Contig 011572:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFF017K11+                                                           ATACAGCTCCAA
                      ____________________________________________________________
consensus                                                             ATACAGCTCCAA
 
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JMFF017K11+           AGCAAGGAAGCTCTTCTACAAGTGGACGAAAGATCAGCCTGAAAACCCCAGTAAAACCAA
JMSF045E23+                                                    AAAACCCCTGTAAACCCAA
                      ____________________________________________________________
consensus             AGCAAGGAAGCTCTTCTACAAGTGGACGAAAGATCAGCCTGAAAACCCCTGTAAACCCAA
 
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JMFF017K11+           TGTTTTTCACCTGCACTGGTAGTGCGACACCGAGGTAAGTCTTAATATCAAGTACTATAT
JMSF045E23+           TGTTTTTCACCTGCACAGGTAGTGCAACACCGAGATAAGTCTTAATATCAAGTATTATAC
                      ____________________________________________________________
consensus             TGTTTTTCACCTGCACTGGTAGTGCGACACCGAGGTAAGTCTTAATATCAAGTATTATAT
 
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JMFF017K11+           TAGGATTTCCATCCCATTGCATCTCTAACTCCATAGTAATACCATCACTTCCATCTTCGA
JMSF045E23+           TCGGATTTCCATCCCACTGCACCTGTAACTCGATGGTAATCCCTTCACTTCCATCTTCAA
                      ____________________________________________________________
consensus             TCGGATTTCCATCCCATTGCATCTGTAACTCGATGGTAATCCCTTCACTTCCATCTTCGA
 
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JMFF017K11+           CGATAGAAATCCCTGTAAATTGTGGAGCAACAGTGCCAAGAGTGAACTTTGAAAACTTCA
JMSF045E23+           TGATAGAAATTCCTGTGCACTGTGGGGCAACAGTACCAAGAGTGAACCTTGAAAATTTCA
                      ____________________________________________________________
consensus             TGATAGAAATTCCTGTGCATTGTGGGGCAACAGTGCCAAGAGTGAACTTTGAAAATTTCA
 
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JMFF017K11+           ATGAGGCTAAAACCACAGGTCGGTATGATTCCAGAACTGGCTCTACATTCATCTTAATCA
JMSF045E23+           ATGATGCCAAAATCACTGGCCTGTATGATTCCAGAACAGGCTCGACGTTCATCTTAATCA
                      ____________________________________________________________
consensus             ATGATGCTAAAATCACTGGTCTGTATGATTCCAGAACTGGCTCTACGTTCATCTTAATCA
 
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JMFF017K11+           A                                                           
JMSF045E23+           ACTCCGACGCCGCCTTCTGGTACTTAGAGAAGACAACCCAAGAAGGGTACTGGTCAGGGG
JMFF031C22+                                                CCAAGAAGGGTACTGGTCAGGGG
                      ____________________________________________________________
consensus             ACTCCGACGCCGCCTTCTGGTACTTAGAGAAGACAACCCAAGAAGGGTACTGGTCAGGGG
 
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JMSF045E23+           TGAAGATCTTTCTGGAATCTTCCACGCTCATTCTTGCATACGCCGCAACCGTAGTAGCCA
JMFF031C22+           TGAAGATCTTTCTGGAATCTTCCACGCTCATTCTTGCATACGCCGCAACCGTAGTAGCCA
                      ____________________________________________________________
consensus             TGAAGATCTTTCTGGAATCTTCCACGCTCATTCTTGCATACGCCGCAACCGTAGTAGCCA
 
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JMSF045E23+           GTTCACAACGGCGTTTGGACCGACTGTTTTCCGACTTCACAAACGCGATAACTAAAGCCA
JMFF031C22+           GTTCACAACGGCGTTTGGACCGACTGTTTTCCGACTTCACAAACGCGATAACTAAAGCCA
                      ____________________________________________________________
consensus             GTTCACAACGGCGTTTGGACCGACTGTTTTCCGACTTCACAAACGCGATAACTAAAGCCA
 
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JMSF045E23+           ACCCGAATGCGATTCCGATCACTATTCCAAACAAAAACGCCATCTTTGGGCCTCTGAAAG
JMFF031C22+           ACCCGAATGCGATTCCGATCACTATTCCAAACAAAAACGCCATCTTTGGGCCTCTGAAAG
                      ____________________________________________________________
consensus             ACCCGAATGCGATTCCGATCACTATTCCAAACAAAAACGCCATCTTTGGGCCTCTGAAAG
 
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JMSF045E23+           ACTCTATGGAGTGAATTGAAGTCCTTGGAAGAGTGAAGTGCTTTCTGGCGATTACTGATT
JMFF031C22+           ACTCTATGGAGTGAATTGAAGTCCTTGGAAGAGTGAAGTGCTTTCTGGCGATTACTGATT
                      ____________________________________________________________
consensus             ACTCTATGGAGTGAATTGAAGTCCTTGGAAGAGTGAAGTGCTTTCTGGCGATTACTGATT
 
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JMSF045E23+           ATGGGGTATTAGAGTTGGCGAAATGAGTGGATTTTGGTCGTTGTAATCAAAGGATTTGCG
JMFF031C22+           ATGGGGTATTAGAGTTGGCGAAATGAGTGGATTTTGGTCGTTGTAATCAAAGGATTTGCG
                      ____________________________________________________________
consensus             ATGGGGTATTAGAGTTGGCGAAATGAGTGGATTTTGGTCGTTGTAATCAAAGGATTTGCG
 
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JMSF045E23+           CGGCCAAAAGCGCGAATTCTGTT                                     
JMFF031C22+           CGGCCAAAAGCGCGAATTCTGTTGCCAGAAAGCGAAAAGATGAAAAGGATGCATGGCTGC
                      ____________________________________________________________
consensus             CGGCCAAAAGCGCGAATTCTGTTGCCAGAAAGCGAAAAGATGAAAAGGATGCATGGCTGC