Contig 011604:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025L19Sequence586011604 (15)ref|XP_009789243.1|1e-91PREDICTED: aldehyde dehydrogenase family 7 member B4 [Nicotiana sylvestris] ref636011604 (15)gb|KJB67101.1|2e-55hypothetical protein B456_010G174800 [Gossypium raimondii] gb|KJB67102.1| hypoth
JMFF030B15Sequence368011604 (15)ref|XP_009789243.1|8e-39PREDICTED: aldehyde dehydrogenase family 7 member B4 [Nicotiana sylvestris] ref756011604 (15)ref|XP_010261826.1|3e-78PREDICTED: aldehyde dehydrogenase family 7 member A1 [Nelumbo nucifera] ref|XP_
JMFF041C02Sequence644011604 (15)ref|XP_009789243.1|3e-103PREDICTED: aldehyde dehydrogenase family 7 member B4 [Nicotiana sylvestris] ref596011604 (15)gb|AFA36500.1|4e-51aldehyde dehydrogenase 7b, partial [Lolium perenne]
JMFS078F02Sequence632011604 (15)emb|CDP20508.1|5e-130unnamed protein product [Coffea canephora]
JMFS110D08Sequence624011604 (15)ref|XP_009789243.1|6e-112PREDICTED: aldehyde dehydrogenase family 7 member B4 [Nicotiana sylvestris] ref
JMSF020C02Sequence669007407 (31)ref|XP_011092178.1|7e-112PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Se717011604 (15)ref|XP_010261826.1|6e-75PREDICTED: aldehyde dehydrogenase family 7 member A1 [Nelumbo nucifera] ref|XP_
JMSF042G15Sequence812011604 (15)ref|XP_009615163.1|2e-147PREDICTED: aldehyde dehydrogenase family 7 member B4 [Nicotiana tomentosiformis612011604 (15)gb|AFA36500.1|6e-47aldehyde dehydrogenase 7b, partial [Lolium perenne]
JMSF043O01Sequence702011604 (15)ref|XP_009789243.1|8e-116PREDICTED: aldehyde dehydrogenase family 7 member B4 [Nicotiana sylvestris] ref762011604 (15)ref|XP_010261826.1|6e-83PREDICTED: aldehyde dehydrogenase family 7 member A1 [Nelumbo nucifera] ref|XP_
JMSF045H08Sequence734011604 (15)ref|XP_009789243.1|4e-130PREDICTED: aldehyde dehydrogenase family 7 member B4 [Nicotiana sylvestris] ref713011604 (15)ref|XP_010917487.1|6e-50PREDICTED: aldehyde dehydrogenase family 7 member A1 [Elaeis guineensis]

Alignment

This contig is upended


. : . : . : . : . : . :
rJMSF045H08- TTCTGAT
rJMFF041C02- GAT
rJMFF030B15- GAT
                      ____________________________________________________________
consensus TTCTGAT
 
. : . : . : . : . : . :
rJMSF045H08- GGATTATTAGTATCATAATAAAGTGTTCTTATGATTCAAATTAATTCAAAGTTGTGTTTC
rJMFF041C02- GGATTATTAGTATCATAATAAAGTGTTCTTATGATTCAAATTAATTCAAAGTTGTGTTTC
rJMFF030B15- GGATTATTAGTATCATAATAAAGTGTTCTTATGATTCAAATTAATTCAAAGTTGTGTTTC
rJMSF020C02- AGTGTTCTTATGATTCAAATTAATTCAAAGTTGTGTTTC
rJMSF042G15- ATAATAAAGTGTTCTTATGATTCAAATTAATTCAAAGTTGTGTTTC
rJMFF025L19- TGTGTTTC
rJMSF043O01- TTAGTATCATAATAAAGTGTTCTTATGATTCAAATTAATTCAAAGTTGTGTTTC
                      ____________________________________________________________
consensus GGATTATTAGTATCATAATAAAGTGTTCTTATGATTCAAATTAATTCAAAGTTGTGTTTC
 
