| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF002E06 | Sequence | 460 | 011616 (6) | ref|XP_006350186.1| | 2e-57 | PREDICTED: serine carboxypeptidase-like 18-like isoform X2 [Solanum tuberosum] | |||||
| JMFF012A21 | Sequence | 581 | 011616 (6) | ref|XP_006350186.1| | 2e-79 | PREDICTED: serine carboxypeptidase-like 18-like isoform X2 [Solanum tuberosum] | 785 | 013785 (6) | gb|AAF64227.1|AF248647_1 | 8e-84 | glucose acyltransferase [Solanum pennellii] |
| JMFF020E20 | Sequence | 586 | 011616 (6) | ref|XP_006350186.1| | 1e-79 | PREDICTED: serine carboxypeptidase-like 18-like isoform X2 [Solanum tuberosum] | 682 | 013785 (6) | gb|AAF64227.1|AF248647_1 | 5e-69 | glucose acyltransferase [Solanum pennellii] |
| JMFF039P04 | Sequence | 652 | 011616 (6) | ref|XP_006350186.1| | 6e-91 | PREDICTED: serine carboxypeptidase-like 18-like isoform X2 [Solanum tuberosum] | 738 | 013785 (6) | gb|AAF64227.1|AF248647_1 | 8e-69 | glucose acyltransferase [Solanum pennellii] |
| JMFF043M12 | Sequence | 653 | 011616 (6) | ref|XP_006350186.1| | 6e-91 | PREDICTED: serine carboxypeptidase-like 18-like isoform X2 [Solanum tuberosum] | 338 | 013785 (6) | ref|XP_008236457.1| | 9e-12 | PREDICTED: putative serine carboxypeptidase-like 52 [Prunus mume] |
| JMFS132A12 | Sequence | 633 | 011616 (6) | ref|XP_006350186.1| | 1e-96 | PREDICTED: serine carboxypeptidase-like 18-like isoform X2 [Solanum tuberosum] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS132A12+ AATCGGTGAGTCAATGGATTGCC
____________________________________________________________
consensus AATCGGTGAGTCAATGGATTGCC
. : . : . : . : . : . :
JMFS132A12+ TTCTATATACCCTTTCATATTTAGTCGCGGCTCAATTCCAGATTCTAAACCATCATATAT
JMFF039P04+ ACCCTTTCATATTTAGTCGCGGCTCAATTCCAGATTCTAAACCATCATATAT
JMFF043M12+ ACCCTTTCATATTTAGTCGCGGCTCAATTCCAGATTCTAAACCATCATATAT
____________________________________________________________
consensus TTCTATATACCCTTTCATATTTAGTCGCGGCTCAATTCCAGATTCTAAACCATCATATAT
. : . : . : . : . : . :
JMFS132A12+ ATTGCGAACGACGAGTGGAACAGTGATTCCAGAATAGGAATCTCCAGCAACATAGAGTGG
JMFF039P04+ ATTGCGAACGACGAGTGGAACAGTGATTCCAGAATAGGAATCTCCAGCAACATAGAGTGG
JMFF020E20+ AGTGGAACAGTGATTCCAGAATAGGAATCTCCAGCAACATAGAGTGG
JMFF012A21+ AACAGTGATTCCAGAATAGGAATCTCCAGCAACATAGAGTGG
JMFF043M12+ ATTGCGAACGACGAGTGGAACAGTGATTCCAGAATAGGAATCTCCAGCAACATAGAGTGG
____________________________________________________________
consensus ATTGCGAACGACGAGTGGAACAGTGATTCCAGAATAGGAATCTCCAGCAACATAGAGTGG
. : . : . : . : . : . :
JMFS132A12+ ATTGTTAAGGAATGTAGGATGGTCCAGGAGCCACTGTACGAGGAAACTATAAGTATGTTG
