| clone | 5'-sequence | 3'-sequence | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| Seq. | length | contig | BestHit | Evalue | description | length | contig | BestHit | Evalue | description | |
| JMFF025L15 | Sequence | 544 | 011566 (7) | ref|XP_011005940.1| | 5e-16 | PREDICTED: squamosa promoter-binding-like protein 1 isoform X2 [Populus euphrat | 814 | 007672 (5) | ref|XP_009773067.1| | 2e-77 | PREDICTED: squamosa promoter-binding-like protein 1 [Nicotiana sylvestris] |
| JMFF029M23 | Sequence | 490 | 011566 (7) | gb|EYU46873.1| | 3e-06 | hypothetical protein MIMGU_mgv1a000744mg [Erythranthe guttata] | 507 | 007672 (5) | gb|KDP28324.1| | 3e-28 | hypothetical protein JCGZ_14095 [Jatropha curcas] |
| JMFS047D04 | Sequence | 638 | 011566 (7) | gb|EYU46873.1| | 3e-22 | hypothetical protein MIMGU_mgv1a000744mg [Erythranthe guttata] | |||||
| JMFS055C10 | Sequence | 627 | 011566 (7) | gb|EYU46873.1| | 2e-22 | hypothetical protein MIMGU_mgv1a000744mg [Erythranthe guttata] | |||||
| JMFS058E08 | Sequence | 610 | 011566 (7) | gb|EYU46873.1| | 2e-22 | hypothetical protein MIMGU_mgv1a000744mg [Erythranthe guttata] | |||||
| JMFS074C10 | Sequence | 627 | 011566 (7) | gb|EYU46873.1| | 2e-22 | hypothetical protein MIMGU_mgv1a000744mg [Erythranthe guttata] | |||||
| JMFS124D06 | Sequence | 571 | 011566 (7) | gb|EYU46873.1| | 2e-21 | hypothetical protein MIMGU_mgv1a000744mg [Erythranthe guttata] | |||||
This contig is upended
. : . : . : . : . : . :
JMFS074C10+ TTTACTTCATCGGAGCAAGAGGAGGAACTATTGGAGGTGGATGACACCACGGCT
JMFS058E08+ AGGAACTATTGGAGGTGGATGACACCACGGCT
JMFS047D04+ TTCATCGGAGCAAGAGAAGGAACTATTGGAGGTGGATGACACCACGGCT
____________________________________________________________
consensus TTTACTTCATCGGAGCAAGAGGAGGAACTATTGGAGGTGGATGACACCACGGCT
. : . : . : . : . : . :
JMFS074C10+ GTGGAGATTCCAGTTTCAAGTGGGAAAAACTGCCTGCTCTGGTAATTTGATGATGGGTTG
JMFS055C10+ GATTCCAGTTTCAAGTGGGAAAAACTGCCTGCTCTGGTAATTTGATGATGGGTTG
JMFS058E08+ GTGGAGATTCCAGTTTCAAGTGGGAAAAACTGCCTGCTCTGGTAATTTGATGATGGGTTG
JMFS124D06+ GAGATTCCAGTTCNAAGTGGGAANAACTGCCTGCTCTGGTAATTTGATGATGGGTTG
JMFS047D04+ GTGGAGATTCCAGTTTCAAGTGGGAAAAACTGCCTGCTCTGGTAATTTGATGATGGGTTG
JMFF025L15+ CTGGTAATTTGATGATGGGTTG
____________________________________________________________
consensus GTGGAGATTCCAGTTTCAAGTGGGAAAAACTGCCTGCTCTGGTAATTTGATGATGGGTTG
. : . : . : . : . : . :
JMFS074C10+ GGATTGAGAGGTCTGGCAAGGAAAAGATGGCCATCCCATTTCCAATCACTGGGATCCCAC
JMFS055C10+ GGATTGAGAGGTCTGGCAAGGAAAAGATGGCCATCCCATTTCCAATCACTGGGATCCCAC
JMFS058E08+ GGATTGAGAGGTCTGGCAAGGAAAAGATGGCCATCCCATTTCCAATCACTGGGATCCCAC
JMFS124D06+ GGATTGAGAGGTCTGGCAAGGAAAAGATGGCCATCCCATTTCCAATCACTGGGATCCCAC
JMFS047D04+ GGATTGAGAGGTCTGGCAAGGAAAAGATGGCCATCCCATTTCCAATCACTGGGATCCCAC
