Contig 011628:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF045L19Sequence647011628 (2)ref|XP_010530051.1|2e-41PREDICTED: probable pectinesterase 68 [Tarenaya hassleriana]595017019gb|EYU33537.1|6e-78hypothetical protein MIMGU_mgv1a008469mg [Erythranthe guttata]
JMSF018K19Sequence264011628 (2)emb|CDP09966.1|3e-21unnamed protein product [Coffea canephora]629004086 (11)ref|XP_009628300.1|6e-83PREDICTED: signal recognition particle 54 kDa protein 2 [Nicotiana tomentosifor

Alignment

This contig is upended


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JMFF045L19+                        CATTCCCGGCAGCGGCGCCGGCGCCGTATTCTTGAAGCTAATGTTTC
                      ____________________________________________________________
consensus                          CATTCCCGGCAGCGGCGCCGGCGCCGTATTCTTGAAGCTAATGTTTC
 
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JMFF045L19+           TGGCGGAGAAAAAGCTAGCAAACACCGTGACGGAAGCCGTNTGGTAAGTGCGGAGCTGCT
                      ____________________________________________________________
consensus             TGGCGGAGAAAAAGCTAGCAAACACCGTGACGGAAGCCGTNTGGTAAGTGCGGAGCTGCT
 
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JMFF045L19+           GCCCATCTGGGCCGCGATCGCTTGCTCGGTCGTGCCATTCTATCCCGTCGTCTCCCTCCC
                      ____________________________________________________________
consensus             GCCCATCTGGGCCGCGATCGCTTGCTCGGTCGTGCCATTCTATCCCGTCGTCTCCCTCCC
 
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JMSF018K19+                                           CCGGCACCACCACTTTCTCCACGTAGCA
JMFF045L19+           CGCGCCTTGAAACCTTATGTACGGTTTCGACGCCGGCACCACCACTTTCTCCACGTAGCA
                      ____________________________________________________________
consensus             CGCGCCTTGAAACCTTATGTACGGTTTCGACGCCGGCACCACCACTTTCTCCACGTAGCA
 
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JMSF018K19+           ACCGGGACCGATTTGAATGAGGACGTTCATGCTATTGTGCTCCGGCACGGAATCAACGGC
JMFF045L19+           ACCGGGACCGATTTGAATGAGGACGTTCATGCTATTGTGCTCCGGCACGGAATCAACGGC
                      ____________________________________________________________
consensus             ACCGGGACCGATTTGAATGAGGACGTTCATGCTATTGTGCTCCGGCACGGAATCAACGGC
 
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JMSF018K19+           GGCCTGAACAGAACGGAAGTCGCCGAAGCCGTCGAGGTCCACAAAGATGGTGCGGTTCCC
JMFF045L19+           GGCCTGAACAGAACGGAAGTCGCCGAAGCCGTCGAGGTCCACAAAGATGGTGCGGTTCCC
                      ____________________________________________________________
consensus             GGCCTGAACAGAACGGAAGTCGCCGAAGCCGTCGAGGTCCACAAAGATGGTGCGGTTCCC
 
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JMSF018K19+           GGAGGGCCCCACCCAATGGTGCCCGTGCGTCCCGCTGCTAGAATTATTACTGGAACCGCC
JMFF045L19+           GGAGGGCCCCACCCAATGGTGCCCGTGCGTCCCGCTGCTAGAATTATTACTGGAACCGCC
                      ____________________________________________________________
consensus             GGAGGGCCCCACCCAATGGTGCCCGTGCGTCCCGCTGCTAGAATTATTACTGGAACCGCC
 
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JMSF018K19+           GCAGCCGGCTGACGAGGGCGGCGGCGCCGATGGCGTTGCATGGAATAACGAGAAGA    
JMFF045L19+           GCAGCCGGCTGACGAGGGCGGCGGCGCCGATGGCGTTGCATGGAATAACGAGAAGAATTG
                      ____________________________________________________________
consensus             GCAGCCGGCTGACGAGGGCGGCGGCGCCGATGGCGTTGCATGGAATAACGAGAAGAATTG
 
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JMFF045L19+           CAGGAATAAGAAGAATAAGAAGAGAGGAGTGAGGGAATTCGCAGCCATGCAAGCAATGCA
                      ____________________________________________________________
consensus             CAGGAATAAGAAGAATAAGAAGAGAGGAGTGAGGGAATTCGCAGCCATGCAAGCAATGCA
 
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JMFF045L19+           AATTGTAATGTAGAGAGAGAAAGAGAGAGAGAGAGTGAGGGGGAGGGTTTAATATAAATT
                      ____________________________________________________________
consensus             AATTGTAATGTAGAGAGAGAAAGAGAGAGAGAGAGTGAGGGGGAGGGTTTAATATAAATT
 
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JMFF045L19+           TGCAGAAATGGAGTGAGGAATTTGCAGAATTTATAGTTGGGACGATACGTCGCAAATAAC
                      ____________________________________________________________
consensus             TGCAGAAATGGAGTGAGGAATTTGCAGAATTTATAGTTGGGACGATACGTCGCAAATAAC