Contig 011553:  Sequence
BLAST Hits against nr-aa DB Show

Alignment

This contig is upended


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JMFN020M05+                                                      AACATGCATATAAGATC
rJMFF025I21-                      GGTGCCATTAGGAATGATCAAATCAGTGCACAACATGCATATAAGATC
                      ____________________________________________________________
consensus                         GGTGCCATTAGGAATGATCAAATCAGTGCACAACATGCATATAAGATC
 
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JMFN020M05+           ATTGTTTCTTCCATCAATATAACTCTATCAAAGCTCTCCATCCCAAAGCTCAGTAATGCT
rJMFF025I21-          ATTGTTTCTTCCATCAATATAACTCTATCAAAGCTCTCCATCCCAAAGCTCAGTAATGCT
                      ____________________________________________________________
consensus             ATTGTTTCTTCCATCAATATAACTCTATCAAAGCTCTCCATCCCAAAGCTCAGTAATGCT
 
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JMFN020M05+           CTTGTAAGGCCCATACTCTGAAGTGTAATCCATGCCAAGACACCCTCTGGCCTGTGAGAT
rJMFF025I21-          CTTGTAAGGCCCATACTCTGAAGTGTAATCCATGCCAAGACACCCTCTGGCCTGTGAGAT
                      ____________________________________________________________
consensus             CTTGTAAGGCCCATACTCTGAAGTGTAATCCATGCCAAGACACCCTCTGGCCTGTGAGAT
 
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JMFN020M05+           TTCACCAATCTTCTTAGCGTCTTCTTTGCTCAACTCCCAGTCAAATATCTCGAGATTCTG
rJMFF025I21-          TTCACCAATCTTCTTAGCGTCTTCTTTGCTCAACTCCCAGTCAAATATCTCGAGATTCTG
                      ____________________________________________________________
consensus             TTCACCAATCTTCTTAGCGTCTTCTTTGCTCAACTCCCAGTCAAATATCTCGAGATTCTG
 
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JMFN020M05+           CTTCATCCTCTCCTGGTTATAGCTCTTAACTATAATGCCAATGCCTTGTTCATAACCCCA
rJMFF025I21-          CTTCATCCTCTCCTGGTTATAGCTCTTAACTATAATGCCAATGCCTTGTTCATAACCCCA
                      ____________________________________________________________
consensus             CTTCATCCTCTCCTGGTTATAGCTCTTAACTATAATGCCAATGCCTTGTTCATAACCCCA
 
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JMFN020M05+           TCTTAAAGCAACCTGAGCAACAGATTTCCCTTTGGCCTTAGCTATTTCCTTTAGCACACC
rJMFF025I21-          TCTTAAAGCAACCTGAGCAACAGATTTCCCTTTGGCCTTAGCTATTTCCTTTAGCACACC
                      ____________________________________________________________
consensus             TCTTAAAGCAACCTGAGCAACAGATTTCCCTTTGGCCTTAGCTATTTCCTTTAGCACACC
 
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JMFN020M05+           AGACTCCATAACTCTGTTGGTGCCATAAAAAGTTCCTACAGAGCCCAGAGGACCATAGGC
rJMFF025I21-          AGACTCCATAACTCTGTTGGTGCCATAAAAAGTTCCTACAGAGCCCAGAGGACCATAGGC
JMFN037B07+                                                ACAGAGCCCAGAGGACCATAGGC
                      ____________________________________________________________
consensus             AGACTCCATAACTCTGTTGGTGCCATAAAAAGTTCCTACAGAGCCCAGAGGACCATAGGC
 
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JMFN020M05+           AACTACAAGAATCCCATGATCCTTACAGAAATCTCTCAGCTTCTTCTGCTGCCAACATGG
rJMFF025I21-          AACTACAAGAATCCCATGATCCTTACAGAAATCTCTCAGCTTCTTCTGCTGCCAACATGG
JMFN037B07+           AACTACAAGAATCCCATGATCCTTACAGAAATCTCTCAGCTTCTTCTGCTGCCAACATGG
                      ____________________________________________________________
consensus             AACTACAAGAATCCCATGATCCTTACAGAAATCTCTCAGCTTCTTCTGCTGCCAACATGG
 
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JMFN020M05+           ATTCACTTCCACTTGGTTGACAGCTGGGGTGATCTTTGCAGTAGACAAGATAGTTTGAAG
rJMFF025I21-          ATTCACTTCCACTTGGTTGACAGCTGGGGTGATCTTTGCAGTAGACAAGATAGTTTGAAG
JMFN037B07+           ATTCACTTCCACTTGGTTGACAGCTGGGGTGATCTTTGCAGTAGACAAGATAGTTTGAAG
                      ____________________________________________________________
consensus             ATTCACTTCCACTTGGTTGACAGCTGGGGTGATCTTTGCAGTAGACAAGATAGTTTGAAG
 
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JMFN020M05+           CTTCTTGCAGGAAAAATTGCTGACTCCAATAGCCTTAGTGAAGCCTTGATTTTGAGTCTC
rJMFF025I21-          CTTCTTGCAGGAAAAATTGCTGACTCCAATAGCCTTAGTGAAGCCTTGATTTTGAGTCTC
JMFN037B07+           CTTCTTGCAGGAAAAATTGCTGACTCCAATAGCCTTAGTGAAGCCTTGATTTTGAGTCTC
                      ____________________________________________________________
consensus             CTTCTTGCAGGAAAAATTGCTGACTCCAATAGCCTTAGTGAAGCCTTGATTTTGAGTCTC
 
