Contig 011559:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF027N17Sequence523011559 (2)ref|XP_009629646.1|127PREDICTED: uncharacterized protein LOC104119770 [Nicotiana tomentosiformis]709011559 (2)ref|XP_009629646.1|196PREDICTED: uncharacterized protein LOC104119770 [Nicotiana tomentosiformis]

Alignment

This contig is upended


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rJMFF027N17-                                        GAACAACAAAATATTATTACAAGGGTTCAA
                      ____________________________________________________________
consensus                                           GAACAACAAAATATTATTACAAGGGTTCAA
 
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rJMFF027N17-          TCTGACAAGTGTATATGATCTAGTAGCTTAATTAGTGTCCAAACTATATATATGGTGAGC
                      ____________________________________________________________
consensus             TCTGACAAGTGTATATGATCTAGTAGCTTAATTAGTGTCCAAACTATATATATGGTGAGC
 
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rJMFF027N17-          ACCAATAAATGGGCTTTGATGCTGAATTATACATACCACCTCTTCATTGAGATAGCGGGT
                      ____________________________________________________________
consensus             ACCAATAAATGGGCTTTGATGCTGAATTATACATACCACCTCTTCATTGAGATAGCGGGT
 
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rJMFF027N17-          TTGCAGAACGAAAGCACTCTTTCGTTCGCCCATAGTAGATTGGTTTGGTGCCAGGATATG
                      ____________________________________________________________
consensus             TTGCAGAACGAAAGCACTCTTTCGTTCGCCCATAGTAGATTGGTTTGGTGCCAGGATATG
 
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rJMFF027N17-          TTACAAAATTCCACCCAAACGCTGATCCACCAACAATATACGTCCCCTGATCAAGATCGT
                      ____________________________________________________________
consensus             TTACAAAATTCCACCCAAACGCTGATCCACCAACAATATACGTCCCCTGATCAAGATCGT
 
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rJMFF027N17-          CTACAGTTTGCTGGCTTGGGGAGAGATTTCCCGATAATACTGGCTTATCTTCAGAAGGTT
                      ____________________________________________________________
consensus             CTACAGTTTGCTGGCTTGGGGAGAGATTTCCCGATAATACTGGCTTATCTTCAGAAGGTT
 
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rJMFF027N17-          TGGCGGATTGTCTCTCTGGTGGAGGCTTCTCCACGGGTTTCTGTCCATCCCGCGTATCTC
JMFF027N17+                            GGTGGAGGCTTCTCCACGGGTTTCTGTCCATCCCGCGTATCTC
                      ____________________________________________________________
consensus             TGGCGGATTGTCTCTCTGGTGGAGGCTTCTCCACGGGTTTCTGTCCATCCCGCGTATCTC
 
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rJMFF027N17-          CTAACAAATTATGGCCTTCAGCTGCCTTCTTAAGTTTCTCTGGCGGTGGTGCTTCTGCTG
JMFF027N17+           CTAACAAATTATGGCCTTCAGCTGCCTTCTTAAGTTTCTCTGGCGGTGGTGCTTCTGCTG
                      ____________________________________________________________
consensus             CTAACAAATTATGGCCTTCAGCTGCCTTCTTAAGTTTCTCTGGCGGTGGTGCTTCTGCTG
 
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rJMFF027N17-          TCGTCTCTTTGTAAAGATCCATCAAAAGATTCAGCTGTTGACGAATTTCAGTAGCAGCCT
JMFF027N17+           TCGTCTCTTTGTAAAGATCCATCAAAAGATTCAGCTGTTGACGAATTTCAGTAGCAGCCT
                      ____________________________________________________________
consensus             TCGTCTCTTTGTAAAGATCCATCAAAAGATTCAGCTGTTGACGAATTTCAGTAGCAGCCT
 
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rJMFF027N17-          TGCAATTCCGGAAGTCTGGACTACGGAGAACCTCAATGACATGGGGTCGAAGTTCTTTGA
JMFF027N17+           TGCAATTCCGGAAGTCTGGACTACGGAGAACCTCAATGACATGGGGTCGAAGTTCTTTGA
                      ____________________________________________________________
consensus             TGCAATTCCGGAAGTCTGGACTACGGAGAACCTCAATGACATGGGGTCGAAGTTCTTTGA
 
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rJMFF027N17-          CTATGGCTCGCATCTTGAAGTAAGGAGTGCTCTGCAAATGTGCGACGTCAAGAGGCCTCT
JMFF027N17+           CTATGGCTCGCATCTTGAAGTAAGGAGTGCTCTGCAAATGTGCGACGTCAAGAGGCCTCT
                      ____________________________________________________________
consensus             CTATGGCTCGCATCTTGAAGTAAGGAGTGCTCTGCAAATGTGCGACGTCAAGAGGCCTCT
 
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rJMFF027N17-          TTTTGGTTTTTGGCGGCTGAGATAATGGAGGAGCAGACGGCGGTGCCGGANGAAGTGGCG
JMFF027N17+           TTTTGGTTTTTGGCGGCTGAGATAATGGAGGAGCAGACGGCGGTGCCGGAGGAAGTGGCG
                      ____________________________________________________________
consensus             TTTTGGTTTTTGGCGGCTGAGATAATGGAGGAGCAGACGGCGGTGCCGGAGGAAGTGGCG
 
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rJMFF027N17-          GATCAAGATGGGCAGTTTC                                         
JMFF027N17+           GATCAAGATGGGCAGTTTCGGGTGGGTGAGGAAGGGCGGTGTGGGTGATCGGTGGGTCAG
                      ____________________________________________________________
consensus             GATCAAGATGGGCAGTTTCGGGTGGGTGAGGAAGGGCGGTGTGGGTGATCGGTGGGTCAG
 
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JMFF027N17+           ATTCACCCATGAATAGTCCTTTCTGAATCTGAGGAGGCTTTTCCCAATTCAGTGTCAGTA
                      ____________________________________________________________
consensus             ATTCACCCATGAATAGTCCTTTCTGAATCTGAGGAGGCTTTTCCCAATTCAGTGTCAGTA
 
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JMFF027N17+           CTCAGTGAGAATCTAAAGATTCATTTCCTTACACAAGATATTGCAGATAGGCTAATCCCC
                      ____________________________________________________________
consensus             CTCAGTGAGAATCTAAAGATTCATTTCCTTACACAAGATATTGCAGATAGGCTAATCCCC