JMFF025L15+ GGATTGAGAGGTCTGGCAAGGAAAAGATGGCCATCCCATTTCCAATCACTGGGATCCCAC
JMFF029M23+ GGGATCCCAC
____________________________________________________________
consensus GGATTGAGAGGTCTGGCAAGGAAAAGATGGCCATCCCATTTCCAATCACTGGGATCCCAC
. : . : . : . : . : . :
JMFS074C10+ TCCAGACTCCTTTTCCCCACCGCTCTCAAATCCGCTGCACCCAAATCATAAAAGAGTTGA
JMFS055C10+ TCCAGACTCCTTTTCCCCACCGCTCTCAAATCCGCTGCACCCAAATCATAAAAGAGTTGA
JMFS058E08+ TCCAGACTCCTTTTCCCCACCGCTCTCAAATCCGCTGCACCCAAATCATAAAAGAGTTGA
JMFS124D06+ TCCAGACTCCTTTTCCCCACCGCTCTCAAATCCGCTGCACCCAAATCATAAAAGAGTTGA
JMFS047D04+ TCCAGACTCCTTTTCCCCACCGCTCTCAAATCCGCTGCACCCAAATCATAAAAGAGTTGA
JMFF025L15+ TCCAGACTCCTTTTCCCCACCGCTCTCAAATCCGCTGCACCCAAATCATAAAAGAGTTGA
JMFF029M23+ TCCAGACTCCTTTTCCCCACCGCTCTCAAATCCGCTGCACCCAAATCATAAAAGAGTTGA
____________________________________________________________
consensus TCCAGACTCCTTTTCCCCACCGCTCTCAAATCCGCTGCACCCAAATCATAAAAGAGTTGA
. : . : . : . : . : . :
JMFS074C10+ GCTTGACCTCCAATTCTGGCCTCCATTTATGGGATTACCAGATTTCCAACACTCTAATAT
JMFS055C10+ GCTTGACCTCCAATTCTGGCCTCCATTTATGGGATTACCAGATTTCCAACACTCTAATAT
JMFS058E08+ GCTTGACCTCCAATTCTGGCCTCCATTTATGGGATTACCAGATTTCCAACACTCTAATAT
JMFS124D06+ GCTTGACCTCCAATTCTGGCCTCCATTTATGGGATTACCAGATTTCCAACACTCTAATAT
JMFS047D04+ GCTTGACCTCCAATTCTGGCCTCCATTTATGGGATTACCAGATTTCCAACACTCTAATAT
JMFF025L15+ GCTTGACCTCCAATTCTGGCCTCCATTTATGGGATTACCAGATTTCCAACACTCTAATAT
JMFF029M23+ GCTTGACCTCCAATTCTGGCCTCCATTTATGGGATTACCAGATTTCCAACACTCTAATAT
____________________________________________________________
consensus GCTTGACCTCCAATTCTGGCCTCCATTTATGGGATTACCAGATTTCCAACACTCTAATAT
. : . : . : . : . : . :
JMFS074C10+ TGATAAAAGCCCCCAAAATACTATAAAGAAAGAAAATTAAAAAAGTCGAAATCTTTTAGC
JMFS055C10+ TGATAAAAGCCCCCAAAATACTATAAAGAAAGAAAATTAAAAAAGTCGAAATCTTTTAGC
JMFS058E08+ TGATAAAAGCCCCCAAAATACTATAAAGAAAGAAAATTAAAAAAGTCGAAATCTTTTAGC
JMFS124D06+ TGATAAAAGCCCCCAAAATACTATAAAGAAAGAAAATTAAAAAAGTCGAAATCTTTTAGC
JMFS047D04+ TGATAAAAGCCCCCAAAATACTATAAAGAAAGAAAATTAAAAAAGTCGAAATCTTTTAGC
JMFF025L15+ TGATAAAAGCCCCCAAAATACTATAAAGAAAGAAAATTAAAAAAGTCGAAATCTTTTAGC
JMFF029M23+ TGATAAAAGCCCCCAAAATACTATAAAGAAAGAAAATTAAAAAAGTCGAAATCTTTTAGC
____________________________________________________________
consensus TGATAAAAGCCCCCAAAATACTATAAAGAAAGAAAATTAAAAAAGTCGAAATCTTTTAGC
. : . : . : . : . : . :
JMFS074C10+ AGGCACAACAGATCAGAGTCGAAAATTCCCAAATCTCAGCCAAAAGGAGAAAGACCTTAA
JMFS055C10+ AGGCACAACAGATCAGAGTCGAAAATTCCCAAATCTCAGCCAAAAGGAGAAAGACCTTAA
JMFS058E08+ AGGCACAACAGATCAGAGTCGAAAATTCCCAAATCTCAGCCAAAAGGAGAAAGACCTTAA
JMFS124D06+ AGGCACAACAGATCAGAGTCGAAAATTCCCAAATCTCAGCCAAAAGGAGAAAGACCTTAA
JMFS047D04+ AGGCACAACAGATCAGAGTCGAAAATTCCCAAATCTCAGCCAAAAGGAGAAAGACCTTAA
JMFF025L15+ AGGCACAACAGATCAGAGTCGAAAATTCCCAAATCTCAGCCAAAAGGAGAAAGACCTTAA