. : . : . : . : . : . :
rJMSF045H08- AAGGACTGCAGAAGTGCAGATTAGAATGGCAAGACCTGAGATTTCCGCTCAAGACAAGGA
rJMFF041C02- AAGGACTGCAGAAGTGCAGATTAGAATGGCAAGACCTGAGATTTCCGCTCAAGACAAGGA
rJMFF030B15- AAGGACTGCAGAAGTGCAGATTAGAATGGCAAGACCTGAGATTTCCGCTCAAGACAAGGA
rJMSF020C02- AAGGACTGCAGAAGTGCAGATTAGAATGGCAAGACCTGAGATTTCCGCTCAAGACAAGGA
rJMSF042G15- AAGGACTGCAGAAGTGCAGATTAGAATGGCAAGACCTGAGATTTCCGCTCAAGACAAGGA
rJMFF025L19- AAGGACTGCAGAAGTGCANATTAGAATGGCAAGACCTGAGATTTCCGCTCAAGANAANGA
rJMSF043O01- AAGGACTGCAGAAGTGCAGATTAGAATGGCAAGACCTGAGATTTCCGCTCAAGACAAGGA
                      ____________________________________________________________
consensus AAGGACTGCAGAAGTGCAGATTAGAATGGCAAGACCTGAGATTTCCGCTCAAGACAAGGA
 
. : . : . : . : . : . :
rJMSF045H08- GAGGAATGGAGATCATCAGCCACTGCAGTATTTTATTTGAGATTTGGTTGTTCAACTTTA
rJMFF041C02- GAGGAATGGAGATCATCAGCCACTGCAGTATTTTATTTGAGATTTGGTTGTTCAACTTTA
rJMFF030B15- GAGGAATGGAGATCATCAGCCACTGCAGTATTTTATTTGAGATTTGGTTGTTCAACTTTA
rJMSF020C02- GAGGAATGGAGATCATCAGCCACTGCAGTATTTTATTTGAGATTTGGTTGTTCAACTTTA
rJMSF042G15- GAGGAATGGAGATCATCAGCCACTGCAGTATTTTATTTGAGATTTGGTTGTTCAACTTTA
rJMFF025L19- GAGGAATGGAGATCATCANCCACTGCNGTATTTTATTTGAGATTTGGNTGNTCAACTTTA
rJMSF043O01- GAGGAATGGAGATCATCAGCCACTGCAGTATTTTATTTGAGATTTGGTTGTTCAACTTTA
                      ____________________________________________________________
consensus GAGGAATGGAGATCATCAGCCACTGCAGTATTTTATTTGAGATTTGGTTGTTCAACTTTA
 
. : . : . : . : . : . :
rJMSF045H08- GAGATAGATAACCTGAGTAACTCTCAGTTTGTCTAGGATAAGAGCCGAGAACCTGTGAGC
rJMFF041C02- GAGATAGATAACCTGAGTAACTCTCAGTTTGTCTAGGATAAGAGCCGAGAACCTGTGAGC
rJMFF030B15- GAGATAGATAACCTGAGTAACTCTCAGTTTGTCTAGGATAAGAGCCGAGAACCTGTGAGC
rJMSF020C02- GAGATAGATAACCTGAGTAACTCTCAGTTTGTCTAGGATAAGAGCCGAGAACCTGTGAGC
rJMSF042G15- GAGATAGATAACCTGAGTAACTCTCAGTTTGTCTAGGATAAGAGCCGAGAACCTGTGAGC
rJMFF025L19- NAGATAGATAACCTGAGTAACTCTCAGTTTGTCTAGGATAANAGCCGAGAACCTGTGAGC
rJMSF043O01- GAGATAGATAACCTGAGTAACTCTCAGTTTGTCTAGGATAAGAGCCGAGAACCTGTGAGC
                      ____________________________________________________________
consensus GAGATAGATAACCTGAGTAACTCTCAGTTTGTCTAGGATAAGAGCCGAGAACCTGTGAGC
 
. : . : . : . : . : . :
rJMSF045H08- TCTGATCATACA-GAGATTTCTCTCAACCAAAATTTATTCCTTGTGCCAAGGGTAATTCA
rJMFF041C02- TCTGATCATACA-GAGATTTCTCTCAACCAAAATTTATTCCTTGTGCCAAGGGTAATTCA
rJMFF030B15- TCTGATCATACA-GAGATTTCTCTCAACCAAAATTTATTCCTTGTGCCAAGGGTAATTCA
rJMSF020C02- TCTGATCATACA-GAGATTTCTCTCAACCAAAATTTATTCCTTGTGCCAAGGGTAATTCA
rJMSF042G15- TCTGATCATACA-GAGATTTCTCTCAACCAAAATTTATTCCTTGTGCCAAGGGTAATTCA
rJMFF025L19- TCTGATCATACAGGAGATTTCTCTCAACCAAAATTTATTCCTTGTGCCAAGGGTAATTCA
rJMSF043O01- TCTGATCATACA-GAGATTTCTCTCAACCAAAATTTATTCCTTGTGCCAAGGGTAATTCA
                      ____________________________________________________________
consensus TCTGATCATACA-GAGATTTCTCTCAACCAAAATTTATTCCTTGTGCCAAGGGTAATTCA
 
