Contig 011595:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF037N02-             GATAGCCATACAAGGTTTACTTGTCACTATCAATATACATCTCTCATAGGTTATCAA
rJMSF029G21-                                             ATATACATCTCTCATAGGTTATCAA
                      ____________________________________________________________
consensus                GATAGCCATACAAGGTTTACTTGTCACTATCAATATACATCTCTCATAGGTTATCAA
 
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rJMFF037N02-          TACAGGTCTGAAATTACCCTTCATGGGAACAGCTTTTACAATCTACAAATGTATGGAACA
rJMSF029G21-          TACAGGTCTGAAATTACCCTTCATGGGAACAGCTTTTACAATCTACAAATGTATGGAACA
                      ____________________________________________________________
consensus             TACAGGTCTGAAATTACCCTTCATGGGAACAGCTTTTACAATCTACAAATGTATGGAACA
 
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rJMFF037N02-          GCTTTGAATGATTTGTAGGGTAATCTAAAAGTACTTCAAAAAAGGCGGTAAGCCAGCAGA
rJMSF029G21-          GCTTTGAATGATTTGTAGGGTAATCTAAAAGTACTTCAAAAAAGGCGGTAAGCCAGCAGA
                      ____________________________________________________________
consensus             GCTTTGAATGATTTGTAGGGTAATCTAAAAGTACTTCAAAAAAGGCGGTAAGCCAGCAGA
 
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rJMFF037N02-          AGGATAACCAGCCATTGCGAGGAAGATGGATTGTTTTCCGGCTATGCCCAAACTCGCTTT
rJMSF029G21-          AGGATAACCAGCCATTGCGAGGAAGATGGATTGTTTTCCGGCTATGCCCAAACTCGCTTT
                      ____________________________________________________________
consensus             AGGATAACCAGCCATTGCGAGGAAGATGGATTGTTTTCCGGCTATGCCCAAACTCGCTTT
 
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rJMFF037N02-          CTGGGGACAAGGTCTGATGTTTTAACTGCGTCTATTTTAGCAGCTACAATGAAGTCATTC
rJMSF029G21-          CTGGGGACAAGGTCTGATGTTTTAACTGCGTCTATTTTAGCAGCTACAATGAAGTCATTC
                      ____________________________________________________________
consensus             CTGGGGACAAGGTCTGATGTTTTAACTGCGTCTATTTTAGCAGCTACAATGAAGTCATTC
 
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rJMFF037N02-          AGGCTCAAGCCTCCAATGGAAGATGTCCATAGATTAGCTCTAAGATGGTTGGCCTCCTGC
rJMSF029G21-          AGGCTCAAGCCTCCAATGGAAGATGTCCATAGATTAGCTCTAAGATGGTTGGCCTCCTGC
                      ____________________________________________________________
consensus             AGGCTCAAGCCTCCAATGGAAGATGTCCATAGATTAGCTCTAAGATGGTTGGCCTCCTGC
 
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rJMFF037N02-          TCCAAATGAAGATTAGAGGAATGCCCTGTGCCTTCCACCACCTCATTTATTCTATTGATG
rJMSF029G21-          TCCAAATGAAGATTAGAGGAATGCCCTGTGCCTTCCACCACCTCATTTATTCTATTGATG
                      ____________________________________________________________
consensus             TCCAAATGAAGATTAGAGGAATGCCCTGTGCCTTCCACCACCTCATTTATTCTATTGATG
 
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rJMFF037N02-          AGTTCAACACAACAATCTGAGTCTCTCAATTTCCATGTACATTGTAGCCTGAGTCCCCCT
rJMSF029G21-          AGTTCAACACAACAATCTGAGTCTCTCAATTTCCATGTACATTGTAGCCTGAGTCCCCCT
JMFF037N02+                                                           CTGAGTCCCCNT
                      ____________________________________________________________
consensus             AGTTCAACACAACAATCTGAGTCTCTCAATTTCCATGTACATTGTAGCCTGAGTCCCCCT
 
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rJMFF037N02-          TCTTCATTTGCCAGTCTCCACCCAACAACCTTGAACAACAACTGGCGAGCTTCAAACTCA
rJMSF029G21-          TCTTCATTTGCCAGTCTCCACCCAACAACCTTGAACAACAACTGGCGAGCTTCAAACTCA
JMSF029G21+                                      ACCTTGAACAACAACTGGCGAGCTTCAAACTCA
JMFF037N02+           TCTTCATTTGCCAGTCTCCACCCAACAACCTTGAACAACAACTGGCGAGCTTCAAACTCA
                      ____________________________________________________________
consensus             TCTTCATTTGCCAGTCTCCACCCAACAACCTTGAACAACAACTGGCGAGCTTCAAACTCA
 
