAGAACGGAAGTCGCCGAAGCCGTCGAGGTCCACAAAGATGGTGCGGTTCCC
JMFF045L19+ GGCCTGAACAGAACGGAAGTCGCCGAAGCCGTCGAGGTCCACAAAGATGGTGCGGTTCCC
                      ____________________________________________________________
consensus GGCCTGAACAGAACGGAAGTCGCCGAAGCCGTCGAGGTCCACAAAGATGGTGCGGTTCCC
 
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JMSF018K19+ GGAGGGCCCCACCCAATGGTGCCCGTGCGTCCCGCTGCTAGAATTATTACTGGAACCGCC
JMFF045L19+ GGAGGGCCCCACCCAATGGTGCCCGTGCGTCCCGCTGCTAGAATTATTACTGGAACCGCC
                      ____________________________________________________________
consensus GGAGGGCCCCACCCAATGGTGCCCGTGCGTCCCGCTGCTAGAATTATTACTGGAACCGCC
 
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JMSF018K19+ GCAGCCGGCTGACGAGGGCGGCGGCGCCGATGGCGTTGCATGGAATAACGAGAAGA
JMFF045L19+ GCAGCCGGCTGACGAGGGCGGCGGCGCCGATGGCGTTGCATGGAATAACGAGAAGAATTG
                      ____________________________________________________________
consensus GCAGCCGGCTGACGAGGGCGGCGGCGCCGATGGCGTTGCATGGAATAACGAGAAGAATTG
 
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JMFF045L19+ CAGGAATAAGAAGAATAAGAAGAGAGGAGTGAGGGAATTCGCAGCCATGCAAGCAATGCA
                      ____________________________________________________________
consensus CAGGAATAAGAAGAATAAGAAGAGAGGAGTGAGGGAATTCGCAGCCATGCAAGCAATGCA
 
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JMFF045L19+ AATTGTAATGTAGAGAGAGAAAGAGAGAGAGAGAGTGAGGGGGAGGGTTTAATATAAATT
                      ____________________________________________________________
consensus AATTGTAATGTAGAGAGAGAAAGAGAGAGAGAGAGTGAGGGGGAGGGTTTAATATAAATT
 
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JMFF045L19+ TGCAGAAATGGAGTGAGGAATTTGCAGAATTTATAGTTGGGACGATACGTCGCAAATAAC
                      ____________________________________________________________
consensus TGCAGAAATGGAGTGAGGAATTTGCAGAATTTATAGTTGGGACGATACGTCGCAAATAAC