. : . : . : . : . : . :
rJMSF045H08- GACCCATAGTTGATTGTACAAGTTGAGCGTCTCATATATTGCTTCCAGGAATCGCTCCCC
rJMFF041C02- GACCCATAGTTGATTGTACAAGTTGAGCGTCTCATATATTGCTTCCAGGAATCGCTCCCC
rJMFF030B15- GACCCATAGTTGATTGTACAAGTTGAGCGTCTCATATATTGCTTCCAGGAATCGCTCCCC
rJMSF020C02- GACCCATAGTTGATTGTACAAGTTGAGCGTCTCATATATTGCTTCCAGGAATCGCTCCCC
rJMSF042G15- GACCCATAGTTGATTGTACAAGTTGAGCGTCTCATATATTGCTTCCAGGAATCGCTCCCC
rJMFF025L19- GACCCNTAGNTGATTGTACAAGTTGAGCGTCTCATATATTGCTTCCANGAATCGCTCCCC
rJMSF043O01- GACCCATAGTTGATTGTACAAGTTGAGCGTCTCATATATTGCTTCCAGGAATCGCTCCCC
                      ____________________________________________________________
consensus GACCCATAGTTGATTGTACAAGTTGAGCGTCTCATATATTGCTTCCAGGAATCGCTCCCC
 
. : . : . : . : . : . :
rJMSF045H08- GCTTCACGACCACCTCCAGTAGCTTTTTCTCCTCCAAAAGCACCACCAATCTCAGCTCCA
rJMFF041C02- GCTTCACGACCACCTCCAGTAGCTTTTTCTCCTCCAAAAGCACCACCAATCTCAGCTCCA
rJMFF030B15- GCTTCACGACCACCTCCAGTAGCTTTTTCTCCTCCAAAAGCACCACCAATCTCAGCTCCA
rJMSF020C02- GCTTCACGACCACCTCCAGTAGCTTTTTCTCCTCCAAAAGCACCACCAATCTCAGCTCCA
rJMSF042G15- GCTTCACGACCACCTCCAGTAGCTTTTTCTCCTCCAAAAGCACCACCAATCTCAGCTCCA
rJMFF025L19- GCTTCACGACCACCTCCAGTAGCTTTTTCTCCTCCAAAAGCACCACCAATCTCAGCTCCN
rJMSF043O01- GCTTCACGACCACCTCCAGTAGCTTTTTCTCCTCCAAAAGCACCACCAATCTCAGCTCCA
                      ____________________________________________________________
consensus GCTTCACGACCACCTCCAGTAGCTTTTTCTCCTCCAAAAGCACCACCAATCTCAGCTCCA
 
. : . : . : . : . : . :
rJMSF045H08- TTTGTTGGTATGTTCACATTAACAATACCACAATCACTTCCTAAAGGACCAATCCAATTG
rJMFF041C02- TTTGTTGGTATGTTCACATTAACAATACCACAATCACTTCCTAAAGGACCAATCCAATTG
rJMFF030B15- TTTGTTGGTATGTTCACATTAACAATACCACAATCACTTCCTAAAGGACCAATCCAATTG
rJMSF020C02- TTTGTTGGTATGTTCACATTAACAATACCACAATCACTTCCTAAAGGACCAATCCAATTG
rJMSF042G15- TTTGTTGGTATGTTCACATTAACAATACCACAATCACTTCCTAAAGGACCAATCCAATTG
rJMFF025L19- TTTGTNGGTATGTTCACATTAACAATACCACNATCACTTCCTAAAGGACCAATCCAATTG
rJMSF043O01- TTTGTTGGTATGTTCACATTAACAATACCACAATCACTTCCTAAAGGACCAATCCAATTG
                      ____________________________________________________________
consensus TTTGTTGGTATGTTCACATTAACAATACCACAATCACTTCCTAAAGGACCAATCCAATTG
 
