Contig 011552:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF025G06Sequence535011552 (3)ref|XP_011090208.1|2e-42PREDICTED: elongation factor 1-beta-like isoform X1 [Sesamum indicum] ref|XP_01811011552 (3)emb|CDP09698.1|7e-66unnamed protein product [Coffea canephora]
JMFS016H05Sequence355011552 (3)emb|CDP09698.1|1e-40unnamed protein product [Coffea canephora]

Alignment

This contig is upended


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rJMFF025G06-                                    TCNATTAATAACTTTGACAAGTTCAACCAAGGTG
                      ____________________________________________________________
consensus                                       TCNATTAATAACTTTGACAAGTTCAACCAAGGTG
 
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rJMFF025G06-          TAATAGAATGAAAGTTAAGTTCCATTCATTCTAAAATCAGTCTAAGACCACAAAAAGAAA
                      ____________________________________________________________
consensus             TAATAGAATGAAAGTTAAGTTCCATTCATTCTAAAATCAGTCTAAGACCACAAAAAGAAA
 
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rJMFF025G06-          AACACGAGAAGAATAGCAGGGTAGGGTAAAGTATTTGATCAACAAAAACTCGCAAAATTA
                      ____________________________________________________________
consensus             AACACGAGAAGAATAGCAGGGTAGGGTAAAGTATTTGATCAACAAAAACTCGCAAAATTA
 
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rJMFF025G06-          CAGAATCCAAAAACGGACTCGATCCATTCTGAGCTCAGATTTTGTTGAAGGCAACAATGT
                      ____________________________________________________________
consensus             CAGAATCCAAAAACGGACTCGATCCATTCTGAGCTCAGATTTTGTTGAAGGCAACAATGT
 
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rJMFF025G06-          CACAGCTTTGCACATACTCACTGCAAGGCTCAACAGTTAGTTGATCCTCTATGAGGTCAT
                      ____________________________________________________________
consensus             CACAGCTTTGCACATACTCACTGCAAGGCTCAACAGTTAGTTGATCCTCTATGAGGTCAT
 
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rJMFF025G06-          CAACCGAGACAAGATCATCAACTATCGTAAGCATGATCTGCAATTTCTTAATTCCATAGC
                      ____________________________________________________________
consensus             CAACCGAGACAAGATCATCAACTATCGTAAGCATGATCTGCAATTTCTTAATTCCATAGC
 
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rJMFF025G06-          CAACTGGAACCAATTTTGATGCTCCCCACAGAAGTCCTTCCTTCTCAACCTTGCGAACAC
                      ____________________________________________________________
consensus             CAACTGGAACCAATTTTGATGCTCCCCACAGAAGTCCTTCCTTCTCAACCTTGCGAACAC
 
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rJMFF025G06-          ACTCTTCCAGCTTTTTCATGTCTGTCTCGTCATCCCAAGGCTTGATGTCCATAAGAACAG
JMFF025G06+                TCCAGCTTTTTCATGTCTGTCTCGTCATCCCAAGGCTTGATGTCCATAAGAACAG
                      ____________________________________________________________
consensus             ACTCTTCCAGCTTTTTCATGTCTGTCTCGTCATCCCAAGGCTTGATGTCCATAAGAACAG
 
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rJMFF025G06-          ATGACTTCCCACTCTCTTTCTTCTTGGTAGATGCCTTGGCTGCTGCTGCCCTCTCTTCAG
JMFF025G06+           ATGACTTCCCACTCTCTTTCTTCTTGGTAGATGCCTTGGCTGCTGCTGCCCTCTCTTCAG
                      ____________________________________________________________
consensus             ATGACTTCCCACTCTCTTTCTTCTTGGTAGATGCCTTGGCTGCTGCTGCCCTCTCTTCAG
 
