Contig 011577:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMSF031A18+                                                          TTTCAGTAAAAGG
                      ____________________________________________________________
consensus                                                            TTTCAGTAAAAGG
 
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JMSF031A18+           AGAGCTGCGAAGATTTAAATAGTAACTAATGGCATCCAGTACATATCTTGCTGCTTTGCC
                      ____________________________________________________________
consensus             AGAGCTGCGAAGATTTAAATAGTAACTAATGGCATCCAGTACATATCTTGCTGCTTTGCC
 
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JMSF031A18+           AAGTAATGCAAATACATCTGTTAAACCAGCTGGTGGAAATTCAACTCCATTGCTTGGCTC
JMFF032A15+                                          GGTGGAAATTCAACTCCATTGCTTGGCTC
                      ____________________________________________________________
consensus             AAGTAATGCAAATACATCTGTTAAACCAGCTGGTGGAAATTCAACTCCATTGCTTGGCTC
 
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JMSF031A18+           TATAGGAGTCAGTCCTGGTCGAAAATCATACGTTTCTTGCCATAGTTGAGGATCTGCACG
JMFF032A15+           TATAGGAGTCAGTCCTGGTCGAAAATCATACGTTTCTTGCCATAGTTGAGGATCTGCACG
                      ____________________________________________________________
consensus             TATAGGAGTCAGTCCTGGTCGAAAATCATACGTTTCTTGCCATAGTTGAGGATCTGCACG
 
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JMSF031A18+           GTAGCCAGAGGTCTTGCACCACTCCCGCGAATCATCAGGATGAATCACATCTGTAGAAGG
JMFF032A15+           GTAGCCAGAGGTCTTGCACCACTCCCGCGAATCATCAGGATGAATCACATCTGTAGAAGG
                      ____________________________________________________________
consensus             GTAGCCAGAGGTCTTGCACCACTCCCGCGAATCATCAGGATGAATCACATCTGTAGAAGG
 
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JMSF031A18+           ATAGGAAGGCTTTTGGTGGAAGTAGAGTCGGGCAGACTCAAGACAAGACCTTAAAAGAGC
JMFF032A15+           ATAGGAAGGCTTTTGGTGGAAGTAGAGTCGGGCAGACTCAAGACAAGACCTTAAAAGAGC
                      ____________________________________________________________
consensus             ATAGGAAGGCTTTTGGTGGAAGTAGAGTCGGGCAGACTCAAGACAAGACCTTAAAAGAGC
 
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JMSF031A18+           ACCATCACTGGTAGGTAGCTGGATAATGGCAGCCGAGTAATGAGCTAGTGATTGGGATAA
JMFF032A15+           ACCATCACTGGTAGGTAGCTGGATAATGGCAGCCGAGTAATTAGCTAGTGATTGGGATAA
                      ____________________________________________________________
consensus             ACCATCACTGGTAGGTAGCTGGATAATGGCAGCCGAGTAATTAGCTAGTGATTGGGATAA
 
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JMSF031A18+           AGTTGTAACCGATAATTTATAGGAATCAGAAGGAAGGCCTTCTGATGGAATTAGATCAAC
JMFF032A15+           AGTTGTAACCGATAATTTATAGGAATCAGAAGGAAGGCCTTCTGATGGAATTAGATCAAC
                      ____________________________________________________________
consensus             AGTTGTAACCGATAATTTATAGGAATCAGAAGGAAGGCCTTCTGATGGAATTAGATCAAC
 
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JMSF031A18+           AAGCTTGATACGACCCAGAGTTGGCAGGTCATTGCCTGCCATGGAAATTATGGAATACTC
JMFF032A15+           AAGCTTGATACGACCCAGAGTTGGCAGGTCATTGCCTGCCATGGAAATTATGGAATACTC
                      ____________________________________________________________
consensus             AAGCTTGATACGACCCAGAGTTGGCAGGTCATTGCCTGCCATGGAAATTATGGAATACTC
 
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JMSF031A18+           TATAGATGCCAAAATAACCAGTAGTAGAATGGAAAAGGCCAATGATGTTCTCTACCAGCT
JMFF032A15+           TATAGATGCCAAAATAACCAGTAGTAGAATGGAAAAGGCCAATGATGTTCTCTACCAGCT
                      ____________________________________________________________
consensus             TATAGATGCCAAAATAACCAGTAGTAGAATGGAAAAGGCCAATGATGTTCTCTACCAGCT
 
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JMSF031A18+           AGTTTGAAGTATCATCAATAGCCTTTCAGAGGCAAAAAGATATGCAAGCAAACAGATTGT
JMFF032A15+           AGTTTGAAGTATCATCAATAGCCTTTCAGAGGCAAAAAGATATGCAAGCAAACAGATTGT
                      ____________________________________________________________
consensus             AGTTTGAAGTATCATCAATAGCCTTTCAGAGGCAAAAAGATATGCAAGCAAACAGATTGT
 
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JMSF031A18+           ACTGCTACTGCCCGTTGTTTCGATGCTCC                               
JMFF032A15+           ACTGCTACTGCCCGTTGTTTCGATGCTCCTTCTTCTTCTTCTTCTTTTCTTCCTCAAAAT
                      ____________________________________________________________
consensus             ACTGCTACTGCCCGTTGTTTCGATGCTCCTTCTTCTTCTTCTTCTTTTCTTCCTCAAAAT