. : . : . : . : . : . :
rJMSF045H08- AATATATATTCAGGTTTCTTGGTGAAGATTGAACTACTCAAACCCTGAGGCACAGAGTTG
rJMFF041C02- AATATATATTCAGGTTTCTTGGTGAAGATTGAACTACTCAAACCCTGAGGCACAGAGTTG
rJMFF030B15- AATATATATTCAGGTTTCTTGGTGAAGATTGAACTACTCAAACCCTGAGGCACAGAGTTG
rJMSF020C02- AATATATATTCAGGTTTCTTGGTGAAGATTGAACTACTCAAACCCTGAGGCACAGAGTTG
rJMSF042G15- AATATATATTCAGGTTTCTTGGTGAAGATTGAACTACTCAAACCCTGAGGCACAGAGTTG
rJMFF025L19- AATATATATTCAGGTTTCTTGGTGAAGATTGAACTACTCAAACCCTGAGGCACAGAGTTG
rJMSF043O01- AATATATATTCAGGTTTCTTGGTGAAGATTGAACTACTCAAACCCTGAGGCACAGAGTTG
                      ____________________________________________________________
consensus AATATATATTCAGGTTTCTTGGTGAAGATTGAACTACTCAAACCCTGAGGCACAGAGTTG
 
. : . : . : . : . : . :
rJMSF045H08- TTTATTTCAACAGCCTCCTTAAATGTCTTAAAATTTCATAACATAAAGAACT-GGGCCAA
rJMFF041C02- TTTATTTCAACAGCCTCCTTAAATGTCTTAAATTTCATA-ACATAAAGAACTGG
rJMFF030B15- TTTATTTCAACAGCCTCCTTAAATGTCTTAAATTTCATA-ACATAAAGAACT-GGGCCAA
rJMSF020C02- TTTATTTCAACAGCCTCCTTAAATGTCTTAAATTTCATA-ACATAAAGAACT-GGGCCAA
rJMSF042G15- TTTATTTCAACAGCCTCCTTAAATGTCTTAAATTTCATACACATAAAGAACTGGGGCCAA
rJMFF025L19- TTTATTTCAACAGCCTCCTTAAATGTCTTANATTTCNTA-ACATAAAGAACT-GGGCCAA
rJMSF043O01- TTTATTTCAACAGCCTCCTTAAATGTCTTAAATTTCATA-ACATAAAGAACT-GGGCCAA
                      ____________________________________________________________
consensus TTTATTTCAACAGCCTCCTTAAATGTCTTAAATTTCATA-ACATAAAGAACT-GGGCCAA
 
. : . : . : . : . : . :
rJMSF045H08- ACAACTCTTCCTTCACGACATTAGCACTTGGAGATATTTCTACTATTGNTTGGCTGCACA
rJMFF030B15- ACAACTCTTCCTTCACGACATTAGCACTTGGAGATATTTCTACTATTG-TTGGCTGCACA
rJMSF020C02- ACAACTCTTCCTTCACGACATTAGCACTTGGAGATATTTCTACTATTG-TTGGCTGCACA
rJMSF042G15- ACAACTCTTCCTTCACGACATTAGCAC
rJMFF025L19- ACAACTCTTCCTTCACGACATTANCACTTGGAGATATTTCTACTATTG-TTGGCTGCACA
rJMSF043O01- ACAACTCTTCCTTCACGACATTAGCACTTGGAGATATTTCTACTATTG-TTGGCTGCACA
JMFS078F02+ CTACTATTG-TTGGCTGCACA
                      ____________________________________________________________
consensus ACAACTCTTCCTTCACGACATTAGCACTTGGAGATATTTCTACTATTG-TTGGCTGCACA
 
. : . : . : . : . : . :
rJMSF045H08- AAGTTCCCTTCAGATGGTATAACTGAACCTCCTGTAAGGATCTTGCCT
rJMFF030B15- AAGTTCCCTTCAGATGGTATAACTGAACCTCCTGTAAGGATCTTGCCTCCCTCCGAAACA
rJMSF020C02- AAGTTCCCTTCAGATGGTATAACTGAACCTCCTGTAAGGATCTTGCCTCCCTCCGAAACA
rJMFF025L19- AAGGTCCCTTCAGATGGTATAACTGAA
rJMSF043O01- AAGTTCCCTTCAGATGGTATAACTGAACCTCCTGTAAGGATCTTGCCTCCCTCCGAAACA
JMFS078F02+ AAGTTCCCTTCAGATGGTATAACTGAACCTCCTGTAAGGATCTTGCCTCCCTCCGAAACA
                      ____________________________________________________________
consensus AAGTTCCCTTCAGATGGTATAACTGAACCTCCTGTAAGGATCTTGCCTCCCTCCGAAACA
 
