Contig 011625:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF045B05-                   CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTGACATAAATAT
                      ____________________________________________________________
consensus                      CCTTATGGCGGATCACCCTGGAGAGTTTTTTTTTTTTTTTGACATAAATAT
 
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JMFN013A24+                            AAATTAAATCCTTGTTTTGAAATTAACAATATAGTCCACACGA
rJMFF045B05-          ATATATGTAATTGTAATAAATTAAATCCTTGTTTTGAAATTAACAATATAGTCCACACGA
                      ____________________________________________________________
consensus             ATATATGTAATTGTAATAAATTAAATCCTTGTTTTGAAATTAACAATATAGTCCACACGA
 
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JMFN013A24+           AAACTTATTCCAAATTCATAAAAATGCACTCATTCGTGTACACATACATAATAAGCAATC
rJMFF045B05-          AAACTTATTCCAAATTCATAAAAATGCACTCATTCGTGTACACATACATAATAAGCAATC
JMFF045B05+                  TTCCAAATTCATAAAAATGCACTCATTCGTGTACACATACATAATAAGCAATC
                      ____________________________________________________________
consensus             AAACTTATTCCAAATTCATAAAAATGCACTCATTCGTGTACACATACATAATAAGCAATC
 
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JMFN013A24+           AATCTCGTCTTGCTCCGATCCAACTCGGTTGTGTCTTCTCTACACAACAGTTGAGATGGA
rJMFF045B05-          AATCTCGTCTTGCTCCGATCCAACTCGGTTGTGTCTTCTCTACACAACAGTTGAGATGGA
JMFF045B05+           AATCTCGTCTTGCTCCGATCCAACTCGGTTGTGTCTTCTCTACACAACAGTTGAGATGGA
                      ____________________________________________________________
consensus             AATCTCGTCTTGCTCCGATCCAACTCGGTTGTGTCTTCTCTACACAACAGTTGAGATGGA
 
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JMFN013A24+           CGCAGCATTATTGCAGTGATTGAAGCCATACCACACTCCTCTGGGCACAAATCTGTTGTA
rJMFF045B05-          CGCAGCATTATTGCAGTGATTGAAGCCATACCACACTCCTCTGGGCACAAATCTGTTGTA
JMFF045B05+           CGCAGCATTATTGCAGTGATTGAAGCCATACCACACTCCTCTGGGCACAAATCTGTTGTA
                      ____________________________________________________________
consensus             CGCAGCATTATTGCAGTGATTGAAGCCATACCACACTCCTCTGGGCACAAATCTGTTGTA
 
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JMFN013A24+           TGTAAACGTAACATAATTGCGAGCAGAGATGTACACAGTCACCGTCTGCGGTTTCCAGCC
rJMFF045B05-          TGTAAACGTAACATAATTGCGAGCAGAGATGTACACAGTCACCGTCTGCGGTTTCCAGCC
JMFF045B05+           TGTAAACGTAACATAATTGCGAGCAGAGATGTACACAGTCACCGTCTGCGGTTTCCAGCC
                      ____________________________________________________________
consensus             TGTAAACGTAACATAATTGCGAGCAGAGATGTACACAGTCACCGTCTGCGGTTTCCAGCC
 
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JMFN013A24+           GTCCGATCCCACCCTGTATAGATACAGATAACACACCTGATCCATGCATGGCCCCCTAAT
rJMFF045B05-          GTCCGATCCCACCCTGTATAGATACAGATAACACACCTGATCCATGCATGGCCCCCTAAT
JMFF045B05+           GTCCGATCCCACCCTGTATAGATACAGATAACACACCTGATCCATGCATGGCCCCCTAAT
                      ____________________________________________________________
consensus             GTCCGATCCCACCCTGTATAGATACAGATAACACACCTGATCCATGCATGGCCCCCTAAT
 
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JMFN013A24+           CTTGAATGTATCCTTGGAGCATCTCTCGAATGTGTCCGAATCTGGGTCGTCAATTCTTGC
rJMFF045B05-          CTTGAATGTATCCTTGGAGCATCTCTCGAATGTGTCCGAATCTGGGTCGTCAATTCTTGC
JMFF045B05+           CTTGAATGTATCCTTGGAGCATCTCTCGAATGTGTCCGAATCTGGGTCGTCAATTCTTGC
                      ____________________________________________________________
consensus             CTTGAATGTATCCTTGGAGCATCTCTCGAATGTGTCCGAATCTGGGTCGTCAATTCTTGC
 
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JMFN013A24+           TGCATATACCTCATTGCCATAAGCATCACCAAATGAAAGGCTGATTTGATCTCTAGTGTA
rJMFF045B05-          TGCATATACCTCATTGCCATAAGCATCACCAAATGAAAGGCTGATTTGATCTCTAGTGTA
JMFF045B05+           TGCATATACCTCATTGCCATAAGCATCACCAAATGAAAGGCTGATTTGATCTCTAGTGTA
                      ____________________________________________________________
consensus             TGCATATACCTCATTGCCATAAGCATCACCAAATGAAAGGCTGATTTGATCTCTAGTGTA
 
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JMFN013A24+           TTTTACTGAGGAACAGCTTGTTCTGATGTCCACTGTGTATGAACACTGGGCTGCACCAAT
rJMFF045B05-          TTTTACTGAGGAACAGCTTGTTCTGATGTCCACTGTGTATGAACACTGGGCTGCACCAAT
JMFF045B05+           TTTTACTGAGGAACAGCTTGTTCTGATGTCCACTGTGTATGAACACTGGGCTGCACCAAT
                      ____________________________________________________________
consensus             TTTTACTGAGGAACAGCTTGTTCTGATGTCCACTGTGTATGAACACTGGGCTGCACCAAT
 
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JMFN013A24+           CTGTGGGTTGGCTTTGACAGTGAAAGACCTGTTAAAGTGGG                   
rJMFF045B05-          CTGTGGGTTGGCTTTGACAGTGAAAGACCTGTTAAAGTGGGGCAGTTCTGAAACATCTCT
JMFF045B05+           CTGTGGGTTGGCTTTGACAGTGAAAGACCTGTTAAAGTGGGGCAGTTCTGAAACATCTCT
                      ____________________________________________________________
consensus             CTGTGGGTTGGCTTTGACAGTGAAAGACCTGTTAAAGTGGGGCAGTTCTGAAACATCTCT
 
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rJMFF045B05-          TGA                                                         
JMFF045B05+           TGAAGCTGTAGATGTGGTGAAGAAGAAGAAGAAGAAGAAGAAGGCAAGAAGGAGAAGTAT
                      ____________________________________________________________
consensus             TGAAGCTGTAGATGTGGTGAAGAAGAAGAAGAAGAAGAAGAAGGCAAGAAGGAGAAGTAT
 
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JMFF045B05+           TGAGAGCTTTCCACCCATTTTCATGGCTGCTTCAAATCCACCTATTAGACGATGACTGAT
                      ____________________________________________________________
consensus             TGAGAGCTTTCCACCCATTTTCATGGCTGCTTCAAATCCACCTATTAGACGATGACTGAT