Contig 011575:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF044L19+                                                               GAGTCATG
                      ____________________________________________________________
consensus                                                                 GAGTCATG
 
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JMFS103D09+                                                   TCATGATCATCATCTTGTCT
JMFF044L19+           GCGCTGTGATTTATGCTCCCTATCCCTAACATCATCATCGTCATGATCATCATCTTGTCT
                      ____________________________________________________________
consensus             GCGCTGTGATTTATGCTCCCTATCCCTAACATCATCATCGTCATGATCATCATCTTGTCT
 
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JMFS103D09+           CCTCCGGTGCCCATTCCCGTGTTTATTATCCCCTTCACGTCCACTCCTACGCCTCCGCTC
JMFF044L19+           CCTCCGGTGCCCATTCCCGTGTTTATTATCCCCTTCACGTCCACTCCTACGCCTCCGCTC
JMFF027L22+                                                             GCCTCCGCTC
                      ____________________________________________________________
consensus             CCTCCGGTGCCCATTCCCGTGTTTATTATCCCCTTCACGTCCACTCCTACGCCTCCGCTC
 
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JMFS103D09+           ATAATCTCTATCCCTAGCGCGGTAATTCTCTTCATCCCTATCCCTAGTGCGGTAATTCTC
JMFF044L19+           ATAATCTCTATCCCTAGCGCGGTAATTCTCTTCATCCCTATCCCTAGTGCGGTAATTCTC
JMFF027L22+           ATAATCTCTATCCCTAGCGCGGTAATTCTCTTCATCCCTATCCCTAGTGCGGTAATTCTC
                      ____________________________________________________________
consensus             ATAATCTCTATCCCTAGCGCGGTAATTCTCTTCATCCCTATCCCTAGTGCGGTAATTCTC
 
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JMFS103D09+           TTCATCCCTATCCCTAGTGCGGTAATTTTCTTCCTTGTCTCTTCTGCTACTTTCGTTTTC
JMFF044L19+           TTCATCCCTATCCCTAGTGCGGTAATTTTCTTCCTTGTCTCTTCTGCTACTTTCGTTTTC
JMFF027L22+           TTCATCCCTATCCCTAGTGCGGTAATTTTCTTCCTTGTCTCTTCTGCTACTTTCGTTTTC
JMFF031I02+                     TCCCTAGTGCGGTAATTTTCTTCCTTGTCTCTTCTGCTACTTTCGTTTTC
                      ____________________________________________________________
consensus             TTCATCCCTATCCCTAGTGCGGTAATTTTCTTCCTTGTCTCTTCTGCTACTTTCGTTTTC
 
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JMFS103D09+           CCGCCTGCCGGCATCTTCTCTACCTCTTCTACTTCTCCCCCTTTCCTTCTCTGGTTCATC
JMFF044L19+           CCGCCTGCCGGCATCTTCTCTACCTCTTCTACTTCTCCCCCTTTCCTTCTCTGGTTCATC
JMFF027L22+           CCGCCTGCCGGCATCTTCTCTACCTCTTCTACTTCTCCCCCTTTCCTTCTCTGGTTCATC
JMFF031I02+           CCGCCTGCCGGCATCTTCTCTACCTCTTCTACTTCTCCCCCTTTCCTTCTCTGGTTCATC
                      ____________________________________________________________
consensus             CCGCCTGCCGGCATCTTCTCTACCTCTTCTACTTCTCCCCCTTTCCTTCTCTGGTTCATC
 
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JMFS103D09+           TTTCCCGGCGACTTCACGCCCATCAGATTGCCCTCTTCTTCTACCATCGCTTAATCGGGG
JMFF044L19+           TTTCCCGGCGACTTCACGCCCATCAGATTGCCCTCTTCTTCTACCATCGCTTAATCGGGG
JMFF027L22+           TTTCCCGGCGACTTCACGCCCATCAGATTGCCCTCTTCTTCTACCATCGCTTAATCGGGG
JMFF031I02+           TTTCCCGGCGACTTCACGCCCATCAGATTGCCCTCTTCTTCTACCATCGCTTAATCGGGG
                      ____________________________________________________________
consensus             TTTCCCGGCGACTTCACGCCCATCAGATTGCCCTCTTCTTCTACCATCGCTTAATCGGGG
 