. : . : . : . : . : . :
rJMFF030B15- ATTTTCTGAATTCCTTTCTCAAAGTTCTCCCTTG
rJMSF020C02- ATTTTCTGAATTCCTTTCTCAA
rJMSF043O01- ATTTTCTGAATTCCTTTCTCAAAGTTCTCCCTTGAAGAACGTGTATGCAGTG
JMFS078F02+ ATTTTCTGAATTCCTTTCTCAAAGTTCTCCCTTGAAGAACGTGTATGCAGTGGTCCAAGC
                      ____________________________________________________________
consensus ATTTTCTGAATTCCTTTCTCAAAGTTCTCCCTTGAAGAACGTGTATGCAGTGGTCCAAGC
 
. : . : . : . : . : . :
JMFS078F02+ AAGGTACCCTTCTCTAAAGGATCTCCTATCTTAACTTGCTTGTATACATCAAGAAGTCGT
                      ____________________________________________________________
consensus AAGGTACCCTTCTCTAAAGGATCTCCTATCTTAACTTGCTTGTATACATCAAGAAGTCGT
 
. : . : . : . : . : . :
JMFS078F02+ TCAACTACTTTGTGATATATACTTTCATGAATAAGCAGCCTACGGCATGTTGTGCAGCGC
                      ____________________________________________________________
consensus TCAACTACTTTGTGATATATACTTTCATGAATAAGCAGCCTACGGCATGTTGTGCAGCGC
 
. : . : . : . : . : . :
JMFS078F02+ TGACCGGCTGTTCCAACCGCAGCAAACAAAACAGCACGAACCACAAGTTCAATTTCGGAA
                      ____________________________________________________________
consensus TGACCGGCTGTTCCAACCGCAGCAAACAAAACAGCACGAACCACAAGTTCAATTTCGGAA
 
. : . : . : . : . : . :
JMFS078F02+ TCATCCATTACAATTATAGCATTATTACCACTTAACTCAAGTAGGCATTTACCAAACCTC
                      ____________________________________________________________
consensus TCATCCATTACAATTATAGCATTATTACCACTTAACTCAAGTAGGCATTTACCAAACCTC
 
. : . : . : . : . : . :
JMFS078F02+ TGATTTACTGTTTGTTGTACTGAAAGACCCACCTTTGAGCTACCAGTGAATGACACTAGA
                      ____________________________________________________________
consensus TGATTTACTGTTTGTTGTACTGAAAGACCCACCTTTGAGCTACCAGTGAATGACACTAGA
 
. : . : . : . : . : . :
JMFS078F02+ GGGATTCGTGTATCTTTTGCTATGGCTTGACCAATTTCAGCACCCCCACAAAAAGCAGTG
JMSF042G15+ CTATGGCTTGACCAATTTCAGCACCCCCACAAAAAGCAGTG
                      ____________________________________________________________
consensus GGGATTCGTGTATCTTTTGCTATGGCTTGACCAATTTCAGCACCCCCACAAAAAGCAGTG
 
. : . : . : . : . : . :
JMFS078F02+ AAAATTGCACCAGGCAAATTGTTTTTCTCTAACACCCCAGCAATGATTTTTGTCATTGCT
JMSF042G15+ AAAATTGCACCAGGCAAATTGTTTTTCTCTAACACCCCAGCAATGATTTTTGTCATTGCT
JMSF045H08+ CAGCAATGATTTTTGTCATTGCT
                      ____________________________________________________________
consensus AAAATTGCACCAGGCAAATTGTTTTTCTCTAACACCCCAGCAATGATTTTTGTCATTGCT
 
. : . : . : . : . : . :
JMFS078F02+ ATTGTAACCAATGGTGTAGTTGGAGCACCTTTCCAGACAACACAGTTGCCACATACTAAT
JMSF042G15+ ATTGTAACCAATGGTGTAGTTGGAGCACCTTTCCAGACAACACAGTTGCCACATACTAAT
JMFS110D08+ ACATACTAAT
JMSF045H08+ ATTGTAACCAATGGTGTAGTTGGAGCACCTTTCCAGACAACACAGTTGCCACATACTAAT
JMSF043O01+ TAGTTGGAACACCTTTCCAGACAACACAGTTGCCACATACTAAT
                      ____________________________________________________________
consensus ATTGTAACCAATGGTGTAGTTGGAGCACCTTTCCAGACAACACAGTTGCCACATACTAAT
 
