Contig 011560:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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rJMFF027P03-                           AAAAATCACCTTTAGAAGTTAACAAACTGTTAAAGATGACAAA
                      ____________________________________________________________
consensus                              AAAAATCACCTTTAGAAGTTAACAAACTGTTAAAGATGACAAA
 
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rJMFF027P03-          AAGAAGAAGAGGGTTGACACACAGAATTTAGACCAATTCCACAGCCAAAAAGAGAGACAG
                      ____________________________________________________________
consensus             AAGAAGAAGAGGGTTGACACACAGAATTTAGACCAATTCCACAGCCAAAAAGAGAGACAG
 
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rJMFF027P03-          AATCCCTTCCCACTTCCTCACTAAGCCATAAAAACCACAAGACTAGTAGTTTGCTTCCTC
                      ____________________________________________________________
consensus             AATCCCTTCCCACTTCCTCACTAAGCCATAAAAACCACAAGACTAGTAGTTTGCTTCCTC
 
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rJMFF027P03-          CTCCCTCCATCAATCCCACCACCCTAGCTTACATCATTTCTTGCGACCGCCTTACACATC
JMFN011K24+                                       TTACATCATTTCTTGCGACCGCCTTACACATC
                      ____________________________________________________________
consensus             CTCCCTCCATCAATCCCACCACCCTAGCTTACATCATTTCTTGCGACCGCCTTACACATC
 
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rJMFF027P03-          GACTCACCTTTTTCCTGAATTCATCGCGGTTTTCCCTCCATTCTTTAGCAGCTTCCACGT
JMFN011K24+           GACTCACCTTTTTCCTGAATTCATCGCGGTTTTCCCTCCATTCTTTAGCAGCTTCCACGT
                      ____________________________________________________________
consensus             GACTCACCTTTTTCCTGAATTCATCGCGGTTTTCCCTCCATTCTTTAGCAGCTTCCACGT
 
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rJMFF027P03-          TTGCAGGTGACTCGTCGTTAGGACTTGAAAGCATTGATATGATGCTTAGAACGATACTCT
JMFN011K24+           TTGCAGGTGACTCGTCGTTAGGACTTGAAAGCATTGATATGATGCTTAGAACGATACTCT
                      ____________________________________________________________
consensus             TTGCAGGTGACTCGTCGTTAGGACTTGAAAGCATTGATATGATGCTTAGAACGATACTCT
 
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rJMFF027P03-          CCACCGTGTGGACAGGAGACCAGCGCTCGCTAGCAAGCTCATAACCGTTTGGATCATCAC
JMFN011K24+           CCACCGTGTGGACAGGAGACCAGCGCTCGCTAGCAAGCTCATAACCGTTTGGATCATCAC
JMFF027P03+                                                                      C
                      ____________________________________________________________
consensus             CCACCGTGTGGACAGGAGACCAGCGCTCGCTAGCAAGCTCATAACCGTTTGGATCATCAC
 
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rJMFF027P03-          CCGGAGGGTGAAGAATAGAGATGCAAACCTTGCCATCCGAGTATACATTAGGATGCCATA
JMFN011K24+           CCGGAGGGTGAAGAATAGAGATGCAAACCTTGCCATCCGAGTATACATTAGGATGCCATA
JMFF027P03+           CCGGAGGGTGAAGAATAGAGATGCAAACCTTGCCATCCGAGTATACATTAGGATGCCATA
                      ____________________________________________________________
consensus             CCGGAGGGTGAAGAATAGAGATGCAAACCTTGCCATCCGAGTATACATTAGGATGCCATA
 
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rJMFF027P03-          ATTCCGAGGTAAATTTGACTGTTGGAGGACTATTTGGATAATTTTGCGGAAAACTCATAA
JMFN011K24+           ATTCCGAGGTAAATTTGACTGTTGGAGGACTATTTGGATAATTTTGCGGAAAACTCATAA
JMFF027P03+           ATTCCGAGGTAAATTTGACTGTTGGAGGACTATTTGGATAATTTTGCGGAAAACTCATAA
                      ____________________________________________________________
consensus             ATTCCGAGGTAAATTTGACTGTTGGAGGACTATTTGGATAATTTTGCGGAAAACTCATAA
 