JMFF029M23+ AGGCACAACAGATCAGAGTCGAAAATTCCCAAATCTCAGCCAAAAGGAGAAAGACCTTAA
____________________________________________________________
consensus AGGCACAACAGATCAGAGTCGAAAATTCCCAAATCTCAGCCAAAAGGAGAAAGACCTTAA
. : . : . : . : . : . :
JMFS074C10+ ATGAAGCTAATCGGCCTCAGTTCGGCCCCAGAAGTCAAGAAACACTACAGAAATAGATCC
JMFS055C10+ ATGAAGCTAATCGGCCTCAGTTCGGCCCCAGAAGTCAAGAAACACTACAGAAATAGATCC
JMFS058E08+ ATGAAGCTAATCGGCCTCAGTTCGGCCCCAGAAGTCAAGAAACACTACAGAAATAGATCC
JMFS124D06+ ATGAAGCTAATCGGCCTCAGTTCGGCCCCAGAAGTCAAGAAACACTACAGAAATAGATCC
JMFS047D04+ ATGAAGCTAATCGGCCTCAGTTCGGCCCCAGAAGTCAAGAAACACTACAGAAATAGATCC
JMFF025L15+ ATGAAGCTAATCGGCCTCAGTTCGGCCCCAGAAGTCAAGAAACACTACAGAAATAGATCC
JMFF029M23+ ATGAAGCTAATCGGCCTCAGTTCGGCCCCAGAAGTCAAGAAACACTACAGAAATAGATCC
____________________________________________________________
consensus ATGAAGCTAATCGGCCTCAGTTCGGCCCCAGAAGTCAAGAAACACTACAGAAATAGATCC
. : . : . : . : . : . :
JMFS074C10+ ATGGTTCCAATTAAGAGCTACCCACATGCCCGTCTCCTAATTAAATTTTGAAAAAGCTCA
JMFS055C10+ ATGGTTCCAATTAAGAGCTACCCACATGCCCGTCTCCTAATTAAATTTTGAAAAAGCTCA
JMFS058E08+ ATGGTTCCAATTAAGAGCTACCCACATGCCCGTCTCCTAATTAAATTTTGAAAAAGCTCA
JMFS124D06+ ATGGTTCCAATTAAGAGCTACCCACATGCCCGTCTCCTAATTAAATTTTGAAAAAGCTCA
JMFS047D04+ ATGGTTCCAATTAAGAGCTACCCACATGCCCGTCTCCTAATTAAATTTTGAAAAAGCTCA
JMFF025L15+ ATGGTTCCAATTAAGAGCTACCCACATGCCCGTCTCCTAATTAAATTTTGAAAAAGCTCA
JMFF029M23+ ATGGTTCCAATTAAGAGCTACCCACATGCCCGTCTCCTAATTAAATTTTGAAAAAGCTCA
____________________________________________________________
consensus ATGGTTCCAATTAAGAGCTACCCACATGCCCGTCTCCTAATTAAATTTTGAAAAAGCTCA
. : . : . : . : . : . :
JMFS074C10+ AATCCGCTCAGTCTTGATAACGAACTG--------CAGGAACGACCGAGATAAGGATGGA
JMFS055C10+ AATCCGCTCAGTCTTGATAACGAA
JMFS058E08+ AATCCGCTCAGTCTTGATAACGAACTGCCTCCATACAGGAACGACCGAGATAAGGATGGA
JMFS124D06+ AATCCGCTCAGTCTTGATAACGAACTGCCTCCATACAGGAACGACCGAGATAAGGATGGA
JMFS047D04+ AATCCGCTCAGTCTTGATAACGAACTGCCTCCATACAGGAACGACCGAGATAAGGATGGA
JMFF025L15+ AATCCGCTCAGTCTTGATAACGAA------------AGGAACGACCGAGATAAGGATGGA
JMFF029M23+ AATCCGCTCAGTCTTGATAACGAACTGCCTCCATACAGGAACGACCGAGATAAGGATGGA
____________________________________________________________
consensus AATCCGCTCAGTCTTGATAACGAACTGCCTCCATACAGGAACGACCGAGATAAGGATGGA
. : . : . : . : . : . :
JMFS074C10+ CGGAAAGCGGCGAACGGCGGGGAGTTGGGCAGAGGATGGTT
JMFS058E08+ CGGAAAGCGGCGAACGGCGGGGAGTTGGGCAGAGGA
JMFS124D06+ CGGAAAGCGGCGAACGGCGGGGAGTTGGGCAGAG
JMFS047D04+ CGGAAAGCGGCGAACGGCGGGGAGTTGGGCAGAGGATGGTTGTAGCTAA
JMFF025L15+ CGGAAAGCGGCGAACGGCGGGGAGTTGGGCAGAGGATGGTTGTAGCTAAAGCCT
JMFF029M23+ CGGAAAGCGGCGAACGGCGGGGAGTTGGGCAGAGGATGGTTGTAGCTAAAGCCTCGAGGT
____________________________________________________________
consensus CGGAAAGCGGCGAACGGCGGGGAGTTGGGCAGAGGATGGTTGTAGCTAAAGCCTCGAGGT