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rJMFF025G06-          CTGCTTTCTTCTCCTCCTCTGTCTCTTCACCAAAGAGATCCATGTCATCATCATCATCGT
JMFS016H05+                                                       TCATCATCATCATCGT
JMFF025G06+           CTGCTTTCTTCTCCTCCTCTGTCTCTTCACCAAAGAGATCCATGTCATCATCATCATCGT
                      ____________________________________________________________
consensus             CTGCTTTCTTCTCCTCCTCTGTCTCTTCACCAAAGAGATCCATGTCATCATCATCATCGT
 
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rJMFF025G06-          CATCTACAACCTTAGCTGGTGCAGCTTCAGCTGGAGCATCTTGGCATCCGATTCTAACTC
JMFS016H05+           CATCTACAACCTTAGCTGGTGCAGCTTCAGCTGGAGCATCTTGGCATCCGATTCTAACTC
JMFF025G06+           CATCTACAACCTTAGCTGGTGCAGCTTCAGCTGGAGCATCTTGGCATCCGATTCTAACTC
                      ____________________________________________________________
consensus             CATCTACAACCTTAGCTGGTGCAGCTTCAGCTGGAGCATCTTGGCATCCGATTCTAACTC
 
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rJMFF025G06-          CAACAGCTTTCCCAGGGAAGCTTGCGGCGAGCTTGGTGGACACAGCATGGTACCATTTGC
JMFS016H05+           CAACAGCTTTCCCAGGGAAGCTTGCGGCGAGCTTGGTGGACACAGCATGGTACCATTTGC
JMFF025G06+           CAACAGCTTTCCCAGGGAAGCTTGCGGCGAGCTTGGTGGACACAGCATGGTACCATTTGC
                      ____________________________________________________________
consensus             CAACAGCTTTCCCAGGGAAGCTTGCGGCGAGCTTGGTGGACACAGCATGGTACCATTTGC
 
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rJMFF025G06-          TGGCATTCGGGAAGAGATCTGCGCTCGGCTGCTCCAAAACAGCAGCATATACCTTGACAT
JMFS016H05+           TGGCATTCGGGAAGAGATCTGCGCTCGGCTGCTCCAAAACAGCAGCATATACCTTGACAT
JMFF025G06+           TGGCATTCGGGAAGAGATCTGCGCTCGGCTGCTCCAAAACAGCAGCATATACCTTGACAT
                      ____________________________________________________________
consensus             TGGCATTCGGGAAGAGATCTGCGCTCGGCTGCTCCAAAACAGCAGCATATACCTTGACAT
 
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rJMFF025G06-          CATCCTTAGTCAATTGATCTCCAGAAATATAGCATTTTCCAGAGAGAA            
JMFS016H05+           CATCCTTAGTCAATTGATCTCCAGAAATATAGCATTTTCCAGAGAGAAACGCATCGAGAG
JMFF025G06+           CATCCTTAGTCAATTGATCTCCAGAAATATAGCATTTTCCAGAGAGAAACGCATCGAGAG
                      ____________________________________________________________
consensus             CATCCTTAGTCAATTGATCTCCAGAAATATAGCATTTTCCAGAGAGAAACGCATCGAGAG
 
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JMFS016H05+           ACTTGATGCCAGCCTCGGTGTGGAGATCTGAGAAGGTTACGGCCATTTTCTGAGAACTCC
JMFF025G06+           ACTTGATGCCAGCCTCGGTGTGGAGATCTGAGAAGGTTACGGCCATTTTCTGAGAACTCC
                      ____________________________________________________________
consensus             ACTTGATGCCAGCCTCGGTGTGGAGATCTGAGAAGGTTACGGCCATTTTCTGAGAACTCC
 
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JMFS016H05+           GAAGCCTCCGAGTGAGAGAGAGAGTGGGAGACTGCGAGT                     
JMFF025G06+           GAAGCCTCCGAGTGAGAGAGAGAGTGGGAGACTGCGAGTGTAAACCTTAGAACGCGAATT
                      ____________________________________________________________
consensus             GAAGCCTCCGAGTGAGAGAGAGAGTGGGAGACTGCGAGTGTAAACCTTAGAACGCGAATT