Contig 011546:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF013K08Sequence598011546 (3)gb|KDO65255.1|1e-72hypothetical protein CISIN_1g008242mg [Citrus sinensis]665012264 (2)gb|KDO65257.1|5e-64hypothetical protein CISIN_1g0445341mg, partial [Citrus sinensis]
JMFF024D04Sequence468011546 (3)gb|KDO65255.1|9e-48hypothetical protein CISIN_1g008242mg [Citrus sinensis]723012264 (2)gb|AJO70156.1|1e-70invertase 6 [Camellia sinensis]
JMFS095A11Sequence624011546 (3)gb|KDO65255.1|7e-81hypothetical protein CISIN_1g008242mg [Citrus sinensis]

Alignment

This contig is upended


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JMFS095A11+                              TTCCCGTCAGGGCCTCGCCAGGCGGTGGTGGGGTCCCTAAA
JMFF013K08+                                                                   TAAA
                      ____________________________________________________________
consensus                                TTCCCGTCAGGGCCTCGCCAGGCGGTGGTGGGGTCCCTAAA
 
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JMFS095A11+           CGACGTAGCATTGATCTTGTTGTAATGGTTTGGCGCGATTAATGGATTCCGGGGCGATTT
JMFF013K08+           CGACGTAGCATTGATCTTGTTGTAATGGTTTGGCGCGATTAATGGATTCCGGGGCGATTT
                      ____________________________________________________________
consensus             CGACGTAGCATTGATCTTGTTGTAATGGTTTGGCGCGATTAATGGATTCCGGGGCGATTT
 
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JMFS095A11+           TACCCATTCTTGGAGGTACGGGTCGGATGGGTTTCTGGGCACGGCCAAGTTCTGGACCTG
JMFF013K08+           TACCCATTCTTGGAGGTACGGGTCGGATGGGTTTCTGGGCACGGCCAAGTTCTGGACCTG
                      ____________________________________________________________
consensus             TACCCATTCTTGGAGGTACGGGTCGGATGGGTTTCTGGGCACGGCCAAGTTCTGGACCTG
 
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JMFS095A11+           CCGGTTTCTTGAATCCACGCCGGTGTAGAGCAACGCCGGCATGTTGTTCGGAAGAATCGT
JMFF013K08+           CCGGTTTCTTGAATCCACGCCGGTGTAGAGCAACGCCGGCATGTTGTTCGGAAGAATCGT
JMFF024D04+                       ATCCACGCCGGTGTAGAGCAACGCCGGCATGTTGTTCGGAAGAATCGT
                      ____________________________________________________________
consensus             CCGGTTTCTTGAATCCACGCCGGTGTAGAGCAACGCCGGCATGTTGTTCGGAAGAATCGT
 
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JMFS095A11+           CGCCGAGCCGGACCATGCACCGTTGATATCGGCCGCCGGCTGGGATGGAGAGAGTGCAGG
JMFF013K08+           CGCCGAGCCGGACCATGCACCGTTGATATCGGCCGCCGGCTGGGATGGAGAGAGTGCAGG
JMFF024D04+           CGCCGAGCCGGACCATGCACCGTTGATATCGGCCGCCGGCTGGGATGGAGAGAGTGCAGG
                      ____________________________________________________________
consensus             CGCCGAGCCGGACCATGCACCGTTGATATCGGCCGCCGGCTGGGATGGAGAGAGTGCAGG
 
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JMFS095A11+           GATATGAGCTCTCCAGTTAACTAGGTCTTTTGAAGTAGAGTGTCCCCATGATATCTTGCC
JMFF013K08+           GATATGAGCTCTCCAGTTAACTAGGTCTTTTGAAGTAGAGTGTCCCCATGATATCTTGCC
JMFF024D04+           GATATGAGCTCTCCAGTTAACTAGGTCTTTTGAAGTAGAGTGTCCCCATGATATCTTGCC
                      ____________________________________________________________
consensus             GATATGAGCTCTCCAGTTAACTAGGTCTTTTGAAGTAGAGTGTCCCCATGATATCTTGCC
 
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JMFS095A11+           AAAACTTGCACCTTTTGGGTTGTATTGGTAGAAGAAATGGTACACTCCTTTATAAACCAT
JMFF013K08+           AAAACTTGCACCTTTTGGGTTGTATTGGTAGAAGAAATGGTACACTCCTTTATAAACCAT
JMFF024D04+           AAAACTTGCACCTTTTGGGTTGTATTGGTAGAAGAAATGGTACACTCCTTTATAAACCAT
                      ____________________________________________________________
consensus             AAAACTTGCACCTTTTGGGTTGTATTGGTAGAAGAAATGGTACACTCCTTTATAAACCAT
 
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JMFS095A11+           AGGCCCATTTGGATCGTTCATCCAGTTCCTAGGAGGTTGGAAATGAAAAGAGGTTCTATA
JMFF013K08+           AGGCCCATTTGGATCGTTCATCCAGTTCCTAGGAGGTTGGAAATGAAAAGAGGTTCTATA
JMFF024D04+           AGGCCCATTTGGATCGTTCATCCAGTTCCTAGGAGGTTGGAAATGAAAAGAGGTTCTATA
                      ____________________________________________________________
consensus             AGGCCCATTTGGATCGTTCATCCAGTTCCTAGGAGGTTGGAAATGAAAAGAGGTTCTATA
 
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JMFS095A11+           AGTATGGTTGGGGTAAGGTGGTTGGAGAGCTTCAAGGTTTTGTAGAACAATGTGTGAGGC
JMFF013K08+           AGTATGGTTGGGGTAAGGTGGTTGGAGAGCTTCAAGGTTTTGTAGAACAATGTGTGAGGC
JMFF024D04+           AGTATGGTTGGGGTAAGGTGGTTGGAGAGCTTCAAGGTTTTGTAGAACAATGTGTGAGGC
                      ____________________________________________________________
consensus             AGTATGGTTGGGGTAAGGTGGTTGGAGAGCTTCAAGGTTTTGTAGAACAATGTGTGAGGC
 
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JMFS095A11+           TTGGGTTTCAACACCTCCATAGAGTACTAACAAGAGGAAAGAAATGGATAATAGCCAAAG
JMFF013K08+           TTGGGTTTCAACACCTCCATAGAGTACTAACAAGAGGAAAGAAATGGATAATAGCCAAAG
JMFF024D04+           TTGGGTTTCAACACCTCCATAGAGTACTAACAAGAGGAAAGAAATGGATAATAGCCAAAG
                      ____________________________________________________________
consensus             TTGGGTTTCAACACCTCCATAGAGTACTAACAAGAGGAAAGAAATGGATAATAGCCAAAG
 
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JMFS095A11+           GCTATATGTATCACCCATGTTTATGTAGTTAGTATAATAGCTA                 
JMFF013K08+           GCTATATGTATCACCCATGTTTATGTAGTTAGTATAATAGCTATGTGAGGGGGT      
JMFF024D04+           GCTATATGTATCACCCATGTTTATGTAGTTAGTATAATAGCTATGTGAGGGGGTGATGAC
                      ____________________________________________________________
consensus             GCTATATGTATCACCCATGTTTATGTAGTTAGTATAATAGCTATGTGAGGGGGTGATGAC