JMFF039P04+ ATTGTTAAGGAATGTAGGATGGTCCAGGAGCCACTGTACGAGGAAACTATAAGTATGTTG
JMFF020E20+ ATTGTTAAGGAATGTAGGATGGTCCAGGAGCCACTGTACGAGGAAACTATAAGTATGTTG
JMFF012A21+ ATTGTTAAGGAATGTAGGATGGTCCAGGAGCCACTGTACGAGGAAACTATAAGTATGTTG
JMFF043M12+ ATTGTTAAGGAATGTAGGATGGTCCAGGAGCCACTGTACGAGGAAACTATAAGTATGTTG
____________________________________________________________
consensus ATTGTTAAGGAATGTAGGATGGTCCAGGAGCCACTGTACGAGGAAACTATAAGTATGTTG
. : . : . : . : . : . :
JMFS132A12+ TGCAGATAAAGTATCATTAGTGTTGTAAGCATCTGATGTTTCTGAATAGGAATATCCAGT
JMFF039P04+ TGCAGATAAAGTATCATTAGTGTTGTAAGCATCTGATGTTTCTGAATAGGAATATCCAGT
JMFF002E06+ GTGTTGTAAGCATCNGATGTTTCTGAATAGGAATATCCAGT
JMFF020E20+ TGCAGATAAAGTATCATTAGTGTTGTAAGCATCTGATGTTTCTGAATAGGAATATCCAGT
JMFF012A21+ TGCAGATAAAGTATCATTAGTGTTGTAAGCATNTGATGTTTCTGAATAGGAATATCCAGT
JMFF043M12+ TGCAGATAAAGTATCATTAGTGTTGTAAGCATCTGATGTTTCTGAATAGGAATATCCAGT
____________________________________________________________
consensus TGCAGATAAAGTATCATTAGTGTTGTAAGCATCTGATGTTTCTGAATAGGAATATCCAGT
. : . : . : . : . : . :
JMFS132A12+ TCCAACTGGTTGATCCACAAATATGATGTTGGCCACCTTGGTCCATGCATAGGGGTTCAA
JMFF039P04+ TCCAACTGGTTGATCCACAAATATGATGTTGGCCACCTTGGTCCATGCATAGGGGTTCAA
JMFF002E06+ TCCAACTGGTTGATCCACAAATATGATGTTGGCCACCTTGGTCCATGCATAGGGGTTCAA
JMFF020E20+ TCCAACTGGTTGATCCACAAATATGATGTTGGCCACCTTGGTCCATGCATAGGGGTTCAA
JMFF012A21+ TCCAACTGGTTGATCCACAAATATGATGTTGGCCACCTTGGTCCATGCATAGGGGTTCAA
JMFF043M12+ TCCAACTGGTTGATCCACAAATATGATGTTGGCCACCTTGGTCCATGCATAGGGGTTCAA
____________________________________________________________
consensus TCCAACTGGTTGATCCACAAATATGATGTTGGCCACCTTGGTCCATGCATAGGGGTTCAA
. : . : . : . : . : . :
JMFS132A12+ CTCCAAATCTGGGATGTCCCCAGTGGAATTTGCATAGTTAATGGTCAAAGGACCAATTTC
JMFF039P04+ CTCCAAATCTGGGATGTCCCCAGTGGAATTTGCATAGTTAATGGTCAAAGGACCAATTTC
JMFF002E06+ CTCCAAATCTGGGATGTCCCCAGTGGAATTTGCATAGTTAATGGTCAAAGGACCAATTTC
JMFF020E20+ CTCCAAATCTGGGATGTCCCCAGTGGAATTTGCATAGTTAATGGTCAAAGGACCAATTTC
JMFF012A21+ CTCCAAATCTGGGATGTCCCCAGTGGAATTTGCATAGTTAATGGTCAAAGGACCAATTTC
JMFF043M12+ CTCCAAATCTGGGATGTCCCCAGTGGAATTTGCATAGTTAATGGTCAAAGGACCAATTTC
____________________________________________________________
consensus CTCCAAATCTGGGATGTCCCCAGTGGAATTTGCATAGTTAATGGTCAAAGGACCAATTTC
. : . : . : . : . : . :
JMFS132A12+ AAAGAAGAAGGCAGAGAGTCCAGAGCAACCTGGACCACCAGTGAGCCATAGCAAGAGTGG
JMFF039P04+ AAAGAAGAAGGCAGAGAGTCCAGAGCAACCTGGACCACCAGTGAGCCATAGCAAGAGTGG
JMFF002E06+ AAAGAAGAAGGCAGAGAGTCCAGAGCAACCTGGACCACCAGTGAGCCATAGCAAGAGTGG
JMFF020E20+ AAAGAAGAAGGCAGAGAGTCCAGAGCAACCTGGACCACCAGTGAGCCATAGCAAGAGTGG
JMFF012A21+ AAAGAAGAAGGCAGAGAGTCCAGAGCAACCTGGACCACCAGTGAGCCATAGCAAGAGTGG