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rJMFF037N02-          GGCATGGGAGGCTGATCAGGTGAAATGGGAGCGCAGTCTTGTTGAGCAAGGGACAGAGCA
rJMSF029G21-          GGCATGGGAGGCTGATCAGGTGAAATGGGAGCGCAGTCTTGTTGAGCAAGGGACAGAGCA
JMSF029G21+           GGCATGGGAGGCTGATCAGGTGAAATGGGAGCGCAGTCTTGTTGAGCAAGGGACAGAGCA
JMFF037N02+           GGCATGGGAGGCTGATCAGGTGAAATGGGAGCGCAGTCTTGTTGAGCAAGGGACAGAGCA
                      ____________________________________________________________
consensus             GGCATGGGAGGCTGATCAGGTGAAATGGGAGCGCAGTCTTGTTGAGCAAGGGACAGAGCA
 
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rJMFF037N02-          GAAGCGTTTGGGATGAGAATCTTGTGCTCGGTGTTCATGTTTCCCAGAATATTATCGGCG
rJMSF029G21-          GAAGCGTTTGGGATGAGAATCTTGTGCTCGGTGTTCATGTTTCCCAGAATATTATCGGCG
JMSF029G21+           GAAGCGTTTGGGATGAGAATCTTGTGCTCGGTGTTCATGTTTCCCAGAATATTATCGGCG
JMFF037N02+           GAAGCGTTTGGGATGAGAATCTTGTGCTCGGTGTTCATGTTTCCCAGAATATTATCGGCG
                      ____________________________________________________________
consensus             GAAGCGTTTGGGATGAGAATCTTGTGCTCGGTGTTCATGTTTCCCAGAATATTATCGGCG
 
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rJMFF037N02-          AAATTGCTCTCNATCTCAGCTGGAAATGGGTCTCTGGCTCCAAAATCACCCAGCAAATCG
rJMSF029G21-          AAATTGCTCTCAATCTCAGCTGGAAATGGGTCTCTGGCTCCAAAATCACCCAGCAAATCG
JMSF029G21+           AAATTGCTCTCAATCTCAGCTGGAAATGGGTCTCTGGCTCCAAAATCACCCAGCAAATCG
JMFF037N02+           AAATTGCTCTCAATCTCAGCTGGAAATGGGTCTCTGGCTCCAAAATCACCCAGCAAATCG
                      ____________________________________________________________
consensus             AAATTGCTCTCAATCTCAGCTGGAAATGGGTCTCTGGCTCCAAAATCACCCAGCAAATCG
 
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rJMFF037N02-          ATGCCTTTCTCGGANGCAAGGATTC                                   
rJMSF029G21-          ATGCCTTTCTCGGAGGCAAGGATTCTGGTGCGAATNCGAG                    
JMSF029G21+           ATGCCTTTCTCGGAGGCAAGGATTCTGGTGCGAATTCGAGATTGAGGTTTTTGAATGGGG
JMFF037N02+           ATGCCTTTCTCGGAGGCAAGGATTCTGGTGCGAATTCGAGATTGAGGTTTTTGAATGGGG
                      ____________________________________________________________
consensus             ATGCCTTTCTCGGAGGCAAGGATTCTGGTGCGAATTCGAGATTGAGGTTTTTGAATGGGG
 
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JMSF029G21+           AGAATTGAAAAGGCAACTTTTTGGGACTTGTGGGAAGACAGAGAAGAGGGGGAAAAAGAA
JMFF037N02+           AGAATTGAAAAGGCAACTTTTTGGGACTTGTGGGAAGACAGAGAAGAGGGGGAAAAAGAA
                      ____________________________________________________________
consensus             AGAATTGAAAAGGCAACTTTTTGGGACTTGTGGGAAGACAGAGAAGAGGGGGAAAAAGAA
 
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JMSF029G21+           GGAGAGAAGCATAGATAAGTGGTTGCAGCCATGGAATTGGGAGAAGTGTGAAGTTAGTTT
JMFF037N02+           GGAGAGAAGCATAGATAAGTGGTTGCAGCCATGGAATTGGGAGAAGTGTGAAGTTAGTTT
                      ____________________________________________________________
consensus             GGAGAGAAGCATAGATAAGTGGTTGCAGCCATGGAATTGGGAGAAGTGTGAAGTTAGTTT
 
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JMSF029G21+           GTTGCAGGGAAGAGAGTAGAGATGAATAGGGCTGTGGTTGTTGTGTTATC          
JMFF037N02+           GTTGCAGGGAAGAGAGTAGAGATGAATAGGGCTGTGGTTGTTGTGTTATCCAGACAGTGG
                      ____________________________________________________________
consensus             GTTGCAGGGAAGAGAGTAGAGATGAATAGGGCTGTGGTTGTTGTGTTATCCAGACAGTGG
 
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JMFF037N02+           TCTGGTTCGTTATGGTGACTATAAGAGCATCCACACTTGTGGATATTGTGGGGAGAATTC
                      ____________________________________________________________
consensus             TCTGGTTCGTTATGGTGACTATAAGAGCATCCACACTTGTGGATATTGTGGGGAGAATTC