. : . : . : . : . : . :
JMFS078F02+ GCAAGGCATGCA
JMSF042G15+ GCAAGGCATGCATTCCATCCAAGAACTGCACATGGAAAGTTAAAAGCTGTAATGACACCA
JMFS110D08+ GCAAGGCATGCATTCCATCCAAGAACTGCACATGGAAAGTTAAAAGCTGTAATGACACCA
JMSF045H08+ GCAAGGCATGCATTCCATCCAAGAACTGCACATGGAAAGTTAAAAGCTGTAATGACACCA
JMSF043O01+ GCAAGGCATGCATTCCATCCAAGAANTGCACATGGAAAGTTAAAAGCTGTAATGACACCA
JMFF041C02+ CATCCAAGAACTGCACATGGAAAGTTAANAGCTGTAATGACACCA
                      ____________________________________________________________
consensus GCAAGGCATGCATTCCATCCAAGAACTGCACATGGAAAGTTAAAAGCTGTAATGACACCA
 
. : . : . : . : . : . :
JMSF042G15+ ACTACCCCTAGAGGATTCCACATCTCCAACATCGCATGATTAGGGCGTTCTGATGGTATG
JMFS110D08+ ACTACCCCTAGAGGATTCCACATCTCCAACATCGCATGATTAGGGCGTTCTGATGGTATG
JMSF045H08+ ACTACCCCTAGAGGATTCCACATCTCCAACATCGCATGATTAGGGCGTTCTGATGGTATG
JMSF043O01+ ACTACCCNTAGAGGATTCCACATCTCCAACATCGCATGATTAGGGCGTTCTGATGGTATG
JMFF025L19+ TAGAGGATTCCACATCTCCAACATCGCATGATTAGGGCGTTCTGATGGTATG
JMFF041C02+ ACTACCCCTAGAGGATTCCACATCTCCAACATCGCATGATTAGGGCGTTCTGATGGTATG
                      ____________________________________________________________
consensus ACTACCCCTAGAGGATTCCACATCTCCAACATCGCATGATTAGGGCGTTCTGATGGTATG
 
. : . : . : . : . : . :
JMSF042G15+ ACTGATCCATTTAGTTGTCGGCTCAAACCAACAGCGAAGTCACACATGTCAACAATTTCT
JMFS110D08+ ACTGATCCATTTAGTTGTCGGCTCAAACCAACAGCGAAGTCACACATGTCAACAATTTCT
JMSF045H08+ ACTGATCCATTTAGTTGTCGGCTCAAACCAACAGCGAAGTCACACATGTCAACAATTTCT
JMSF043O01+ ANTGATCCATTTAGTTGTCGGCTCAAACCAACAGCGAAGTCACACATGTCAACAATTTCT
JMFF025L19+ ACTGATCCATTTAGTTGTCGGCTCAAACCAACAGCGAAGTCACACATGTCAACAATTTCT
JMFF041C02+ ACTGATCCATTTAGTTGTCGGCTCAAACCAACAGCGAAGTCACACATGTCAACAATTTCT
                      ____________________________________________________________
consensus ACTGATCCATTTAGTTGTCGGCTCAAACCAACAGCGAAGTCACACATGTCAACAATTTCT
 
. : . : . : . : . : . :
JMSF042G15+ TGAACCTCCCCAATTCCTTCGGGTAGTATTTTCCCCATTTCAAGTGAAACAAGTCGGCCA
JMFS110D08+ TGAACCTCCCCAATTCCTTCGGGTAGTATTTTCCCCATTTCAAGTGAAACAAGTCGGCCA
JMSF045H08+ TGAACCTCCCCAATTCCTTCGGGTAGTATTTTCCCCATTTCAAGTGAAACAAGTCGGCCA
JMSF043O01+ TGAACCTCCCCAATTCCTTCGGGTAGTATTTTCCCCATTTCAAGTGAAACAAGTCGGCCA
JMFF025L19+ TGAACCTCCCCAATTCCTTCGGGTAGTATTTTCCCCATTTCAAGTGAAACAAGTCGGCCA
JMFF041C02+ TGAACCTCCCCAATTCCTTCGGGTAGTATTTTCCCCATTTCAAGTGAAACAAGTCGGCCA
                      ____________________________________________________________
consensus TGAACCTCCCCAATTCCTTCGGGTAGTATTTTCCCCATTTCAAGTGAAACAAGTCGGCCA
 
