Contig 011569:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF030F11Sequence495011569 (3)emb|CDP13025.1|2e-13unnamed protein product [Coffea canephora]654013821 (2)
JMFF045I16Sequence647011569 (3)emb|CDP13025.1|1e-28unnamed protein product [Coffea canephora]594013821 (2)
JMFN003H14Sequence614011569 (3)ref|XP_004241961.1|6e-30PREDICTED: extensin-like [Solanum lycopersicum]

Alignment

This contig is upended


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JMFN003H14+                GAAGTTGGGGACGGTTTATTGGCGTCAAGGGAGGGGGCTTAATCTTTTGCAACCT
JMFF045I16+                        GGACGGTTTATTGGCGTCAAGGGAGGGGGCTTAATCTTTTGCAACCT
                      ____________________________________________________________
consensus                  GAAGTTGGGGACGGTTTATTGGCGTCAAGGGAGGGGGCTTAATCTTTTGCAACCT
 
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JMFN003H14+           AGTATTTTGCGGTTTGGGAGCATTCGGGGGTCTAGGAGCAGGCTCACGCAAAGGCGAGCC
JMFF045I16+           AGTATTTGNCGGTTTGGGAGCATTCGGGGGTCTAGGAGCAGGCTCACGCAAAGGCGAGCC
                      ____________________________________________________________
consensus             AGTATTTTGCGGTTTGGGAGCATTCGGGGGTCTAGGAGCAGGCTCACGCAAAGGCGAGCC
 
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JMFN003H14+           CGTCAGCTGTTGAACTATGCTCCGGAAATCGTTCTTGTTTATATTGTAGACCTGCGGTTG
JMFF045I16+           CGTCAGCTGTTGAACTATGCTCCGGAAATCGTTCTTGTTTATATTGTAGACCTGCGGTTG
JMFF030F11+                                                        GTAGACCTGCGGTTG
                      ____________________________________________________________
consensus             CGTCAGCTGTTGAACTATGCTCCGGAAATCGTTCTTGTTTATATTGTAGACCTGCGGTTG
 
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JMFN003H14+           AGGTTGAGGCCGAGCACCCCCCGCATTAGCATTGCTGAAATTCGGTTGGTGTATCGGGCT
JMFF045I16+           AGGTTGAGGCCGAGCACCCCCCGCATTAGCATTGCTGAAATTCGGTTGGTGTATCGGGCT
JMFF030F11+           AGGTTGAGGCCGAGCACCCCCCGCATTAGCATTGCTGAAATTCGGTTGGTGTATCGGGCT
                      ____________________________________________________________
consensus             AGGTTGAGGCCGAGCACCCCCCGCATTAGCATTGCTGAAATTCGGTTGGTGTATCGGGCT
 
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JMFN003H14+           CTTCTTTATATTCTTCCCCATCTTATTCACCCCCAAAGTATCTGGATGTCTACCCATCTG
JMFF045I16+           CTTCTTTATATTCTTCCCCATCTTATTCACCCCCAAAGTATCTGGATGTCTACCCATCTG
JMFF030F11+           CTTCTTTATATTCTTCCCCATCTTATTCACCCCCAAAGTATCTGGATGTCTACCCATCTG
                      ____________________________________________________________
consensus             CTTCTTTATATTCTTCCCCATCTTATTCACCCCCAAAGTATCTGGATGTCTACCCATCTG
 
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JMFN003H14+           CCTATTAGAATTGTCCATTTCTCACAATCTCAAAGCCTTTCACTATGATCCAATCCAACG
JMFF045I16+           CCTATTTGAATTGTCCATTTCTCACAATCTCAAAGCCTTTCACTATGATCCAATCCAACG
JMFF030F11+           CCTATTTGAATTGTCCATTTCTCACAATCTCAAAGCCTTTCACTATGATCCAATCCAACG
                      ____________________________________________________________
consensus             CCTATTTGAATTGTCCATTTCTCACAATCTCAAAGCCTTTCACTATGATCCAATCCAACG
 
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JMFN003H14+           ATTTTCGCTAAACTTCCACTTCTTCTTTTTCTCCCACTCAACTTAACTACCAATCACAAA
JMFF045I16+           ATTTTCGCTAAACTTCCACTTCTTCTTTTTCTCCCACTCAACTTAACTACCAATCACAAA
JMFF030F11+           ATTTTCGCTAAACTTCCACTTCTTCTTTTTCTCCCACTCAACTTAACTACCAATCACAAA
                      ____________________________________________________________
consensus             ATTTTCGCTAAACTTCCACTTCTTCTTTTTCTCCCACTCAACTTAACTACCAATCACAAA
 
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JMFN003H14+           ACTTCAAATGCCATATAAACAGATGCAACAGCGTGATTCGCGGCTGTTGCGTCTGAATCT
JMFF045I16+           ACTTCAAATGCCATATAAACAGATGCAACAGCGTGATTCGCGGCTGTTGCGTCTGAATCT
JMFF030F11+           ACTTCAAATGCCATATAAACAGATGCAACAGCGTGATTCGCGGCTGTTGCGTCTGAATCT
                      ____________________________________________________________
consensus             ACTTCAAATGCCATATAAACAGATGCAACAGCGTGATTCGCGGCTGTTGCGTCTGAATCT
 
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JMFN003H14+           CAACCTGCTCCTCCTCCTCCTTCCGCAGATTCTTTCCGGTGAGGCGGTGGCTGCTCTGAA
JMFF045I16+           CAACCTGCTCCTCCTCCTCCTTCCGCAGATTCTTTCCGGTGAGGCGGTGGCTGCTCTGAA
JMFF030F11+           CAACCTGCTCCTCCTCCTCCTTCCGCAGATTCTTTCCGGTGAGGCGGTGGCTGCTCTGAA
                      ____________________________________________________________
consensus             CAACCTGCTCCTCCTCCTCCTTCCGCAGATTCTTTCCGGTGAGGCGGTGGCTGCTCTGAA
 
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JMFN003H14+           TCGAGGGAGGCGGCGATGAGCGGTGGGTCAACGATGGAACGGTGGAACGCAGATTGAAAA
JMFF045I16+           TCGAGGGAGGCGGCGATGAGCGGTGGGTCAACGATGGAACGGTGGAACGCAGATTGAAAA
JMFF030F11+           TCGAGGGAGGCGGCGATGAGCGGTGGGTCAACGATGGAACGGTGGAACGCAGATTGAAAA
                      ____________________________________________________________
consensus             TCGAGGGAGGCGGCGATGAGCGGTGGGTCAACGATGGAACGGTGGAACGCAGATTGAAAA
 
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JMFN003H14+           AAGGTTGCGAGCGAGAGCG                                         
JMFF045I16+           AAGGTTGCGAGCGAGAGCGAAAAAACGAAAAGAAAACAAAAAACCACAAAAAAATGAAAC
JMFF030F11+           AAGGTTGCGAGCGAGAGCGAAAAAACGAAAAGAAAACAAAAAACCACAAAAAAATGAAAC
                      ____________________________________________________________
consensus             AAGGTTGCGAGCGAGAGCGAAAAAACGAAAAGAAAACAAAAAACCACAAAAAAATGAAAC