Contig 011544:  Sequence
BLAST Hits against nr-aa DB Show

clone5'-sequence3'-sequence
Seq.lengthcontigBestHitEvaluedescriptionlengthcontigBestHitEvaluedescription
JMFF023C07Sequence408011544 (2)gb|KJB78284.1|1e-09hypothetical protein B456_012G187800 [Gossypium raimondii]665004020 (3)ref|XP_010317101.1|7e-105PREDICTED: probable pectate lyase P59 [Solanum lycopersicum]
JMFN038P22Sequence624011544 (2)gb|AAB69758.1|7e-44putative pectate lyase Nt59 [Nicotiana tabacum]

Alignment

This contig is upended


. : . : . : . : . : . :
JMFN038P22+ AGGGTTCCGGGTTGGGGTTAGATGGATCATCGGCGT
                      ____________________________________________________________
consensus AGGGTTCCGGGTTGGGGTTAGATGGATCATCGGCGT
 
. : . : . : . : . : . :
JMFN038P22+ TGTCAGTAACGGTGTAGAAGTTGCCCAACTTGCCGCCTNTAGTTTTGTACCCAAACCCCA
                      ____________________________________________________________
consensus TGTCAGTAACGGTGTAGAAGTTGCCCAACTTGCCGCCTNTAGTTTTGTACCCAAACCCCA
 
. : . : . : . : . : . :
JMFN038P22+ AGGCGCAATCAGCCAACCTCTTCCGGTTGGTAGCCCAATCGGCGTGGCATCGCCAGCAAC
                      ____________________________________________________________
consensus AGGCGCAATCAGCCAACCTCTTCCGGTTGGTAGCCCAATCGGCGTGGCATCGCCAGCAAC
 
. : . : . : . : . : . :
JMFN038P22+ GATCGATCGGGTTTGTCGCATTACACGGCCCATGATACTTTTTTGAACCCAGAAGATGCC
                      ____________________________________________________________
consensus GATCGATCGGGTTTGTCGCATTACACGGCCCATGATACTTTTTTGAACCCAGAAGATGCC
 
. : . : . : . : . : . :
JMFN038P22+ GAGTTGTGTCGTTCCTCGTCACATCCTCAGCCTCAGCCTCAGCCTCAGCTACTGCTTCTG
JMFF023C07+ TCCTCGTCACATCCTCAGCCTCAGCCTCAGCCTCAGCTACTGCTTCTG
                      ____________________________________________________________
consensus GAGTTGTGTCGTTCCTCGTCACATCCTCAGCCTCAGCCTCAGCCTCAGCTACTGCTTCTG
 
. : . : . : . : . : . :
JMFN038P22+ ATAGTGTCCTTCGAACTTCGTGAATCAAGGATGCTGAAATGTTATGTGGATTGGGCTCAT
JMFF023C07+ ATAGTGTCCTTCGAACTTCGTGAATCAAGGATGCTGAAATGTTATGTGGATTGGGCTCAT
                      ____________________________________________________________
consensus ATAGTGTCCTTCGAACTTCGTGAATCAAGGATGCTGAAATGTTATGTGGATTGGGCTCAT
 
. : . : . : . : . : . :
JMFN038P22+ AAGCCTGTTGGGCATGTTCTATGGCTTCAGCTTCTCGCCTCCGCCACACCTCATCGTACT
JMFF023C07+ AAGCCTGTTGGGCATGTTCTATGGCTTCAGCTTCTCGCCTCCGCCACACCTCATCGTACT
                      ____________________________________________________________
consensus AAGCCTGTTGGGCATGTTCTATGGCTTCAGCTTCTCGCCTCCGCCACACCTCATCGTACT
 
. : . : . : . : . : . :
JMFN038P22+ CAGCAATGTGACCAACCGTTGCGGGGATTATAGCGCCAACACAAACCACCAACAACAACA
JMFF023C07+ CAGCAATGTGACCAACCGTTGCGGGGATTATAGCGCCAACACAAACCACCAACAACAACA
                      ____________________________________________________________
consensus CAGCAATGTGACCAACCGTTGCGGGGATTATAGCGCCAACACAAACCACCAACAACAACA
 
. : . : . : . : . : . :
JMFN038P22+ AACAATTATTTTTGTTAAATCCCTCCATTTTTTTTTCCTAAATATAAAAATAAATTATTA
JMFF023C07+ AACAATTATTTTTGTTAAATCCCTCCATTTTTTTTTCCTAAATATAAAAATAAATTATTA
                      ____________________________________________________________
consensus AACAATTATTTTTGTTAAATCCCTCCATTTTTTTTTCCTAAATATAAAAATAAATTATTA
 
. : . : . : . : . : . :
JMFN038P22+ TTTTGATAGGGGGTTGAACCGCTATTTTGGGTCCAACCCTTTTGAATTGAACCGACCAAA
JMFF023C07+ TTTTGATAGGGGGTTGAACCGCTATTTTGGGTCCAACCCTTTTGAATTGAACCGACCAAA
                      ____________________________________________________________
consensus TTTTGATAGGGGGTTGAACCGCTATTTTGGGTCCAACCCTTTTGAATTGAACCGACCAAA
 
. : . : . : . : . : . :
JMFN038P22+ CCTCAACTTTTCTTCTTATTCGGAGAGGTTTGATCGAACAACACTGTT
JMFF023C07+ CCTCAACTTTTCTTCTTATTCGGAGAGGTTTGATCGAACAACACTGTTTATTAAGTGATT
                      ____________________________________________________________
consensus CCTCAACTTTTCTTCTTATTCGGAGAGGTTTGATCGAACAACACTGTTTATTAAGTGATT