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JMFN020M05+           TTCCATGGCTTCCCACACACCCTTGAAATCCATGGCTTCAAAGTCTTCTT          
rJMFF025I21-          TTCCATGGCTTCCCACACACCCTTGAAATCCATGGCTTCAAAGTCTTCTTTCTTTATTGG
JMFN037B07+           TTCCATGGCTTCCCACACACCCTTGAAATCCATGGCTTCAAAGTCTTCTTTCTTTATTGG
                      ____________________________________________________________
consensus             TTCCATGGCTTCCCACACACCCTTGAAATCCATGGCTTCAAAGTCTTCTTTCTTTATTGG
 
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rJMFF025I21-          GTATTCTGCAATCCCTTTTGAGCTCACTGGCCAGTGTATCAGGTAAAGATCAACATAACC
JMFN037B07+           GTATTCTGCAATCCCTTTTGAGCTCACTGGCCAGTGTATCAGGTAAAGATCAACATAACC
JMFS128A01+                          TTTTGAGCTCACTGGCCAGTGTATCAGGTAAAGATCAACATAACC
                      ____________________________________________________________
consensus             GTATTCTGCAATCCCTTTTGAGCTCACTGGCCAGTGTATCAGGTAAAGATCAACATAACC
 
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rJMFF025I21-          CACACCAAGATTTTGGAGAGTTTTCTTGATGGCAG                         
JMFN037B07+           CACACCAAGATTTTGGAGAGTTTTCTTGATGGCAGGAAGGACGGTTTGGGGGTGGGCATC
JMFS128A01+           CACACCAAGATTTTGGAGAGTTTTCTTGATGGCAGGAAGAACGGTTTGGGGGTGGGCATC
                      ____________________________________________________________
consensus             CACACCAAGATTTTGGAGAGTTTTCTTGATGGCAGGAAGGACGGTTTGGGGGTGGGCATC
 
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JMFN037B07+           ACTGCACCAGAGCTTGGAGGTGATGAAAAGCTCTTCTCTGGACTGAATTACTCCCTTTTC
JMFS128A01+           ACTGCACCAGAGCTTGGAGGTGATGAAAAGCTCTTCTCTGGACTGAATTACTCCCTTTTC
JMFF025I21+                                                      TGAATTACTCCCTTTTC
                      ____________________________________________________________
consensus             ACTGCACCAGAGCTTGGAGGTGATGAAAAGCTCTTCTCTGGACTGAATTACTCCCTTTTC
 
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JMFN037B07+           AATGGCTTCTTTTATGGCTTCACCCAGAGGCCGCTCTGAATTGTACAGAGCCGCCGTGTC
JMFS128A01+           AATGGCTTCTTTTATGGCTTCACCCAGAGGCCGCTCTGAATTGTACAGAGCCGCCGTGTC
JMFF025I21+           AATGGCTTCTTTTATGGCTTCACCCAGAGNCCGCTCTGAATTGTACAGANCCGCCGTGTC
                      ____________________________________________________________
consensus             AATGGCTTCTTTTATGGCTTCACCCAGAGGCCGCTCTGAATTGTACAGAGCCGCCGTGTC
 
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JMFN037B07+           AAAATGGCGGTACCCGACCTCTATTGCCTGGAGAACTGCTTTCTTCACGACCTCCGGTCC
JMFS128A01+           AAAATGGCGGTACCCGACCTCTATTGCCTGGAGAACTGCTTTCTTCACGACCTCCGGTCC
JMFF025I21+           AAAATGGCGGTACCCGACCTCTATTNCCTGGAGAACTGCTTTCTTCACGACCTCCGGTCC
                      ____________________________________________________________
consensus             AAAATGGCGGTACCCGACCTCTATTGCCTGGAGAACTGCTTTCTTCACGACCTCCGGTCC
 
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JMFN037B07+           GACCGGGGGGTCGGCCGCCGTGCCAAACCCCACTACGGGCATTCTCCGGCCGCCTTGGCC
JMFS128A01+           GACCGGGGGGTCGGCCGCCGTGCCAAACCCCACTACGGGCATTCTCCGGCCGCCTTGGCC
JMFF025I21+           GACCGGGGGGTCGGCCGCCGTGCCAAACCCCACTACGGGCATTCTCCGGCCGCCTTGGCC
                      ____________________________________________________________
consensus             GACCGGGGGGTCGGCCGCCGTGCCAAACCCCACTACGGGCATTCTCCGGCCGCCTTGGCC
 
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JMFN037B07+           GGAGCTCAGGTGGATTTCCG                                        
JMFS128A01+           GGAGCTCAGGTGGATTTCCGGGATAGCCATTTTTTATAGA                    
JMFF025I21+           GGAGCTCAGGTGGATTTCCGGGATAGCCATTTTTTATAGAGATTGTTGGGATGTGACACT
                      ____________________________________________________________
consensus             GGAGCTCAGGTGGATTTCCGGGATAGCCATTTTTTATAGAGATTGTTGGGATGTGACACT
 
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JMFF025I21+           ATTCTTGGGATGTGTTATTTATGTATGACAAACGGCTTCTGTTTGTCTTCCGCTAGATCG
                      ____________________________________________________________
consensus             ATTCTTGGGATGTGTTATTTATGTATGACAAACGGCTTCTGTTTGTCTTCCGCTAGATCG