Contig 011574:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF031E08Sequence520011574 (3)ref|XP_011085729.1|2e-97PREDICTED: cyclin-U4-1 [Sesamum indicum]629011574 (3)emb|CDP09417.1|9e-81unnamed protein product [Coffea canephora]
JMFN030I22Sequence187011574 (3)gb|KDP22483.1|9e-19hypothetical protein JCGZ_26314 [Jatropha curcas]

Alignment

This contig is upended


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rJMFF031E08-                                    AATCAGATTACAAATCCCAAACCAGAGGGACAAA
                      ____________________________________________________________
consensus                                       AATCAGATTACAAATCCCAAACCAGAGGGACAAA
 
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rJMFF031E08-          AACACTAACTCTAACCTAATATACTACATTAACCAGAACAATTGAGCTCAAACAGCTAGT
                      ____________________________________________________________
consensus             AACACTAACTCTAACCTAATATACTACATTAACCAGAACAATTGAGCTCAAACAGCTAGT
 
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rJMFF031E08-          TGCTGTTGTTGTTGTTGTTGTTGATGGGAAGATTCATCATCATTGAAACATATGTATTGA
                      ____________________________________________________________
consensus             TGCTGTTGTTGTTGTTGTTGTTGATGGGAAGATTCATCATCATTGAAACATATGTATTGA
 
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rJMFF031E08-          TGTTGGGTTGGTGATCTACCACATAGGTTAGATTCTGCAAGATCTGACGGTGTAGGATGG
                      ____________________________________________________________
consensus             TGTTGGGTTGGTGATCTACCACATAGGTTAGATTCTGCAAGATCTGACGGTGTAGGATGG
 
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rJMFF031E08-          AGGAGCAACATCTCTCTCTGGAGGTGCAAACAGTAGGTCTGAAAAGTAGTGGGGGTCACA
JMFF031E08+                             TGGAGGTGCAAACAGTAGGTCTGAAAAGTAGTGGGGGTCACA
                      ____________________________________________________________
consensus             AGGAGCAACATCTCTCTCTGGAGGTGCAAACAGTAGGTCTGAAAAGTAGTGGGGGTCACA
 
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rJMFF031E08-          TTCAAGTGAAATCCCAATCCAAATAGGAAATCCACTTCAAGAAAGTTCATCTCTGTTGTG
JMFF031E08+           TTCAAGTGAAATCCCAATCCAAATAGGAAATCCACTTCAAGAAAGTTCATCTCTGTTGTG
                      ____________________________________________________________
consensus             TTCAAGTGAAATCCCAATCCAAATAGGAAATCCACTTCAAGAAAGTTCATCTCTGTTGTG
 
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rJMFF031E08-          CTGATTCCTCCTACCTTTGCATAGTATGCATTGTTGTAATACATATCATCCATGAATTTG
JMFF031E08+           CTGATTCCTCCTACCTTTGCATAGTATGCATTGTTGTAATACATATCATCCATGAATTTG
                      ____________________________________________________________
consensus             CTGATTCCTCCTACCTTTGCATAGTATGCATTGTTGTAATACATATCATCCATGAATTTG
 
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rJMFF031E08-          GCGGCGACCATGACGCTGGTGATGAGGAGGCGGTGGACGTTAAAGGAGTTGATGGGCAGC
JMFF031E08+           GCGGCGACCATGACGCTGGTGATGAGGAGGCGGTGGACGTTAAAGGAGTTGATGGGCAGC
                      ____________________________________________________________
consensus             GCGGCGACCATGACGCTGGTGATGAGGAGGCGGTGGACGTTAAAGGAGTTGATGGGCAGC
 
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rJMFF031E08-          GCCGGCTGGCGGTGAGTGAAGCGGTCGAGGTAAACGTAGGCGACGACGAAGCAGGAGGGG
JMFF031E08+           GCCGGCTGGCGGTGAGTGAAGCGGTCGAGGTAAACGTAGGCGACGACGAAGCAGGAGGGG
                      ____________________________________________________________
consensus             GCCGGCTGGCGGTGAGTGAAGCGGTCGAGGTAAACGTAGGCGACGACGAAGCAGGAGGGG
 
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rJMFF031E08-          CTACAATTGGCGTACTTGAAGATCCTCTCCAGGTAGGTCTGGACGGAGATTCCCGGGCCG
JMFN030I22+                                          GGTAGGTCTGGACGGAGATTCCGGG--CC
JMFF031E08+           CTACAATTGGCGTACTTGAAGATCCTCTCCAGGTAGGTCTGGACGGAGATTCCGGG--CC
                      ____________________________________________________________
consensus             CTACAATTGGCGTACTTGAAGATCCTCTCCAGGTAGGTCTGGACGGAGATTCCGGG--CC
 
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rJMFF031E08-          GGGTGANGCCGTGGAAGACGGAGATCTTCTGTGGCTGAAGCTTGGC              
JMFN030I22+           GGGTGAGGCCGTGGAAGACGGAGATGTTCTGTGGCTGAAGCTTGGCGGCGAGATCGTTCG
JMFF031E08+           GGGTGAGGCCGTGGAAGACGGAGATCTTCTGTGGCTGAAGCTTGGCGGCGAGATCGTTCG
                      ____________________________________________________________
consensus             GGGTGAGGCCGTGGAAGACGGAGATCTTCTGTGGCTGAAGCTTGGCGGCGAGATCGTTCG
 
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JMFN030I22+           AGTCGGCGACTCGCTGGAGGAGAGAGGAGAGGTAAGATATGAGTTTCGGCGTTACAGCCT
JMFF031E08+           AGTCGGCGACTCGCTGGAGGAGAGAGGAGAGGTAAGATATGAGTTTCGGCATTACAGCCT
                      ____________________________________________________________
consensus             AGTCGGCGACTCGCTGGAGGAGAGAGGAGAGGTAAGATATGAGTTTCGGCGTTACAGCCT
 
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JMFN030I22+           GGGCCTCCAGCTCCGCCATTGT                                      
JMFF031E08+           GGGCCTCCAGCTCCGCCATTGTTGCCTCAATGGAAAAGAAAAAAGAAGAATTTATGAATG
                      ____________________________________________________________
consensus             GGGCCTCCAGCTCCGCCATTGTTGCCTCAATGGAAAAGAAAAAAGAAGAATTTATGAATG