. : . : . : . : . : . :
JMSF042G15+ AAGTAGTGAAGTTTTGCTCTAAGTGCATCACCAATCTGCCTAACAATATCACCTCTTTTT
JMFS110D08+ AAGTAGTGAAGTTTTGCTCTAAGTGCATCACCAATCTGCCTAACAATATCACCTCTTTTT
JMSF045H08+ AAGTAGTGAAGTTTTGCTCTAAGTGCATCACCAATCTGCCTAACAATATCACCTCTTTTT
JMSF043O01+ AAGTAGTGAAGTTTTGCTCTAAGTGCATCACCAATCTGCCTAACAATATCACCTCTTTTT
JMFF025L19+ AAGTAGTGAAGTTTTGCTCTAAGTGCATCACCAATCTGCCTAACAATATCACCTCTTTTT
JMFF030B15+ CCTCTTTTT
JMFF041C02+ AAGTAGTGAAGTTTTGCTCTAAGTGCATCACCAATCTGCCTAACAATATCACCTCTTTTT
                      ____________________________________________________________
consensus AAGTAGTGAAGTTTTGCTCTAAGTGCATCACCAATCTGCCTAACAATATCACCTCTTTTT
 
. : . : . : . : . : . :
JMSF042G15+ GGTGCTGGAATCTGCATCCACAGCTTTGCTGCTTCGTTACAAGCCTGCATGCCTTCTTCA
JMFS110D08+ GGTGCTGGAATCTGCATCCACAGCTTTGCTGCTTCGTTACAAGCCTGCATGCCTTCTTCA
JMSF045H08+ GGTGCTGGAATCTGCATCCACAGCTTTGCTGCTTCGTTACAAGCCTGCATGCCTTCTTCA
JMSF043O01+ GGTGCTGGAATCTGCATCCACAGCTTTGCTGCTTCGTTACAAGCCTGCACGCCTTCTTCA
JMFF025L19+ GGTGCTGGAATCTGCATCCACAGCTTTGCTGCTTCGTTACAAGCCTGCATGCCTTCTTCA
JMFF030B15+ GGTGCTGGAATCTGCATCCACAGCTTTGCTGCTTCGTTACAAGCCTGCATGCCTTCTTCA
JMFF041C02+ GGTGCTGGAATCTGCATCCACAGCTTTGCTGCTTCGTTACAAGCCTGCATGCCTTCTTCA
                      ____________________________________________________________
consensus GGTGCTGGAATCTGCATCCACAGCTTTGCTGCTTCGTTACAAGCCTGCATGCCTTCTTCA
 
. : . : . : . : . : . :
JMSF042G15+ TAATCTTCAATTGAAGCTTCAACAACTTCGGCTATGGTCTCATTGTTGGCCGGATTTACA
JMFS110D08+ TAATCTTCAATTGAAGCTTCAACAACTTCGGCTATGGTCTCATTGTTGGCCGGATTTACA
JMSF045H08+ TAATCTTCAATTGAAGCTTCAACAACTTCGGCTATGGTCTCATTGTTGGCCGGATTTACA
JMSF043O01+ TAATCTTCAATNGAAGCTTCAACAACTTCGGCTATGGTNTCATTGTTGGCCGGATTTACA
JMFF025L19+ TAATCTTCAATTGAAGCTTCAACAACTTCGGCTATGGTCTCATTGTTGGCCGGATTTACA
JMFF030B15+ TAATCTTCAATTGAAGCTTCAACAACTTCGGCTATGGTCTCATTGTTGGCCGGATTTACA
JMFF041C02+ TAATCTTCAATTGAAGCTTCAACAACTTCGGCTATGGTCTCATTGTTGGCCGGATTTACA
                      ____________________________________________________________
consensus TAATCTTCAATTGAAGCTTCAACAACTTCGGCTATGGTCTCATTGTTGGCCGGATTTACA
 