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rJMFF027P03-          TGGCATTGAAGAACCCCCCTTCATATAAGGTATCAGGTGGTCCAATAATGGTAACACTCC
JMFN011K24+           TGGCATTGAAAAACCCCCCTTCATATAAGGTATCAGGTGGTCCAATAATGGTAACACTCC
JMSF014O19+                      AACCCCCCTTCATATAAGGTATCAGGTGGTCCAATAATGGTAACACTCC
JMFF027P03+           TGGCATTGAAGAACCCCCCTTCATATAAGGTATCAGGTGGTCCAATAATGGTAACACTCC
                      ____________________________________________________________
consensus             TGGCATTGAAGAACCCCCCTTCATATAAGGTATCAGGTGGTCCAATAATGGTAACACTCC
 
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rJMFF027P03-          ATTCAAAAAGGTTGTTTTCGTCGACCAACCCAGCAGAAAACCCATCAACAGGGTTCTTAC
JMFN011K24+           ATTCAAAAAGGTTGTTTTCGTCGACCAACCCAGCAGAAAACCCTTCAACAGGGTTCTTAC
JMSF014O19+           ATTCAAAAAGGTTGTTTTCGTCGACCAACCCAGCAGAAAACCCATCAACAGGGTTCTTAC
JMFF027P03+           ATTCAAAAAGGTTGTTTTCGTCGACCAACCCAGCAGAAAACCCATCAACAGGGTTCTTAC
                      ____________________________________________________________
consensus             ATTCAAAAAGGTTGTTTTCGTCGACCAACCCAGCAGAAAACCCATCAACAGGGTTCTTAC
 
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rJMFF027P03-          AGAGATCTTTAAGCTGCTTCTGCAAGAGGAGAATAGCTTGGGAAGGAGAAGAGGAAGCCA
JMFN011K24+           AGAGATCTTTAAGCTGCTTCTGCAAGAGGAGAATAGCTTGGGAAGGAGAAGAGGAAGCCA
JMSF014O19+           AGAGATCTTTAAGCTGCTTCTGCAAGAGGAGAATAGCTTGGGAATGAGAAGAGGAAGCCA
JMFF027P03+           AGAGATCTTTAAGCTGCTTCTGCAAGAGGAGAATAGCTTGGGAAGGAGAAGAGGAAGCCA
                      ____________________________________________________________
consensus             AGAGATCTTTAAGCTGCTTCTGCAAGAGGAGAATAGCTTGGGAAGGAGAAGAGGAAGCCA
 
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rJMFF027P03-          TCAGAGAGCTACAGA                                             
JMFN011K24+           TCAGAGAGCTACAGAGGAGGGAGAAGACGATATTTTGA                      
JMSF014O19+           TCAGAGAGCTACAGAGGAGGGAGAAGACGATATTTTGAAGATTGGGGAAGAAAGTTCTAG
JMFF027P03+           TCAGAGAGCTACAGAGGAGGGAGAAGACGATATTTTGAAGATTGGGGAAGAAAGTTCTAG
                      ____________________________________________________________
consensus             TCAGAGAGCTACAGAGGAGGGAGAAGACGATATTTTGAAGATTGGGGAAGAAAGTTCTAG
 
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JMSF014O19+           ATAAAGC                                                     
JMFF027P03+           ATAAAGCGGGTGGAAGGAATAGAGAATCAGAGATTTATAAGGGTTGTAATAGGGTATTAG
                      ____________________________________________________________
consensus             ATAAAGCGGGTGGAAGGAATAGAGAATCAGAGATTTATAAGGGTTGTAATAGGGTATTAG
 
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JMFF027P03+           CGGCGCAATTGCCTTATAAGATAACGATGATCATGCCCACAACCACATACAATGGTTTAG
                      ____________________________________________________________
consensus             CGGCGCAATTGCCTTATAAGATAACGATGATCATGCCCACAACCACATACAATGGTTTAG
 
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JMFF027P03+           AAACCAAGGGGGGGAAAAAGAGTTTCCAATTCCCTGTACTTGGTGTGTTTGGAGTCAAAT
                      ____________________________________________________________
consensus             AAACCAAGGGGGGGAAAAAGAGTTTCCAATTCCCTGTACTTGGTGTGTTTGGAGTCAAAT