JMFF043M12+ AAAGAAGAAGGCAGAGAGTCCAGAGCAACCTGGACCACCAGTGAGCCATAGCAAGAGTGG
____________________________________________________________
consensus AAAGAAGAAGGCAGAGAGTCCAGAGCAACCTGGACCACCAGTGAGCCATAGCAAGAGTGG
. : . : . : . : . : . :
JMFS132A12+ ATCAGTTTCTGGGCTCTTCTCAGATTCAATGAAATAGTAAAACAGTTGAATTTCTTGAGA
JMFF039P04+ ATCAGTTTCTGGGCTCTTCTCAGATTCAATGAAATAGTAAAACAGTTGAATTTCTTGAGA
JMFF002E06+ ATCAGTTTCTGGGCTCTTCTCAGATTCAATGAAATAGTAAAACAGTTGAATTTCTTGAGA
JMFF020E20+ ATCAGTTTCTGGGCTCTTCTCAGATTCAATGAAATAGTAAAACAGTTGAATTTCTTGAGA
JMFF012A21+ ATCAGTTTCTGGGCTCTTCTCAGATTCAATGAAATAGTAAAACAGTTGAATTTCTTGAGA
JMFF043M12+ ATCAGTTTCTGGGCTCTTCTCAGATTCAATGAAATAGTAAAACAGTTGAATTTCTTGAGA
____________________________________________________________
consensus ATCAGTTTCTGGGCTCTTCTCAGATTCAATGAAATAGTAAAACAGTTGAATTTCTTGAGA
. : . : . : . : . : . :
JMFS132A12+ TTCTCCCACACCTATGTAACCAGTATGGAGTTTGAATGGAAGTTTTGCTGGGAAACCAGG
JMFF039P04+ TTCTCCCACACCTATGTAACCAGTATGGAGTTTGAATGGAAGTTTTGCTGGGAAACCAGG
JMFF002E06+ TTCTCCCACACCTATGTAACCAGTATGGAGTTTGAATGGAAGTTTTGCTGGGAAACCAGG
JMFF020E20+ TTCTCCCACACCTATGTAACCAGTATGGAGTTTGAATGGAAGTTTTGCTGGGAAACCAGG
JMFF012A21+ TTCTCCCACACCTATGTAACCAGTATGGAGTTTGAATGGAAGTTTTGCTGGGAAACCAGG
JMFF043M12+ TTCTCCCACACCTATGTAACCAGTATGGAGTTTGAATGGAAGTTTTGCTGGGAAACCAGG
____________________________________________________________
consensus TTCTCCCACACCTATGTAACCAGTATGGAGTTTGAATGGAAGTTTTGCTGGGAAACCAGG
. : . : . : . : . : . :
JMFS132A12+ CAGAGTTTCAACCACCGCATGTAAAAACGTTGGAGCCAAAAACAGTAGCAGAAACGTCGA
JMFF039P04+ CAGAGTTTCAACCACCGCATGTAAAAACGTTGGAGCCAAAAACAGTAGCAGAAACGTCGA
JMFF002E06+ CAGAGTTTCAACCACCGCATGTAAAAACGTTGGAGCCAAAAACAGTAGCAGAAACGTCGA
JMFF020E20+ CAGAGTTTCAACCACCGCATGTAAAAACGTTGGAGCCAAAAACAGTAGCAGAAACGTCGA
JMFF012A21+ CAGAGTTTCAACCACCGCATGTAAAAACGTTGGAGCCAAAAACAGTAGCAGAAACGTCGA
JMFF043M12+ CAGAGTTTCAACCACCGCATGTAAAAACGTTGGAGCCAAAAACAGTAGCAGAAACGTCGA
____________________________________________________________
consensus CAGAGTTTCAACCACCGCATGTAAAAACGTTGGAGCCAAAAACAGTAGCAGAAACGTCGA
. : . : . : . : . : . :
JMFS132A12+ CGCAAGGATT
JMFF039P04+ CGCAAGGATTTTGAATGTTGAGGCCATGACGACAAAGGCTTATCCAGCTAGCCTACAC
JMFF002E06+ CGCAAGGATTTTGAATGTTGAGGCCATGACGACAAAGGCTTATCCAGCTAGCCTACAC
JMFF020E20+ CGCAAGGATTTTGAATGTTGAGGCCATGACGACAAAGGCTTATCCAGCTAGCCTACAC
JMFF012A21+ CGCAAGGATTTTGAATGTTGAGGCCATGACGACAAAGGCTTATCCAGCTAGCCTACAC
JMFF043M12+ CGCAAGGATTTTGAATGTTGAGGCCATGACGACAAAGGCTTATCCAGCTAGCCTACACTC
____________________________________________________________
consensus CGCAAGGATTTTGAATGTTGAGGCCATGACGACAAAGGCTTATCCAGCTAGCCTACACTC