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JMFS103D09+           AGATGCACCGCTATCAGAACTAGGGCTGCGCTTCTTATCTTCGCCTTCTCTTCGATGCTC
JMFF044L19+           AGATGCACCGCTATCAGAACTAGGGCTGCGCTTCTTATCTTCGCCTTCTCTTCGATGCTC
JMFF027L22+           AGATGCACCGCTATCAGAACTAGGGCTGCGCTTCTTATCTTCGCCTTCTCTTCGATGCTC
JMFF031I02+           AGATGCACCGCTATCAGAACTAGGGCTGCGCTTCTTATCTTCGCCTTCTCTTCGATGCTC
                      ____________________________________________________________
consensus             AGATGCACCGCTATCAGAACTAGGGCTGCGCTTCTTATCTTCGCCTTCTCTTCGATGCTC
 
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JMFS103D09+           AGACCCACTCCTGCCTTTTTCTCTTTCAGCTTCTTCTTCTTCTTCATCATCACTAGAGCG
JMFF044L19+           AGACCCACTCCTGCCTTTTTCTCTTTCAGCTTCTTCTTCTTCTTCATCATCACTAGAGCG
JMFF027L22+           AGACCCACTCCTGCCTTTTTCTCTTTCAGCTTCTTCTTCTTCTTCATCATCACTAGAGCG
JMFF031I02+           AGACCCACTCCTGCCTTTTTCTCTTTCAGCTTCTTCTTCTTCTTCATCATCACTAGAGCG
                      ____________________________________________________________
consensus             AGACCCACTCCTGCCTTTTTCTCTTTCAGCTTCTTCTTCTTCTTCATCATCACTAGAGCG
 
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JMFS103D09+           ATGTCCGCCACGAATTTCACCTTCCTCATCTGAAGCACTGGAGTCAGAATGCTGATACTT
JMFF044L19+           ATGTCCGCCACGAATTTCACCTTCCTCATCTGAAGCACTGGAGTCAGAATGCTGATACTT
JMFF027L22+           ATGTCCGCCACGAATTTCACCTTCCTCATCTGAAGCACTGGAGTCAGAATGCTGATACTT
JMFF031I02+           ATGTCCGCCACGAATTTCACCTTCCTCATCTGAAGCACTGGAGTCAGAATGCTGATACTT
                      ____________________________________________________________
consensus             ATGTCCGCCACGAATTTCACCTTCCTCATCTGAAGCACTGGAGTCAGAATGCTGATACTT
 
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JMFS103D09+           CCGAGCCATAGCTTAAACCCTAAATCTCTCCACGCAGATCGAAATGGGTATGGGTTTGGG
JMFF044L19+           CCGAGCCATAGCTTAAACCCTAAATCTCTCCACGCAGATCGAAATGGGTATGGGTTTGGG
JMFF027L22+           CCGAGCCATAGCTTAAACCCTAAATCTCTCCACGCAGATCGAAATGGGTATGGGTTTGGG
JMFF031I02+           CCGAGCCATAGCTTAAACCCTAAATCTCTCCACGCAGATCGAAATGGGTATGGGTTTGGG
                      ____________________________________________________________
consensus             CCGAGCCATAGCTTAAACCCTAAATCTCTCCACGCAGATCGAAATGGGTATGGGTTTGGG
 
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JMFS103D09+           GTTCA                                                       
JMFF044L19+           GTTCACCGTGGCC                                               
JMFF027L22+           GTTCACCGTGGCCGGAGGGT                                        
JMFF031I02+           GTTCACCGTGGCCGGAGGGTTTCGAGGTTAAGCTAATTTTGGATCTTGCCTATAAAAAAT
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consensus             GTTCACCGTGGCCGGAGGGTTTCGAGGTTAAGCTAATTTTGGATCTTGCCTATAAAAAAT
 
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JMFF031I02+           GGGTTTTGGATTTGGGCTATCCTGATTCCTGAAAGAATTATGAAATTCTAAAATCCGCTC
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consensus             GGGTTTTGGATTTGGGCTATCCTGATTCCTGAAAGAATTATGAAATTCTAAAATCCGCTC