. : . : . : . : . : . :
JMSF042G15+ GTGGAGACCGTAGGTCCACTAGCCTTCCACGCCCCATTGACGTAGCAGCCGAGGTTTGTA
JMFS110D08+ GTGGAGACCGTAGGTCCACTAGCCTTCCACGCCCCATTGACGTAGCAGCCGAGGTTTGTA
JMSF045H08+ GTGGAGACCGTAGGTCCACTAGCCTTCCACGCCCCATTGACGTAGCAGCCGAGGTTTGTA
JMSF043O01+ GTGGAGACCGTAGGTCCACTAGCCTTCCACGCCCCATTGACGTAGCAGCCGAGGTTTGTA
JMFF025L19+ GTGGAGACCGTAGGTCCACTAGCCTTCCACGCCCCATTGACGTAGCAGCCGAGGTTTGTA
JMFF030B15+ GTGGAGACCGTAGGTCCACTAGCCTTCCACGCCCCATTGACGTAGCAGCCGAGGTTTGTA
JMFF041C02+ GTGGAGACCGTAGGTCCACTAGCCTTCCACGCCCCATTGACGTAGCAGCCGAGGTTTGTA
                      ____________________________________________________________
consensus GTGGAGACCGTAGGTCCACTAGCCTTCCACGCCCCATTGACGTAGCAGCCGAGGTTTGTA
 
. : . : . : . : . : . :
JMSF042G15+ GGGCCGATTCCGATCTCCTTGAGGAACTCGTGCTCTCGCTTCGCGAAACTCATCTTTGGA
JMFS110D08+ GGGCCGATTCCGATCTCCTTGAGGAACTCGTGCTCTCGCTTCGCGAAACTCATCTTTGGA
JMSF045H08+ GGGCCGATTCCGATCTCCTTGAGGAACTCGTGCTCTCGCTTCGCGAAACTCATCTTTGGA
JMSF043O01+ GGGCCGATTCCGATCTCCNTGAGGAACTCGTGCTCTCGCTTCGCGAAACTCATCTTTGGA
JMFF025L19+ GGGCCGATTCCGATCTCCTTGAGGAACTCGTGCTCTCGCTTCGCGAAACTCATCTTTGGA
JMFF030B15+ GGGCCGATTCCGATCTCCTTGAGGAACTCGTGCTCTCGCTTCGCGAAACTCATCTTTGGA
JMFF041C02+ GGGCCGATTCCGATCTCCTTGAGGAACTCGTGCTCTCGCTTCGCGAAACTCATCTTTGGA
                      ____________________________________________________________
consensus GGGCCGATTCCGATCTCCTTGAGGAACTCGTGCTCTCGCTTCGCGAAACTCATCTTTGGA
 
. : . : . : . : . : . :
JMSF042G15+ ACCGGAGAAATAGCTTGATATAATCTCGCCTGTAATCCCGAGACACGATGCCTATGCCGG
JMFS110D08+ ACCGGAGAAATAGCTTGATATAATCTCGCCTGTAATCCCGAGACACGATGCCTATGCCGG
JMSF045H08+ ACCGGAGAAATAGCTTGATATAATCTCGCCTGTAATCCCGAGACACGATGCCTATGCCGG
JMSF043O01+ ACCGGAGAAATAGCTTGATATAATCTCGCCTGTAATCCCGAGACACGATGCCTATGCCGG
JMFF025L19+ ACCGGAGAAATAGCTTGATATAATCTCGCCTGTAATCCCGAGACACGATGCCTATGCCGG
JMFF030B15+ ACCGGAGAAATAGCTTGATATAATCTCGCCTGTAATCCCGAGACACGATGCCTATGCCGG
JMFF041C02+ ACCGGAGAAATAGCTTGATATAATCTCGCCTGTAATCCCGAGACACGATGCCTATGCCGG
                      ____________________________________________________________
consensus ACCGGAGAAATAGCTTGATATAATCTCGCCTGTAATCCCGAGACACGATGCCTATGCCGG
 
. : . : . : . : . : . :
JMSF042G15+ AGCTAGTGCACTGGTATGTATGCTA-CTGTGATGATTGATTGCTAAATGC
JMFS110D08+ AGCTAGTGCACTGG
JMSF045H08+ AGCTAGTGCACTGGTATGTATGCTA-CTGTGATGATTGATTGCTAAATGC
JMSF043O01+ AGCTAGTGCACTGGTATGTATGNTAGCTGTGATGATTGATTGCTAAATGCTAA
JMFF025L19+ AGCTAGTGCACTGGTATGTATGCTA-CTGTGATGATTGATTGCTAAATGCTAA
JMFF030B15+ AGCTAGTGCACTGGTATGTATGCTA-CTGTGATGATTNATTGCTAAATGCTAA
JMFF041C02+ AGCTAGTGCACTGGTATGTATGCTA-CTGTGATGATTGATTGCTAAATGCTAAATCATTT
                      ____________________________________________________________
consensus AGCTAGTGCACTGGTATGTATGCTA-CTGTGATGATTGATTGCTAAATGCTAAATCATTT