Contig 011610:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF042D11Sequence645011610 (2)gb|KJB65838.1|1e-87hypothetical protein B456_010G115800 [Gossypium raimondii]640011610 (2)ref|XP_002515495.1|2e-38Adenine phosphoribosyltransferase, putative [Ricinus communis] gb|EEF46944.1| Ad

Alignment

This contig is upended


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rJMFF042D11-               ACCCTGGAGAGTTTTTTTTTTTTTTTAGTCAAATATTTAATTTTATTAATACGGC
                      ____________________________________________________________
consensus                  ACCCTGGAGAGTTTTTTTTTTTTTTTAGTCAAATATTTAATTTTATTAATACGGC
 
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rJMFF042D11-          AGTTGGATTTGGTGAGAATAATGAAGATGATGATGAGATGGATGTTGGTCCGTACATGTT
                      ____________________________________________________________
consensus             AGTTGGATTTGGTGAGAATAATGAAGATGATGATGAGATGGATGTTGGTCCGTACATGTT
 
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rJMFF042D11-          ATTACAAAGAGACAATATTCCTATTTGCGAATTGAAATCAATTGTCCCAGCAAGTGACAC
                      ____________________________________________________________
consensus             ATTACAAAGAGACAATATTCCTATTTGCGAATTGAAATCAATTGTCCCAGCAAGTGACAC
 
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rJMFF042D11-          ATCAAAACACTCACTCAGATCAATATCAAATACCTACCCTTTTCTTTATCCCATCTTCCT
                      ____________________________________________________________
consensus             ATCAAAACACTCACTCAGATCAATATCAAATACCTACCCTTTTCTTTATCCCATCTTCCT
 
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rJMFF042D11-          CATTTTTAATGTTCCTCTCAAAAGCCTCTTACACTTCCATGGAAAACACCACACGAGGTA
                      ____________________________________________________________
consensus             CATTTTTAATGTTCCTCTCAAAAGCCTCTTACACTTCCATGGAAAACACCACACGAGGTA
 
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rJMFF042D11-          GAGTTTGAGATGATCCAAGTTGAAGTAAACGAGGCTATCGCAATTCCCATGATCGATCGG
JMFF042D11+                                         GAGGCTATCGCAATTCCCATGATCGATCGG
                      ____________________________________________________________
consensus             GAGTTTGAGATGATCCAAGTTGAAGTAAACGAGGCTATCGCAATTCCCATGATCGATCGG
 
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rJMFF042D11-          TCTTGATAGATGGATGGATCACAACATTTGGCATTTGCTAGGCTCGACGAGGATATACAG
JMFF042D11+           TCTGNATAGATGGATGGATCACAACATTTGGCATNTGCTAGGCTCGACGAGGATATACAG
                      ____________________________________________________________
consensus             TCTTGATAGATGGATGGATCACAACATTTGGCATTTGCTAGGCTCGACGAGGATATACAG
 
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rJMFF042D11-          AGGTTTCCCATTCAGCAATCGTGCTTTCTTAACCTCAGGCAAGCCAACGACGCATGCACA
JMFF042D11+           AGGTTTCCCATTCAGCAATCGTGCTTTCTTAACCTCAGGCAAGCCAACGACGCATGCACA
                      ____________________________________________________________
consensus             AGGTTTCCCATTCAGCAATCGTGCTTTCTTAACCTCAGGCAAGCCAACGACGCATGCACA
 
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rJMFF042D11-          TTCAATTACCTCAGCTCCAACGCGTTCCAAAAGCCTTATAGCTGCAGACAGGGTCCCTCC
JMFF042D11+           TTCAATTACCTCAGCTCCAACGCGTTCCAAAAGCCTTATAGCTGCAGACAGGGTCCCTCC
                      ____________________________________________________________
consensus             TTCAATTACCTCAGCTCCAACGCGTTCCAAAAGCCTTATAGCTGCAGACAGGGTCCCTCC
 
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rJMFF042D11-          TGTAGCCACTAAATCGTCGATGATCAATGCTCGTTCTCCTCGCTCAACACCACCAGTATG
JMFF042D11+           TGTAGCCACTAAATCGTCGATGATCAATGCTCGTTCTCCTCGCTCAACACCACCAGTATG
                      ____________________________________________________________
consensus             TGTAGCCACTAAATCGTCGATGATCAATGCTCGTTCTCCTCGCTCAACACCACCAGTATG
 
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rJMFF042D11-          CATCTCTAAGCAGTCGTTACCGTATTCAAGCACATATGCCTCTGA               
JMFF042D11+           CATCTCTAAGCAGTCGTTACCGTATTCAAGCACATATGCCTCTGATATAACTTCTCCGGC
                      ____________________________________________________________
consensus             CATCTCTAAGCAGTCGTTACCGTATTCAAGCACATATGCCTCTGATATAACTTCTCCGGC
 
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JMFF042D11+           AACAACAGAGATGTTCATGTGCCTGTATCGATCAACAAAGATGTCAATAGTATCCTTAAA
                      ____________________________________________________________
consensus             AACAACAGAGATGTTCATGTGCCTGTATCGATCAACAAAGATGTCAATAGTATCCTTAAA
 
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JMFF042D11+           GGCCTTATGATCCAACAATAGTGTCGTTATGTCCTGGAACATTATTCCTCGTTTTGGGAA
                      ____________________________________________________________
consensus             GGCCTTATGATCCAACAATAGTGTCGTTATGTCCTGGAACATTATTCCTCGTTTTGGGAA
 
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JMFF042D11+           ATGAGGAACAACTCTGATAGCATCAGAAATGCCCTTCAGTCTCGGGTCTCCTTGCAAACC
                      ____________________________________________________________
consensus             ATGAGGAACAACTCTGATAGCATCAGAAATGCCCTTCAGTCTCGGGTCTCCTTGCAAACC
 
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JMFF042D11+           ATTCTCTCCGGCGAACATTTTCTCTCTCTAGACCCAACACTATATATGGAAGGAAGGAAG
                      ____________________________________________________________
consensus             ATTCTCTCCGGCGAACATTTTCTCTCTCTAGACCCAACACTATATATGGAAGGAAGGAAG
 
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JMFF042D11+           ATGAGTTGCAGCTTTGCAGGGATAGTGAGAGAGTGAGAGAGTGAGAGAGAGTGTGTGTTC
                      ____________________________________________________________
consensus             ATGAGTTGCAGCTTTGCAGGGATAGTGAGAGAGTGAGAGAGTGAGAGAGAGTGTGTGTTC