Contig 011564:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF029D04Sequence515011564 (2)ref|XP_010276645.1|2e-44PREDICTED: ankyrin repeat-containing protein P16F5.05c [Nelumbo nucifera]686011564 (2)ref|XP_009801459.1|9e-67PREDICTED: GA-binding protein subunit beta-2 [Nicotiana sylvestris]

Alignment

This contig is upended


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rJMFF029D04-                                                                AGGGAG
                      ____________________________________________________________
consensus                                                                   AGGGAG
 
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rJMFF029D04-          AATATTATATATTAGTTTGTCTTGGTAAGTTGGTATTGAATAAACTGAATAAAAGAAGTT
                      ____________________________________________________________
consensus             AATATTATATATTAGTTTGTCTTGGTAAGTTGGTATTGAATAAACTGAATAAAAGAAGTT
 
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rJMFF029D04-          TCTTCCCCAACTTCTTCGCTCTCGCACTATTCTCAGTAACCATAGGAATCCATCTTCTAA
                      ____________________________________________________________
consensus             TCTTCCCCAACTTCTTCGCTCTCGCACTATTCTCAGTAACCATAGGAATCCATCTTCTAA
 
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rJMFF029D04-          ACACTGACAAACCAATACCAGTGTGGTTTTAAGAAACCGTTGCACCCGAAAGTTCAAGCT
                      ____________________________________________________________
consensus             ACACTGACAAACCAATACCAGTGTGGTTTTAAGAAACCGTTGCACCCGAAAGTTCAAGCT
 
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rJMFF029D04-          GTGCCACTGCCTGGTTGATTGCATCAATCACATCCACTTTCCCTCCGCTTACTGCTTCAT
                      ____________________________________________________________
consensus             GTGCCACTGCCTGGTTGATTGCATCAATCACATCCACTTTCCCTCCGCTTACTGCTTCAT
 
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rJMFF029D04-          CCATGGGGGTTCTCTCATGGCTATTTAGCGCCGAGACATTGGCTCCAGCAAGAATCAAGC
JMFF029D04+                                    TAGCGCCGAGACATTGGCTCCAGCAAGAATCAAGC
                      ____________________________________________________________
consensus             CCATGGGGGTTCTCTCATGGCTATTTAGCGCCGAGACATTGGCTCCAGCAAGAATCAAGC
 
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rJMFF029D04-          TCTTGACAACCTCGACATGCCCGTTAAGACAAGCCCAATGAAGAGGTGTATTTTTCTCCT
JMFF029D04+           TCTTGACAACCTCGACATGCCCGTTAAGACAAGCCCAATGAAGAGGTGTATTTTTCTCCT
                      ____________________________________________________________
consensus             TCTTGACAACCTCGACATGCCCGTTAAGACAAGCCCAATGAAGAGGTGTATTTTTCTCCT
 
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rJMFF029D04-          CGTTAGAAGCATTGACATCTACTTCATTGCGAATAAGGTAGTCTACAATGTCAGAATGCC
JMFF029D04+           CGTTAGAAGCATTGACATCTACTTCATTGCGAATAAGGTAGTCTACAATGTCAGAATGCC
                      ____________________________________________________________
consensus             CGTTAGAAGCATTGACATCTACTTCATTGCGAATAAGGTAGTCTACAATGTCAGAATGCC
 
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rJMFF029D04-          CATTAGCAGAAGCCATATGCAGTGCAGTTCGGCCCTGTGAATCCTTTGAATTGAGAGACA
JMFF029D04+           CATTAGCAGAAGCCATATGCAGTGCAGTTCGGCCCTGTGAATCCTTTGAATTGAGAGACA
                      ____________________________________________________________
consensus             CATTAGCAGAAGCCATATGCAGTGCAGTTCGGCCCTGTGAATCCTTTGAATTGAGAGACA
 
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rJMFF029D04-          CGCCGGAGGATACTAAGCTCACTATATCTTCAATATCATTATACCTTGCAGCCTCAAGCA
JMFF029D04+           CGCCGGAGGATACTAAGCTCACTATATCTTCAATATCATTATACCTTGCAGCCTCAAGCA
                      ____________________________________________________________
consensus             CGCCGGAGGATACTAAGCTCACTATATCTTCAATATCATTATACCTTGCAGCCTCAAGCA
 
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rJMFF029D04-          AGGCTTCAATGGTTTCCGGCATTGTTTCATGAGAACTTCTCTCAGCTGTATCCAGCACAC
JMFF029D04+           AGGCTTCAATGGTTTCCGGCATTGTTTCATGAGAACTTCTCTCAGCTGTATCCAGCACAC
                      ____________________________________________________________
consensus             AGGCTTCAATGGTTTCCGGCATTGTTTCATGAGAACTTCTCTCAGCTGTATCCAGCACAC
 
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rJMFF029D04-          GTTCCAACCCCATTCCTGAACTTAGTTGGCAGTGTAATTGCGGCAGAAGAAATGAGGGAG
JMFF029D04+           GTTCCAACCCCATTCCTGAACTTAGTTGGCAGTGTAATTGCGGCAGAAGAAATGAGGGAG
                      ____________________________________________________________
consensus             GTTCCAACCCCATTCCTGAACTTAGTTGGCAGTGTAATTGCGGCAGAAGAAATGAGGGAG
 
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rJMFF029D04-          TAGTACACTAGTACTGTTGT                                        
JMFF029D04+           TAGTACACTAGTACTGTTGTCGCCGTTCGCCGGAGATAATATGAAGTCGTCGCTGTTGGC
                      ____________________________________________________________
consensus             TAGTACACTAGTACTGTTGTCGCCGTTCGCCGGAGATAATATGAAGTCGTCGCTGTTGGC
 
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JMFF029D04+           CGGTCGTCCACTCGTCCCTGCGTCCGACGGCTGCGTAGAGGTGGAATAGCCGAATAGAAT
                      ____________________________________________________________
consensus             CGGTCGTCCACTCGTCCCTGCGTCCGACGGCTGCGTAGAGGTGGAATAGCCGAATAGAAT